Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007908g0010 Nicotiana tabacum HOM05D013006 ORTHO05D000007 6.7e-165 583.9 294 100.0
Nitab4.5_0000676g0040 Nicotiana tabacum HOM05D013006 ORTHO05D000007 2.2e-27 127.1 98 67.3
Nitab4.5_0002372g0050 Nicotiana tabacum HOM05D013006 ORTHO05D000007 7.2e-26 122.1 118 51.7
Nitab4.5_0008416g0020 Nicotiana tabacum HOM05D013006 ORTHO05D000007 8.8e-24 115.2 208 37.0
Nitab4.5_0000606g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.7e-15 85.1 176 30.7
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-14 84.0 95 44.2
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-13 80.9 97 40.2
PGSC0003DMG400038711 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.4e-13 80.5 169 29.6
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-13 80.1 93 44.1
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-12 76.6 146 33.6
Nitab4.5_0000971g0170 Nicotiana tabacum HOM05D013006 ORTHO05D000007 5.9e-12 75.9 172 33.7
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-11 75.1 150 30.7
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-11 73.2 82 43.9
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-11 73.2 82 41.5
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.5e-11 72.4 97 39.2
Nitab4.5_0007752g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.5e-11 72.4 201 31.3
Nitab4.5_0004401g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-10 70.5 90 40.0
PGSC0003DMG400042385 Solanum tuberosum HOM05D000024 ORTHO05D000007 3.2e-10 70.1 146 30.1
Nitab4.5_0000002g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-10 68.9 160 29.4
Nitab4.5_0005113g0010 Nicotiana tabacum HOM05D013006 ORTHO05D000007 7.2e-10 68.9 52 63.5
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.4e-10 68.6 90 37.8
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.4e-10 68.6 81 43.2
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-09 68.2 203 29.6
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-09 67.4 129 34.9
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-09 67.0 91 39.6
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-09 67.0 90 38.9
Nitab4.5_0008738g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-09 67.0 122 36.1
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-09 66.6 166 31.3
Nitab4.5_0001569g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-09 66.2 87 39.1
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 4.7e-09 66.2 110 29.1
Nitab4.5_0003810g0050 Nicotiana tabacum HOM05D011951 ORTHO05D000007 6.1e-09 65.9 81 37.0
Sopen00g003400 Solanum pennellii HOM05D000024 ORTHO05D000007 6.1e-09 65.9 110 29.1
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 6.1e-09 65.9 187 28.9
Nitab4.5_0000087g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-09 65.5 115 33.0
Nitab4.5_0002416g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-09 65.5 79 40.5
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 8.0e-09 65.5 87 37.9
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-08 65.1 140 29.3
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-08 65.1 87 35.6
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-08 64.7 85 37.6
Nitab4.5_0009728g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-08 64.7 91 36.3
PGSC0003DMG400043810 Solanum tuberosum HOM05D019199 ORTHO05D000007 1.4e-08 64.7 93 37.6
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-08 64.3 179 29.6
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-08 64.3 169 32.0
Peaxi162Scf00460g00041 Petunia axillaris HOM05D000024 ORTHO05D000007 2.3e-08 63.9 112 35.7
Peaxi162Scf00700g00051 Petunia axillaris HOM05D000070 ORTHO05D002524 2.3e-08 63.9 88 39.8
Nitab4.5_0000102g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-08 63.5 132 31.8
Nitab4.5_0000329g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-08 63.5 129 33.3
Nitab4.5_0000175g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-08 63.2 131 28.2
Nitab4.5_0006025g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-08 63.2 116 32.8
Nitab4.5_0000103g0250 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-08 62.8 132 33.3
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 5.2e-08 62.8 113 30.1
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 6.7e-08 62.4 108 28.7
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-08 62.0 204 29.9
Nitab4.5_0000677g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-08 62.0 146 28.1
Nitab4.5_0002966g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-08 62.0 121 34.7
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-08 62.0 152 30.3
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-08 62.0 88 36.4
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 8.8e-08 62.0 228 22.8
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 8.8e-08 62.0 159 27.0
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 8.8e-08 62.0 84 31.0
Nitab4.5_0004489g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 61.6 87 36.8
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 1.2e-07 61.6 113 29.2
CAN.G1139.21 Capsicum annuum HOM05D000024 ORTHO05D000007 1.5e-07 61.2 87 34.5
Nitab4.5_0000041g0250 Nicotiana tabacum HOM05D028151 ORTHO05D000007 1.5e-07 61.2 121 35.5
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 61.2 173 26.0
Nitab4.5_0001757g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 61.2 88 36.4
Peaxi162Scf00284g00821 Petunia axillaris HOM05D000801 ORTHO05D000007 1.5e-07 61.2 79 38.0
PGSC0003DMG400027466 Solanum tuberosum HOM05D000801 ORTHO05D000007 1.5e-07 61.2 90 31.1
PGSC0003DMG400040220 Solanum tuberosum HOM05D000801 ORTHO05D000007 1.5e-07 61.2 122 32.0
