Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007732g0010 Nicotiana tabacum HOM05D004586 ORTHO05D005266 2.0e-253 879.0 583 100.0
Peaxi162Scf00485g00032 Petunia axillaris HOM05D004586 ORTHO05D005266 1.3e-74 285.0 564 39.9
Nitab4.5_0009520g0030 Nicotiana tabacum HOM05D004586 ORTHO05D005266 1.4e-65 255.0 506 38.7
Nitab4.5_0003018g0070 Nicotiana tabacum HOM05D004586 ORTHO05D005266 5.5e-62 243.0 477 38.6
Peaxi162Scf00007g02845 Petunia axillaris HOM05D004586 ORTHO05D005266 1.8e-60 238.0 171 71.9
Sopen07g028400 Solanum pennellii HOM05D004586 ORTHO05D005266 1.2e-59 235.3 166 72.9
Oeu025511.1 Olea europaea HOM05D004586 ORTHO05D005266 2.6e-59 234.2 188 64.4
Actinidia12449 Actinidia chinensis HOM05D004586 ORTHO05D005266 5.7e-59 233.0 173 68.2
CSS0039758 Camellia sinensis var. sinensis HOM05D004586 ORTHO05D005266 7.5e-59 232.6 171 70.8
SGA_v2.0_scaffold159G37633 Striga asiatica HOM05D004586 ORTHO05D005266 2.2e-58 231.1 169 68.0
Solyc07g054460.4 Solanum lycopersicum HOM05D004586 ORTHO05D005266 4.8e-58 229.9 511 45.4
Lj1C734T7 Lonicera japonica HOM05D004586 ORTHO05D005266 8.3e-58 229.2 170 69.4
Actinidia09891 Actinidia chinensis HOM05D004586 ORTHO05D005266 1.8e-57 228.0 169 67.5
HanXRQChr05g0140481 Helianthus annuus HOM05D004586 ORTHO05D005266 7.0e-57 226.1 171 66.7
HanXRQChr14g0441421 Helianthus annuus HOM05D004586 ORTHO05D005266 7.0e-57 226.1 171 66.1
SGA_v2.0_scaffold49G18309 Striga asiatica HOM05D004586 ORTHO05D005266 9.1e-57 225.7 201 59.2
ECA234G1777 Erigeron canadensis HOM05D004586 ORTHO05D005266 1.2e-56 225.3 175 65.7
PGSC0003DMG400018364 Solanum tuberosum HOM05D004586 ORTHO05D005266 1.6e-56 224.9 486 38.1
MSTRG.14187 Avicennia marina HOM05D004586 ORTHO05D005266 4.5e-56 223.4 193 62.2
Lj3g0023901 Lotus japonicus HOM05D004586 ORTHO05D005266 6.5e-55 219.5 169 63.9
Migut.H01030 Erythranthe guttata HOM05D004586 ORTHO05D005266 8.5e-55 219.2 171 66.1
CAN.G78.83 Capsicum annuum HOM05D004586 ORTHO05D005266 1.5e-54 218.4 140 75.7
Manes.12G079600 Manihot esculenta HOM05D004586 ORTHO05D005266 4.2e-54 216.9 190 62.6
Eucgr.B03848 Eucalyptus grandis HOM05D004586 ORTHO05D005266 9.5e-54 215.7 204 58.3
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 1.6e-53 214.9 170 65.3
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 1.6e-53 214.9 170 65.3
QL10p048480 Quercus lobata HOM05D004586 ORTHO05D005266 2.1e-53 214.5 136 76.5
Cc00_g21120 Coffea canephora HOM05D004586 ORTHO05D005266 4.7e-53 213.4 188 63.3
vmacro12267 Vaccinium macrocarpon HOM05D004586 ORTHO05D005266 6.1e-53 213.0 195 59.5
THA.LOC104826023 Tarenaya hassleriana HOM05D004586 ORTHO05D005266 2.3e-52 211.1 189 60.8
TWI36G0730 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 2.3e-52 211.1 204 56.9
FAN02G1766 Fragaria x ananassa HOM05D004586 ORTHO05D005266 3.0e-52 210.7 194 56.7
FAN14G4866 Fragaria x ananassa HOM05D004586 ORTHO05D005266 3.0e-52 210.7 176 60.8
MD09G1092000 Malus domestica HOM05D004586 ORTHO05D005266 3.0e-52 210.7 191 59.2
CANSAT64G2104 Cannabis sativa HOM05D004586 ORTHO05D005266 4.0e-52 210.3 182 59.9
Cfa014556 Carpinus fangiana HOM05D004586 ORTHO05D005266 4.0e-52 210.3 144 72.9
TAR627G0949 Trochodendron aralioides HOM05D004586 ORTHO05D005266 6.8e-52 209.5 163 65.6
