Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 2.6e-74 282.0 139 100.0
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 1.5e-26 123.2 95 68.4
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 8.4e-25 117.5 111 60.4
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 1.9e-24 116.3 95 66.3
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 2.4e-24 115.9 95 66.3
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 7.1e-24 114.4 94 64.9
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 4.6e-23 111.7 94 62.8
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 1.0e-22 110.5 94 61.7
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 1.0e-22 110.5 95 62.1
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 2.3e-22 109.4 94 60.6
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 1.1e-21 107.1 94 61.7
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 1.9e-21 106.3 93 59.1
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 2.5e-21 105.9 94 60.6
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 3.3e-21 105.5 94 59.6
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 9.6e-21 104.0 94 57.4
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 9.6e-21 104.0 95 60.0
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 9.6e-21 104.0 94 58.5
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 1.6e-20 103.2 94 58.5
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 2.1e-20 102.8 94 58.5
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 2.8e-20 102.4 94 58.5
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 3.6e-20 102.1 94 58.5
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 3.6e-20 102.1 94 58.5
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 4.7e-20 101.7 94 59.6
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 4.7e-20 101.7 95 60.0
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 4.7e-20 101.7 93 57.0
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 6.2e-20 101.3 93 58.1
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 1.1e-19 100.5 94 58.5
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 1.1e-19 100.5 94 58.5
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 1.1e-19 100.5 94 58.5
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 1.1e-19 100.5 93 55.9
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 1.4e-19 100.1 94 59.6
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.4e-19 100.1 94 57.4
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 1.8e-19 99.8 94 59.6
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 3.1e-19 99.0 95 57.9
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 3.1e-19 99.0 89 56.2
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 5.2e-19 98.2 94 54.3
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 5.2e-19 98.2 94 57.4
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 5.2e-19 98.2 94 56.4
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 8.9e-19 97.4 93 58.1
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 8.9e-19 97.4 94 57.4
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.5e-18 96.7 94 57.4
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 1.5e-18 96.7 94 57.4
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 3.4e-18 95.5 99 54.5
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 3.4e-18 95.5 95 55.8
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 4.4e-18 95.1 94 58.5
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 4.4e-18 95.1 94 52.1
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 9.9e-18 94.0 95 53.7
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 1.3e-17 93.6 94 54.3
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 1.7e-17 93.2 94 55.3
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 1.7e-17 93.2 95 55.8
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 1.7e-17 93.2 95 52.6
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 1.7e-17 93.2 93 54.8
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 2.2e-17 92.8 95 54.7
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 2.2e-17 92.8 94 55.3
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 2.9e-17 92.4 143 42.0
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 4.9e-17 91.7 91 50.5
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 4.9e-17 91.7 94 55.3
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 4.9e-17 91.7 93 52.7
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 6.4e-17 91.3 85 55.3
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 8.4e-17 90.9 94 54.3
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 1.1e-16 90.5 94 54.3
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 1.1e-16 90.5 94 54.3
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 1.1e-16 90.5 94 54.3
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 1.1e-16 90.5 94 54.3
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 1.1e-16 90.5 94 54.3
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 1.4e-16 90.1 94 55.3
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 1.4e-16 90.1 105 52.4
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 1.9e-16 89.7 93 53.8
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 2.4e-16 89.4 95 53.7
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 3.2e-16 89.0 94 54.3
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 3.2e-16 89.0 94 54.3
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 3.2e-16 89.0 95 52.6
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 4.2e-16 88.6 94 53.2
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 7.1e-16 87.8 96 52.1
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 9.3e-16 87.4 134 42.5
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 2.1e-15 86.3 94 52.1
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 3.5e-15 85.5 96 51.0
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 4.6e-15 85.1 91 52.7
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 4.6e-15 85.1 94 52.1
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 6.0e-15 84.7 89 55.1
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 2.3e-14 82.8 89 56.2
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 5.1e-14 81.6 93 47.3
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 1.5e-13 80.1 70 62.9
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 3.3e-13 79.0 106 47.2
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 4.3e-13 78.6 79 55.7
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 5.6e-13 78.2 70 61.4
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 1.6e-12 76.6 92 52.2
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 3.6e-12 75.5 94 50.0
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 1.4e-11 73.6 165 33.9
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 1.4e-11 73.6 94 47.9
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 1.8e-11 73.2 75 53.3
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 1.8e-11 73.2 49 75.5
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 4.0e-11 72.0 49 67.3
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 6.9e-11 71.2 64 57.8
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 2.0e-10 69.7 49 67.3
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 9.9e-10 67.4 49 69.4
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 8.4e-09 64.3 65 50.8
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 8.4e-09 64.3 64 56.2
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 2.4e-08 62.8 73 50.7
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 3.2e-08 62.4 49 61.2
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 3.5e-07 58.9 64 46.9
CAN.G792.73 Capsicum annuum HOM05D003118 ORTHO05D009308 8.7e-06 54.3 42 61.9


User provided reference genes

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