Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007752g0020 Nicotiana tabacum HOM05D000894 ORTHO05D002325 5.2e-151 537.7 281 100.0
Nitab4.5_0001555g0040 Nicotiana tabacum HOM05D000894 ORTHO05D002325 2.2e-109 399.4 259 83.8
Nitab4.5_0010160g0020 Nicotiana tabacum HOM05D000894 ORTHO05D002325 3.9e-106 388.7 260 80.8
Nitab4.5_0006370g0010 Nicotiana tabacum HOM05D000894 ORTHO05D002325 4.3e-105 385.2 259 81.1
Nitab4.5_0005526g0020 Nicotiana tabacum HOM05D000894 ORTHO05D002325 2.8e-104 382.5 260 80.8
CAN.G1140.4 Capsicum annuum HOM05D000894 ORTHO05D020276 1.3e-24 117.9 235 38.7
CAN.G1140.2 Capsicum annuum HOM05D000894 ORTHO05D020276 9.6e-20 101.7 105 56.2
Dinv41431 Davidia involucrata HOM05D000894 ORTHO05D002325 8.1e-19 98.6 151 44.4
Hma1.2p1_0182F.1_g080380 Hydrangea macrophylla HOM05D000894 ORTHO05D002325 2.0e-17 94.0 159 41.5
MELO3C004438.2 Cucumis melo HOM05D000894 ORTHO05D002325 2.6e-17 93.6 112 45.5
CsaV3_2G003580 Cucumis sativus L. HOM05D000894 ORTHO05D002325 2.6e-17 93.6 112 45.5
ClCG02G017210 Citrullus lanatus HOM05D000894 ORTHO05D002325 3.4e-17 93.2 112 45.5
Atru.chr7.270 Acer truncatum HOM05D000894 ORTHO05D002325 9.9e-17 91.7 112 44.6
Gohir.D13G208200 Gossypium hirsutum HOM05D000894 ORTHO05D002325 9.9e-17 91.7 174 37.4
Gorai.013G237300 Gossypium raimondii HOM05D000894 ORTHO05D002325 9.9e-17 91.7 174 37.4
CiPaw.15G183300 Carya illinoinensis HOM05D000894 ORTHO05D002325 1.7e-16 90.9 191 36.1
Sed0018498 Sechium edule HOM05D000894 ORTHO05D002325 3.8e-16 89.7 115 44.3
Cpa.g.sc46.79 Carica papaya HOM05D000894 ORTHO05D002325 4.9e-16 89.4 194 35.6
Gohir.A06G051100 Gossypium hirsutum HOM05D000894 ORTHO05D002325 8.4e-16 88.6 168 38.1
Gohir.D06G050200 Gossypium hirsutum HOM05D000894 ORTHO05D002325 8.4e-16 88.6 168 38.1
Gorai.010G057100 Gossypium raimondii HOM05D000894 ORTHO05D002325 8.4e-16 88.6 168 38.1
Nn8g39683 Nelumbo nucifera HOM05D000894 ORTHO05D002325 1.4e-15 87.8 206 33.5
Prupe.7G256000 Prunus persica HOM05D000894 ORTHO05D002325 1.4e-15 87.8 205 31.7
COL.COLO4_24118 Corchorus olitorius HOM05D000894 ORTHO05D002325 1.9e-15 87.4 162 38.9
Duzib168G0818 Durio zibethinus HOM05D000894 ORTHO05D002325 2.4e-15 87.0 167 37.7
MD02G1016100 Malus domestica HOM05D000894 ORTHO05D002325 5.4e-15 85.9 120 40.0
Ciclev10007581m.g Citrus clementina HOM05D000894 ORTHO05D002325 1.2e-14 84.7 176 35.8
Lj4g0017820 Lotus japonicus HOM05D000894 ORTHO05D002325 1.2e-14 84.7 132 41.7
TAR636G0605 Trochodendron aralioides HOM05D000894 ORTHO05D002325 1.2e-14 84.7 269 29.7
Gohir.A13G202900 Gossypium hirsutum HOM05D000894 ORTHO05D002325 1.6e-14 84.3 192 34.4