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-07 60.8 89 29.2
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-07 60.5 139 28.1
Nitab4.5_0000370g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-07 60.5 119 32.8
Nitab4.5_0000961g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-07 60.5 82 36.6
Nitab4.5_0002284g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-07 60.5 119 34.5
Nitab4.5_0003058g0080 Nicotiana tabacum HOM05D013006 ORTHO05D000007 2.6e-07 60.5 42 73.8
Nitab4.5_0003058g0090 Nicotiana tabacum HOM05D013006 ORTHO05D000007 2.6e-07 60.5 42 73.8
Nitab4.5_0004658g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-07 60.5 102 31.4
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 2.6e-07 60.5 87 29.9
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 2.6e-07 60.5 169 28.4
PGSC0003DMG400034636 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.6e-07 60.5 83 33.7
Nitab4.5_0007267g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-07 60.1 104 35.6
Nitab4.5_0008161g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-07 60.1 91 34.1
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-07 60.1 121 26.4
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-07 59.7 161 29.2
Nitab4.5_0000422g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.7e-07 59.3 77 40.3
Nitab4.5_0003185g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.7e-07 59.3 162 27.8
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.7e-07 59.3 138 28.3
PGSC0003DMG400041868 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.7e-07 59.3 128 28.9
Nitab4.5_0003058g0070 Nicotiana tabacum HOM05D013006 ORTHO05D000007 7.5e-07 58.9 44 70.5
PSO561G0050 Papaver somniferum HOM05D002145 ORTHO05D000007 7.5e-07 58.9 118 32.2
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 7.5e-07 58.9 89 29.2
Nitab4.5_0000044g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000006 9.7e-07 58.5 145 31.7
Nitab4.5_0000068g0350 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.7e-07 58.5 179 25.7
Nitab4.5_0000659g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.7e-07 58.5 83 37.3
Nitab4.5_0003500g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.7e-07 58.5 185 27.6
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 9.7e-07 58.5 199 25.1
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 9.7e-07 58.5 128 29.7
PGSC0003DMG400036761 Solanum tuberosum HOM05D000024 ORTHO05D000007 9.7e-07 58.5 83 33.7
Actinidia35616 Actinidia chinensis HOM05D000003 ORTHO05D000007 1.3e-06 58.2 165 27.9
PSO561G0021 Papaver somniferum HOM05D002145 ORTHO05D000007 1.3e-06 58.2 126 31.0
Nitab4.5_0000227g0070 Nicotiana tabacum HOM05D011660 ORTHO05D000007 1.7e-06 57.8 78 39.7
Nitab4.5_0000274g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-06 57.8 197 25.4
PGSC0003DMG400041338 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.7e-06 57.8 83 31.3
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 57.4 135 28.1
Nitab4.5_0002909g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 57.4 142 31.0
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 57.4 82 34.1
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-06 57.4 165 27.3
PGSC0003DMG400044753 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.2e-06 57.4 111 31.5
Nitab4.5_0000023g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-06 57.0 164 28.0
Nitab4.5_0000031g0310 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-06 57.0 65 41.5
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-06 57.0 87 35.6
Nitab4.5_0001286g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-06 57.0 162 28.4
Nitab4.5_0001492g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-06 57.0 83 38.6
Nitab4.5_0014470g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-06 57.0 101 34.7
PSO675G8250 Papaver somniferum HOM05D001538 ORTHO05D000007 2.8e-06 57.0 124 27.4
PGSC0003DMG400010251 Solanum tuberosum HOM05D000801 ORTHO05D000007 2.8e-06 57.0 79 34.2
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 2.8e-06 57.0 87 35.6
Nitab4.5_0002314g0130 Nicotiana tabacum HOM05D013006 ORTHO05D000007 3.7e-06 56.6 52 53.8
PGSC0003DMG400038416 Solanum tuberosum HOM05D000801 ORTHO05D000007 3.7e-06 56.6 86 29.1
Nitab4.5_0001544g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.8e-06 56.2 185 30.8
Sopen07g013580 Solanum pennellii HOM05D000024 ORTHO05D000007 4.8e-06 56.2 80 38.8
PGSC0003DMG400034467 Solanum tuberosum HOM05D000801 ORTHO05D000007 4.8e-06 56.2 80 37.5
PGSC0003DMG400044928 Solanum tuberosum HOM05D000024 ORTHO05D000007 4.8e-06 56.2 83 32.5
PGSC0003DMG400047130 Solanum tuberosum HOM05D000024 ORTHO05D000007 4.8e-06 56.2 92 28.3
Nitab4.5_0000022g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-06 55.8 77 36.4
Nitab4.5_0000715g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-06 55.8 173 24.3
PGSC0003DMG400013062 Solanum tuberosum HOM05D000801 ORTHO05D016866 6.3e-06 55.8 85 32.9
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 6.3e-06 55.8 181 24.3
Aqoxy4G00529 Aquilegia oxysepala HOM05D000109 ORTHO05D000965 8.2e-06 55.5 81 29.6
Nitab4.5_0007212g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.2e-06 55.5 100 32.0
Peaxi162Scf00330g01114 Petunia axillaris HOM05D000801 ORTHO05D014243 8.2e-06 55.5 78 32.1
Peaxi162Scf00954g00225 Petunia axillaris HOM05D000801 ORTHO05D000007 8.2e-06 55.5 83 33.7
Sopen08g013110 Solanum pennellii HOM05D000024 ORTHO05D000007 8.2e-06 55.5 87 28.7
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 8.2e-06 55.5 69 39.1


User provided reference genes

Program Settings