SalBow1G4799 Salvia bowleyana HOM05D004586 ORTHO05D005266 8.8e-52 209.1 498 33.9
SalBow7G1236 Salvia bowleyana HOM05D004586 ORTHO05D005266 1.5e-51 208.4 496 33.9
Sed0007770 Sechium edule HOM05D004586 ORTHO05D005266 1.5e-51 208.4 173 64.2
CsaV3_2G036510 Cucumis sativus L. HOM05D004586 ORTHO05D005266 2.0e-51 208.0 174 64.4
FAN09G2343 Fragaria x ananassa HOM05D004586 ORTHO05D005266 2.0e-51 208.0 194 56.7
PSO541G0834 Papaver somniferum HOM05D004586 ORTHO05D005266 2.6e-51 207.6 164 62.8
Haze_13103 Corylus avellana HOM05D004586 ORTHO05D005266 3.4e-51 207.2 144 72.9
MBI02_g10548_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 3.4e-51 207.2 165 64.2
RcHm_v2.0_Chr2g0162091 Rosa chinensis HOM05D004586 ORTHO05D005266 3.4e-51 207.2 171 63.2
Cpa.g.sc34.112 Carica papaya HOM05D004586 ORTHO05D005266 4.4e-51 206.8 155 64.5
FvH4_6g44910 Fragaria vesca HOM05D004586 ORTHO05D005266 5.7e-51 206.5 194 56.2
FAN05G3704 Fragaria x ananassa HOM05D004586 ORTHO05D005266 5.7e-51 206.5 194 55.7
Sabra13G0117000 Salix brachista HOM05D004586 ORTHO05D005266 7.5e-51 206.1 186 60.2
GSVIVG01030569001 Vitis vinifera HOM05D004586 ORTHO05D005266 7.5e-51 206.1 150 69.3
PSO675G0516 Papaver somniferum HOM05D004586 ORTHO05D005266 9.8e-51 205.7 164 62.8
Atru.chr6.3049 Acer truncatum HOM05D004586 ORTHO05D005266 1.3e-50 205.3 207 57.0
BraA10t42477Z Brassica rapa HOM05D000330 ORTHO05D000209 2.8e-50 204.1 177 59.3
Glyma.12G108100 Glycine max HOM05D004586 ORTHO05D005266 2.8e-50 204.1 155 65.8
ClCG02G017410 Citrullus lanatus HOM05D004586 ORTHO05D005266 3.7e-50 203.8 178 61.8
Prupe.3G233000 Prunus persica HOM05D004586 ORTHO05D005266 3.7e-50 203.8 126 74.6
Sc12g0002770 Simmondsia chinensis HOM05D004586 ORTHO05D005266 4.9e-50 203.4 203 56.7
MELO3C003861.2 Cucumis melo HOM05D004586 ORTHO05D005266 8.3e-50 202.6 174 62.1
Ciclev10014470m.g Citrus clementina HOM05D004586 ORTHO05D005266 1.1e-49 202.2 202 56.4
Thhalv10006867m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 1.4e-49 201.8 182 58.2
MD17G1081900 Malus domestica HOM05D004586 ORTHO05D005266 1.4e-49 201.8 182 56.6
VMungo1127G2109 Vigna mungo HOM05D004586 ORTHO05D005266 1.4e-49 201.8 162 64.2
Glyma.06G297000 Glycine max HOM05D004586 ORTHO05D005266 2.4e-49 201.1 154 63.0
BcaC05g24523 Brassica carinata HOM05D004586 ORTHO05D005266 3.1e-49 200.7 181 57.5
A10p02080 Brassica napus HOM05D000330 ORTHO05D005266 3.1e-49 200.7 181 57.5
BolC5t28977H Brassica oleracea HOM05D004586 ORTHO05D005266 3.1e-49 200.7 181 57.5
Lsat_1_v5_gn_4_68860 Lactuca sativa HOM05D004586 ORTHO05D005266 3.1e-49 200.7 164 63.4
Phvul.011G112400 Phaseolus vulgaris HOM05D004586 ORTHO05D005266 5.4e-49 199.9 124 75.0
Potri.013G145300 Populus trichocarpa HOM05D004586 ORTHO05D005266 7.0e-49 199.5 141 69.5
Sp1g02460 Schrenkiella parvula HOM05D004586 ORTHO05D005266 7.0e-49 199.5 181 58.6
Duzib106G1111 Durio zibethinus HOM05D004586 ORTHO05D005266 9.2e-49 199.1 211 52.1
CiPaw.03G171000 Carya illinoinensis HOM05D004586 ORTHO05D005266 1.6e-48 198.4 130 73.1
Carub.0001s0267 Capsella rubella HOM05D004586 ORTHO05D005266 2.0e-48 198.0 187 56.1
PGR042G3101 Punica granatum HOM05D004586 ORTHO05D005266 2.0e-48 198.0 190 56.3
AT1G03530 Arabidopsis thaliana HOM05D004586 ORTHO05D005266 2.7e-48 197.6 186 57.0