GSVIVG01035929001 Vitis vinifera HOM05D000894 ORTHO05D002325 3.5e-14 83.2 102 45.1
Ah.14g078850 Amaranthus hybridus HOM05D000894 ORTHO05D002325 4.6e-14 82.8 129 41.9
CDE05G2532 Ceratophyllum demersum HOM05D000894 ORTHO05D002325 6.0e-14 82.4 264 29.9
Manes.14G137400 Manihot esculenta HOM05D000894 ORTHO05D002325 6.0e-14 82.4 197 32.0
Duzib150G0541 Durio zibethinus HOM05D000894 ORTHO05D002325 7.9e-14 82.0 112 43.8
MBI14_g03624_MAGBIO Magnolia biondii HOM05D000894 ORTHO05D002325 7.9e-14 82.0 203 34.0
RcHm_v2.0_Chr2g0086801 Rosa chinensis HOM05D000894 ORTHO05D002325 7.9e-14 82.0 213 31.9
TWI63G0674 Tripterygium wilfordii HOM05D000894 ORTHO05D002325 7.9e-14 82.0 137 38.7
AUR62041459 Chenopodium quinoa HOM05D000894 ORTHO05D002325 1.0e-13 81.6 125 42.4
Medtr4g116370 Medicago truncatula HOM05D000894 ORTHO05D002325 1.0e-13 81.6 120 40.0
AUR62011244 Chenopodium quinoa HOM05D000894 ORTHO05D002325 1.8e-13 80.9 103 45.6
Lalb_Chr07g0179451 Lupinus albus HOM05D000894 ORTHO05D002325 1.8e-13 80.9 125 38.4
EL10Ac8g18806 Beta vulgaris HOM05D000894 ORTHO05D002325 2.3e-13 80.5 112 42.9
CANSAT11G0306 Cannabis sativa HOM05D000894 ORTHO05D002325 2.3e-13 80.5 176 32.4
Dinv18181 Davidia involucrata HOM05D000894 ORTHO05D002325 2.3e-13 80.5 132 37.9
TWI34G1460 Tripterygium wilfordii HOM05D000894 ORTHO05D002325 2.3e-13 80.5 114 43.0
TAR625G0898 Trochodendron aralioides HOM05D000894 ORTHO05D002325 2.3e-13 80.5 152 36.8
vmacro11206 Vaccinium macrocarpon HOM05D000894 ORTHO05D002325 2.3e-13 80.5 128 39.1
Aqoxy7G03557 Aquilegia oxysepala HOM05D000894 ORTHO05D002325 3.0e-13 80.1 102 43.1
MD15G1160800 Malus domestica HOM05D000894 ORTHO05D002325 3.0e-13 80.1 207 30.4
HanXRQChr11g0353751 Helianthus annuus HOM05D000894 ORTHO05D002325 3.9e-13 79.7 120 40.8
Potri.006G059700 Populus trichocarpa HOM05D000894 ORTHO05D002325 3.9e-13 79.7 112 40.2
Thecc.09G140100 Theobroma cacao HOM05D000894 ORTHO05D002325 3.9e-13 79.7 161 36.6
Rhsim02G0205100 Rhododendron simsii HOM05D000894 ORTHO05D002325 5.1e-13 79.3 128 39.1
CSS0044780 Camellia sinensis var. sinensis HOM05D000894 ORTHO05D002325 6.7e-13 79.0 217 33.6
HanXRQChr01g0030611 Helianthus annuus HOM05D000894 ORTHO05D002325 6.7e-13 79.0 120 39.2
DCAR_006203 Daucus carota HOM05D000894 ORTHO05D002325 8.7e-13 78.6 138 38.4
TPR.G15790 Trifolium pratense HOM05D000894 ORTHO05D002325 8.7e-13 78.6 120 42.5
arahy.Tifrunner.gnm1.ann1.WU89NH Arachis hypogaea HOM05D000894 ORTHO05D002325 1.1e-12 78.2 118 41.5
CDE02G0189 Ceratophyllum demersum HOM05D000894 ORTHO05D002325 1.1e-12 78.2 125 41.6
Lalb_Chr13g0301261 Lupinus albus HOM05D000894 ORTHO05D002325 1.1e-12 78.2 127 35.4
Sc08g0005760 Simmondsia chinensis HOM05D000894 ORTHO05D002325 1.1e-12 78.2 121 44.6
arahy.Tifrunner.gnm1.ann1.K7E7DP Arachis hypogaea HOM05D000894 ORTHO05D002325 1.5e-12 77.8 118 40.7
Eucgr.C04105 Eucalyptus grandis HOM05D000894 ORTHO05D002325 1.9e-12 77.4 112 42.0
Glyma.17G106000 Glycine max HOM05D000894 ORTHO05D002325 1.9e-12 77.4 126 36.5
Oeu036215.1 Olea europaea HOM05D000894 ORTHO05D002325 1.9e-12 77.4 111 37.8
ECA248G3445 Erigeron canadensis HOM05D000894 ORTHO05D002325 2.5e-12 77.0 101 43.6
Lsat_1_v5_gn_1_43760 Lactuca sativa HOM05D000894 ORTHO05D002325 4.3e-12 76.3 133 39.1
Psat4g035360 Pisum sativum HOM05D000894 ORTHO05D002325 5.6e-12 75.9 126 35.7
Sp2g22260 Schrenkiella parvula HOM05D000894 ORTHO05D002325 7.4e-12 75.5 215 29.3
Nitab4.5_0002992g0030 Nicotiana tabacum HOM05D000894 ORTHO05D002325 9.6e-12 75.1 111 37.8
Phvul.003G173700 Phaseolus vulgaris HOM05D000894 ORTHO05D002325 9.6e-12 75.1 129 34.9
VMungo1215G1990 Vigna mungo HOM05D000894 ORTHO05D002325 9.6e-12 75.1 133 36.8
ATR0767G183 Amborella trichopoda HOM05D000894 ORTHO05D002325 1.3e-11 74.7 135 37.0
CSS0023523 Camellia sinensis var. sinensis HOM05D000894 ORTHO05D002325 1.3e-11 74.7 221 30.3
FAN28G0708 Fragaria x ananassa HOM05D000894 ORTHO05D001833 1.3e-11 74.7 162 34.0
Sabra06G0043100 Salix brachista HOM05D000894 ORTHO05D002325 1.6e-11 74.3 112 39.3
A06p35990 Brassica napus HOM05D000894 ORTHO05D002325 2.1e-11 73.9 203 32.0
BraA06t26523Z Brassica rapa HOM05D000894 ORTHO05D002325 2.1e-11 73.9 203 32.0
Carub.0006s2309 Capsella rubella HOM05D000894 ORTHO05D002325 2.1e-11 73.9 217 30.9
Potri.018G115500 Populus trichocarpa HOM05D000894 ORTHO05D002325 2.1e-11 73.9 106 40.6
BcaNung02285 Brassica carinata HOM05D000894 ORTHO05D002325 2.8e-11 73.6 213 30.5
C07p42610 Brassica napus HOM05D000894 ORTHO05D002325 2.8e-11 73.6 213 30.5
BolC7t44790H Brassica oleracea HOM05D000894 ORTHO05D002325 2.8e-11 73.6 213 30.5
FAN23G1845 Fragaria x ananassa HOM05D000894 ORTHO05D002325 2.8e-11 73.6 162 34.6
MSTRG.1732 Avicennia marina HOM05D000894 ORTHO05D002325 3.7e-11 73.2 103 39.8
FvH4_1g01820 Fragaria vesca HOM05D000894 ORTHO05D002325 3.7e-11 73.2 162 34.6
FAN19G1184 Fragaria x ananassa HOM05D000894 ORTHO05D002325 3.7e-11 73.2 162 34.6
FAN26G2867 Fragaria x ananassa HOM05D000894 ORTHO05D002325 3.7e-11 73.2 153 34.6
Ca_21622_v3 Cicer arietinum L. HOM05D000894 ORTHO05D002325 4.8e-11 72.8 120 39.2