AUR62035735 Chenopodium quinoa HOM05D004586 ORTHO05D005266 2.7e-48 197.6 207 53.6
Gohir.D13G149100 Gossypium hirsutum HOM05D004586 ORTHO05D005266 2.7e-48 197.6 156 62.8
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea HOM05D004586 ORTHO05D005266 3.5e-48 197.2 161 62.1
Gorai.013G166800 Gossypium raimondii HOM05D004586 ORTHO05D005266 3.5e-48 197.2 156 62.8
C05p01990 Brassica napus HOM05D004586 ORTHO05D005266 4.5e-48 196.8 181 56.9
COL.COLO4_13701 Corchorus olitorius HOM05D004586 ORTHO05D005266 5.9e-48 196.4 152 64.5
BcaB02g06919 Brassica carinata HOM05D004586 ORTHO05D005266 7.8e-48 196.1 152 63.2
Aa31LG1G20890 Aethionema arabicum HOM05D004586 ORTHO05D005266 1.0e-47 195.7 158 62.0
EL10As5g23555 Beta vulgaris HOM05D004586 ORTHO05D005266 1.0e-47 195.7 192 54.7
Lalb_Chr01g0005391 Lupinus albus HOM05D004586 ORTHO05D005266 1.0e-47 195.7 155 63.9
AL1G13040 Arabidopsis lyrata HOM05D004586 ORTHO05D005266 1.7e-47 194.9 182 56.6
COL.COLO4_08510 Corchorus olitorius HOM05D004586 ORTHO05D005266 2.3e-47 194.5 138 68.1
Potri.019G104400 Populus trichocarpa HOM05D004586 ORTHO05D005266 3.8e-47 193.7 132 72.0
Rhsim06G0149700 Rhododendron simsii HOM05D004586 ORTHO05D005266 5.0e-47 193.4 130 70.0
TPR.G21660 Trifolium pratense HOM05D004586 ORTHO05D005266 5.0e-47 193.4 150 65.3
Ca_27565_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 6.6e-47 193.0 163 61.3
TWI18G0514 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 6.6e-47 193.0 202 51.5
MELO3C021880.2 Cucumis melo HOM05D004586 ORTHO05D005266 1.1e-46 192.2 124 75.8
Gohir.A13G144300 Gossypium hirsutum HOM05D004586 ORTHO05D005266 1.5e-46 191.8 156 60.9
Medtr0072s0050 Medicago truncatula HOM05D004586 ORTHO05D005266 1.5e-46 191.8 149 64.4
unitig_26.g9937 Utricularia gibba HOM05D004586 ORTHO05D005266 4.3e-46 190.3 186 53.8
Thhalv10024822m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 7.3e-46 189.5 152 62.5
Lj3g0000702 Lotus japonicus HOM05D004586 ORTHO05D005266 1.2e-45 188.7 218 53.2
Duzib052G0504 Durio zibethinus HOM05D004586 ORTHO05D005266 2.8e-45 187.6 459 39.7
Thecc.02G173500 Theobroma cacao HOM05D004586 ORTHO05D005266 2.8e-45 187.6 478 37.0
CARHR002890 Cardamine hirsuta HOM05D004586 ORTHO05D005266 3.6e-45 187.2 190 53.7
ATR0693G407 Amborella trichopoda HOM05D004586 ORTHO05D005266 6.1e-45 186.4 164 60.4
Ca_20687_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 6.1e-45 186.4 135 66.7
TAR629G0893 Trochodendron aralioides HOM05D004586 ORTHO05D005266 6.1e-45 186.4 167 58.1
PSO384G2677 Papaver somniferum HOM05D004586 ORTHO05D005266 8.0e-45 186.0 135 65.2
SHI10466 Sapria himalayana HOM05D004586 ORTHO05D005266 1.8e-44 184.9 248 46.0
Psat0s4261g0040 Pisum sativum HOM05D004586 ORTHO05D005266 3.0e-44 184.1 161 60.2
Os05g0502800 Oryza sativa ssp. japonica HOM05D004586 ORTHO05D005266 4.0e-44 183.7 136 64.0
Ah.01g003940 Amaranthus hybridus HOM05D004586 ORTHO05D005266 5.2e-44 183.3 151 60.9
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea HOM05D004586 ORTHO05D005266 6.8e-44 183.0 166 58.4
Nn1g03938 Nelumbo nucifera HOM05D004586 ORTHO05D005266 2.6e-43 181.0 163 58.9
C08p00660 Brassica napus HOM05D004586 ORTHO05D005266 3.4e-43 180.6 191 53.4
A08p37340 Brassica napus HOM05D004586 ORTHO05D005266 2.2e-42 177.9 185 51.9