Nitab4.5_0005958g0040 Nicotiana tabacum HOM05D000894 ORTHO05D002325 4.8e-11 72.8 120 35.8
AL6G36920 Arabidopsis lyrata HOM05D000894 ORTHO05D002325 6.2e-11 72.4 215 29.8
PGR102G3196 Punica granatum HOM05D000894 ORTHO05D002325 6.2e-11 72.4 103 41.7
SGA_v2.0_scaffold163G37960 Striga asiatica HOM05D000894 ORTHO05D002325 8.1e-11 72.0 134 35.1
Haze_19330 Corylus avellana HOM05D000894 ORTHO05D002325 1.1e-10 71.6 157 34.4
Peaxi162Scf00116g01011 Petunia axillaris HOM05D000894 ORTHO05D002325 1.1e-10 71.6 121 38.8
Sabra18G0098100 Salix brachista HOM05D000894 ORTHO05D001833 1.4e-10 71.2 245 29.8
Sabra18G0100100 Salix brachista HOM05D000894 ORTHO05D002325 1.4e-10 71.2 245 29.8
Aa31LG11G4460 Aethionema arabicum HOM05D000894 ORTHO05D002325 2.4e-10 70.5 136 36.8
AT5G25270 Arabidopsis thaliana HOM05D000894 ORTHO05D002325 2.4e-10 70.5 212 28.8
BcaNung04976 Brassica carinata HOM05D000894 ORTHO05D002325 3.1e-10 70.1 215 28.8
Manes.16G125500 Manihot esculenta HOM05D000894 ORTHO05D002325 3.1e-10 70.1 132 36.4
Thhalv10003804m.g Eutrema salsugineum HOM05D000894 ORTHO05D002325 4.0e-10 69.7 123 38.2
CARHR188210 Cardamine hirsuta HOM05D000894 ORTHO05D002325 5.3e-10 69.3 212 27.4
ATR0661G248 Amborella trichopoda HOM05D000894 ORTHO05D002325 9.0e-10 68.6 111 38.7
unitig_8.g5050 Utricularia gibba HOM05D000894 ORTHO05D002325 1.2e-09 68.2 100 41.0
Phvul.001G001400 Phaseolus vulgaris HOM05D000894 ORTHO05D002325 1.5e-09 67.8 110 37.3
Sopen06g012780 Solanum pennellii HOM05D000894 ORTHO05D002325 2.0e-09 67.4 103 37.9
PGSC0003DMG402016046 Solanum tuberosum HOM05D000894 ORTHO05D002325 2.0e-09 67.4 103 37.9
Cc08_g00280 Coffea canephora HOM05D000894 ORTHO05D002325 2.6e-09 67.0 125 36.0
GSVIVG01012875001 Vitis vinifera HOM05D000894 ORTHO05D002325 2.6e-09 67.0 129 35.7
Zm00001eb067410 Zea mays HOM05D000894 ORTHO05D002325 3.4e-09 66.6 228 29.4
Cpa.g.sc26.231 Carica papaya HOM05D000894 ORTHO05D002325 4.5e-09 66.2 118 36.4
Migut.E01818 Erythranthe guttata HOM05D000894 ORTHO05D002325 7.6e-09 65.5 127 33.1
CAN.G24.5 Capsicum annuum HOM05D000894 ORTHO05D002325 9.9e-09 65.1 102 38.2
Medtr1g026290 Medicago truncatula HOM05D000894 ORTHO05D002325 1.7e-08 64.3 104 37.5
arahy.Tifrunner.gnm1.ann1.U1RN9D Arachis hypogaea HOM05D000894 ORTHO05D002325 2.9e-08 63.5 106 35.8
Glyma.17G261600 Glycine max HOM05D000894 ORTHO05D002325 2.9e-08 63.5 104 37.5
Sc02g0008970 Simmondsia chinensis HOM05D000894 ORTHO05D002325 2.9e-08 63.5 233 27.0
Eucgr.F01713 Eucalyptus grandis HOM05D000894 ORTHO05D002325 3.8e-08 63.2 114 36.8
RcHm_v2.0_Chr6g0303971 Rosa chinensis HOM05D000894 ORTHO05D002325 6.4e-08 62.4 104 39.4