BraA08t35631Z Brassica rapa HOM05D004586 ORTHO05D005266 2.2e-42 177.9 188 52.1
CAN.G996.7 Capsicum annuum HOM05D004586 ORTHO05D005266 3.7e-42 177.2 163 58.3
AUR62000198 Chenopodium quinoa HOM05D004586 ORTHO05D005266 1.1e-41 175.6 171 55.0
Zm00001eb292050 Zea mays HOM05D004586 ORTHO05D005266 2.4e-41 174.5 157 59.2
Medtr2g090095 Medicago truncatula HOM05D004586 ORTHO05D005266 3.2e-41 174.1 190 50.5
HPP92_014062 Vanilla planifolia HOM05D004586 ORTHO05D005266 5.4e-41 173.3 198 51.0
TPR.G27075 Trifolium pratense HOM05D004586 ORTHO05D005266 2.7e-40 171.0 172 52.9
Hund09647 Selenicereus undatus HOM05D004586 ORTHO05D005266 3.5e-40 170.6 120 70.8
BolC8t46864H Brassica oleracea HOM05D004586 ORTHO05D005266 1.3e-39 168.7 186 50.0
CDE02G0135 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 3.9e-39 167.2 122 64.8
SEGI_15076 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 1.5e-38 165.2 194 46.4
arahy.Tifrunner.gnm1.ann1.IS01QF Arachis hypogaea HOM05D004586 ORTHO05D005266 5.6e-38 163.3 165 53.3
Psat5g270160 Pisum sativum HOM05D004586 ORTHO05D005266 1.2e-37 162.2 217 46.5
arahy.Tifrunner.gnm1.ann1.7D4Z5S Arachis hypogaea HOM05D004586 ORTHO05D005266 6.2e-37 159.8 202 47.5
DCAR_019194 Daucus carota HOM05D004586 ORTHO05D005266 5.8e-35 153.3 98 72.4
SMO137G0274 Selaginella moellendorffii HOM05D004586 ORTHO05D005266 4.6e-32 143.7 123 51.2
CDE02G4059 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 6.0e-32 143.3 106 65.1
Lalb_Chr22g0356411 Lupinus albus HOM05D004586 ORTHO05D005266 5.0e-31 140.2 160 50.0
CBR_g12767 Chara braunii HOM05D004586 ORTHO05D005266 1.1e-30 139.0 137 51.8
Pp3c14_14050 Physcomitrium patens HOM05D004586 ORTHO05D005266 3.3e-30 137.5 163 46.6
BcaB08g36102 Brassica carinata HOM05D004586 ORTHO05D005266 5.6e-30 136.7 125 57.6
Mapoly0108s0039 Marchantia polymorpha HOM05D004586 ORTHO05D005266 2.1e-29 134.8 148 49.3
BcaB01g00913 Brassica carinata HOM05D004586 ORTHO05D005266 4.7e-29 133.7 119 58.8
Dinv15471 Davidia involucrata HOM05D004586 ORTHO05D005266 4.0e-28 130.6 82 73.2
Pp3c10_10230 Physcomitrium patens HOM05D004586 ORTHO05D005266 5.2e-28 130.2 124 51.6
AagrBONN_evm.TU.Sc2ySwM_117.2920 Anthoceros agrestis HOM05D004586 ORTHO05D005266 9.2e-25 119.4 140 43.6
SEGI_36208 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 1.7e-23 115.2 93 53.8
MBI02_g27225_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 1.5e-19 102.1 165 42.4
PSO339G0898 Papaver somniferum HOM05D004586 ORTHO05D005266 7.8e-16 89.7 105 45.7
Medtr7g116780 Medicago truncatula HOM05D004586 ORTHO05D005266 5.1e-15 87.0 71 59.2
Cre10.g467100 Chlamydomonas reinhardtii HOM05D004586 ORTHO05D005266 1.7e-10 72.0 94 36.2
Dinv01388 Davidia involucrata HOM05D033017 ORTHO05D005266 2.4e-09 68.2 112 41.1
AL2G23840 Arabidopsis lyrata HOM05D020923 ORTHO05D021440 2.7e-08 64.7 83 45.8
Psat0s10217g0080 Pisum sativum HOM05D004586 ORTHO05D005266 2.5e-06 58.2 47 59.6
Carub.0006s3370 Capsella rubella HOM05D020923 ORTHO05D021440 3.3e-06 57.8 96 39.6
MCO05G032 Micromonas commoda HOM05D004586 ORTHO05D005266 5.6e-06 57.0 140 30.0
SEGI_25704 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 7.3e-06 56.6 107 40.2


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