Duzib093G2095 Durio zibethinus HOM05D000894 ORTHO05D002325 8.4e-08 62.0 104 33.7
Lalb_Chr19g0131691 Lupinus albus HOM05D000894 ORTHO05D002325 8.4e-08 62.0 106 36.8
Sabra05G0191600 Salix brachista HOM05D000894 ORTHO05D002325 1.1e-07 61.6 131 32.8
HPP92_023805 Vanilla planifolia HOM05D000894 ORTHO05D002325 1.1e-07 61.6 101 35.6
Dinv15884 Davidia involucrata HOM05D000894 ORTHO05D002325 1.4e-07 61.2 124 33.9
Lj5g0012630 Lotus japonicus HOM05D000894 ORTHO05D002325 1.4e-07 61.2 104 37.5
Lalb_Chr03g0033601 Lupinus albus HOM05D000894 ORTHO05D002325 1.4e-07 61.2 106 36.8
TPR.G26410 Trifolium pratense HOM05D000894 ORTHO05D002325 1.4e-07 61.2 110 34.5
Ca_13492_v3 Cicer arietinum L. HOM05D000894 ORTHO05D002325 1.9e-07 60.8 104 35.6
Psat6g000200 Pisum sativum HOM05D000894 ORTHO05D002325 1.9e-07 60.8 135 32.6
MELO3C017008.2 Cucumis melo HOM05D000894 ORTHO05D002325 2.4e-07 60.5 227 23.3
CANSAT25G1636 Cannabis sativa HOM05D000894 ORTHO05D002325 3.2e-07 60.1 224 29.0
Gohir.A05G181200 Gossypium hirsutum HOM05D000894 ORTHO05D002325 3.2e-07 60.1 214 26.2
Nn5g30896 Nelumbo nucifera HOM05D000894 ORTHO05D002325 3.2e-07 60.1 125 31.2
Potri.005G247900 Populus trichocarpa HOM05D000894 ORTHO05D002325 3.2e-07 60.1 131 32.8
Sed0000541 Sechium edule HOM05D000894 ORTHO05D002325 3.2e-07 60.1 113 38.1
SGA_v2.0_scaffold19G08600 Striga asiatica HOM05D000894 ORTHO05D002325 3.2e-07 60.1 236 28.4
CsaV3_4G037100 Cucumis sativus L. HOM05D000894 ORTHO05D002325 4.2e-07 59.7 144 27.8
CDE09G0453 Ceratophyllum demersum HOM05D000894 ORTHO05D002325 5.5e-07 59.3 121 33.9
Glyma.14G223100 Glycine max HOM05D000894 ORTHO05D002325 5.5e-07 59.3 129 31.8
Lalb_Chr01g0008391 Lupinus albus HOM05D000894 ORTHO05D002325 5.5e-07 59.3 106 34.9
QL02p013593 Quercus lobata HOM05D000894 ORTHO05D002325 5.5e-07 59.3 104 34.6
Thecc.08G055200 Theobroma cacao HOM05D000894 ORTHO05D002325 5.5e-07 59.3 104 34.6
MD15G1004200 Malus domestica HOM05D000894 ORTHO05D002325 7.1e-07 58.9 120 35.8
HPP92_026892 Vanilla planifolia HOM05D000894 ORTHO05D002325 7.1e-07 58.9 130 31.5
Dinv39574 Davidia involucrata HOM05D000894 ORTHO05D002325 9.3e-07 58.5 124 33.9
FAN20G1564 Fragaria x ananassa HOM05D002849 ORTHO05D007186 9.3e-07 58.5 109 35.8
FAN27G2060 Fragaria x ananassa HOM05D002849 ORTHO05D007186 9.3e-07 58.5 109 35.8
Prupe.1G356800 Prunus persica HOM05D000894 ORTHO05D002325 9.3e-07 58.5 119 35.3
HPP92_003494 Vanilla planifolia HOM05D000894 ORTHO05D002325 9.3e-07 58.5 130 31.5
DCAR_013900 Daucus carota HOM05D000894 ORTHO05D002325 1.6e-06 57.8 104 38.5
Gorai.009G189700 Gossypium raimondii HOM05D000894 ORTHO05D002325 1.6e-06 57.8 104 33.7
Hund05131 Selenicereus undatus HOM05D000894 ORTHO05D002325 1.6e-06 57.8 104 34.6
COL.COLO4_21614 Corchorus olitorius HOM05D000894 ORTHO05D002325 2.1e-06 57.4 104 33.7
FAN15G0127 Fragaria x ananassa HOM05D000894 ORTHO05D002325 2.1e-06 57.4 109 34.9
Gohir.D05G256500 Gossypium hirsutum HOM05D000894 ORTHO05D002325 2.1e-06 57.4 111 38.7
PGR083G1464 Punica granatum HOM05D000894 ORTHO05D002325 2.1e-06 57.4 132 31.8
Atru.chr13.174 Acer truncatum HOM05D000894 ORTHO05D002325 2.7e-06 57.0 106 34.0
MSTRG.1129 Avicennia marina HOM05D000894 ORTHO05D002325 2.7e-06 57.0 104 33.7
CDE02G0614 Ceratophyllum demersum HOM05D000894 ORTHO05D002325 2.7e-06 57.0 120 33.3
FvH4_2g37770 Fragaria vesca HOM05D000894 ORTHO05D002325 2.7e-06 57.0 102 36.3
Lsat_1_v5_gn_4_126920 Lactuca sativa HOM05D000894 ORTHO05D002325 2.7e-06 57.0 102 37.3
Mapoly0067s0004 Marchantia polymorpha HOM05D000894 ORTHO05D002325 2.7e-06 57.0 126 31.7
Duzib041G0349 Durio zibethinus HOM05D000894 ORTHO05D002325 3.5e-06 56.6 255 25.9
Gohir.A05G254900 Gossypium hirsutum HOM05D000894 ORTHO05D002325 3.5e-06 56.6 104 33.7
Gohir.D05G184200 Gossypium hirsutum HOM05D000894 ORTHO05D002325 3.5e-06 56.6 104 32.7
SMO364G0659 Selaginella moellendorffii HOM05D000894 ORTHO05D002325 3.5e-06 56.6 112 32.1
EL10Ac1g02026 Beta vulgaris HOM05D000894 ORTHO05D002325 4.6e-06 56.2 137 30.7
AUR62036772 Chenopodium quinoa HOM05D000894 ORTHO05D002325 4.6e-06 56.2 103 35.9
Ciclev10000172m.g Citrus clementina HOM05D000894 ORTHO05D002325 4.6e-06 56.2 113 32.7
PSO675G7487 Papaver somniferum HOM05D000894 ORTHO05D002325 4.6e-06 56.2 125 32.0
Zm00001eb198450 Zea mays HOM05D000894 ORTHO05D002325 4.6e-06 56.2 98 36.7
Actinidia15476 Actinidia chinensis HOM05D000894 ORTHO05D002325 6.0e-06 55.8 118 34.7
CiPaw.07G141400 Carya illinoinensis HOM05D000894 ORTHO05D002325 6.0e-06 55.8 93 39.8
CiPaw.08G071200 Carya illinoinensis HOM05D000894 ORTHO05D002325 6.0e-06 55.8 104 35.6
AUR62013832 Chenopodium quinoa HOM05D000894 ORTHO05D002325 6.0e-06 55.8 104 35.6
Hma1.2p1_1260F.1_g271030 Hydrangea macrophylla HOM05D000894 ORTHO05D002325 6.0e-06 55.8 98 37.8
Rhsim06G0009500 Rhododendron simsii HOM05D000894 ORTHO05D002325 6.0e-06 55.8 106 33.0
Sed0000145 Sechium edule HOM05D000894 ORTHO05D002325 6.0e-06 55.8 106 34.0
Gorai.009G268000 Gossypium raimondii HOM05D000894 ORTHO05D002325 7.9e-06 55.5 104 33.7
PSO541G1981 Papaver somniferum HOM05D000894 ORTHO05D002325 7.9e-06 55.5 135 30.4


User provided reference genes

Program Settings