Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.4e-82 309.7 168 100.0
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.6e-78 294.7 168 94.6
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.3e-67 260.0 170 81.8
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 3.7e-67 258.5 168 82.7
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 9.0e-66 253.8 168 81.5
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 4.5e-65 251.5 168 80.4
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 2.2e-64 249.2 168 79.8
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 2.2e-64 249.2 167 76.6
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 6.5e-64 247.7 168 78.0
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 6.5e-64 247.7 169 79.9
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 6.5e-64 247.7 168 79.8
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 1.1e-63 246.9 168 78.0
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 1.4e-63 246.5 172 80.2
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 1.4e-63 246.5 170 80.0
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 2.5e-63 245.7 168 78.6
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 2.5e-63 245.7 168 78.6
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 4.2e-63 245.0 168 76.8
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 4.2e-63 245.0 168 76.8
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 4.2e-63 245.0 170 76.5
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 5.5e-63 244.6 168 76.2
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 5.5e-63 244.6 168 76.2
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 5.5e-63 244.6 168 76.8
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 7.2e-63 244.2 169 78.7
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 7.2e-63 244.2 168 76.8
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 1.6e-62 243.0 171 78.4
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 2.1e-62 242.7 169 75.7
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 2.7e-62 242.3 168 76.8
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 3.5e-62 241.9 170 75.9
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 4.6e-62 241.5 168 76.2
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 1.0e-61 240.4 168 76.8
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 1.3e-61 240.0 169 76.3
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 1.3e-61 240.0 169 77.5
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 1.8e-61 239.6 168 76.8
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 2.3e-61 239.2 168 77.4
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 3.0e-61 238.8 168 75.0
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 3.9e-61 238.4 168 75.0
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 5.1e-61 238.0 168 75.6
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 8.7e-61 237.3 170 75.9
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 8.7e-61 237.3 168 76.2
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 1.1e-60 236.9 169 76.3
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 1.1e-60 236.9 168 74.4
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 1.5e-60 236.5 169 77.5
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 1.9e-60 236.1 168 75.0
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 1.9e-60 236.1 169 75.1
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 1.9e-60 236.1 168 73.8
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 2.5e-60 235.7 169 75.7
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 3.3e-60 235.3 164 76.8
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 3.3e-60 235.3 170 74.1
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 5.7e-60 234.6 162 77.8
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 9.7e-60 233.8 168 72.0
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 1.3e-59 233.4 169 74.0
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 1.3e-59 233.4 169 73.4
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 2.2e-59 232.6 170 74.1
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 2.2e-59 232.6 169 75.7
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 3.7e-59 231.9 164 76.8
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 4.8e-59 231.5 168 74.4
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 6.3e-59 231.1 172 72.1
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 6.3e-59 231.1 173 75.1
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 8.2e-59 230.7 169 74.6
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 1.1e-58 230.3 170 73.5
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 1.8e-58 229.6 169 73.4
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 1.8e-58 229.6 168 72.6
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 1.8e-58 229.6 169 72.2
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 4.1e-58 228.4 170 72.9
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 4.1e-58 228.4 169 73.4
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 1.2e-57 226.9 171 71.3
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.5e-57 226.5 169 74.0
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 2.0e-57 226.1 169 70.4
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.6e-57 225.7 170 74.1
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 2.6e-57 225.7 165 73.3
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 1.0e-56 223.8 169 72.2
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 1.0e-56 223.8 168 72.0
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 1.3e-56 223.4 169 72.2
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 1.3e-56 223.4 169 72.2
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 1.3e-56 223.4 169 72.2
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 2.2e-56 222.6 176 71.6
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 2.2e-56 222.6 176 71.6
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 2.9e-56 222.2 171 71.9
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 3.8e-56 221.9 168 72.0
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 3.8e-56 221.9 168 72.0
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 5.0e-56 221.5 168 70.8
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 5.0e-56 221.5 164 71.3
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 6.5e-56 221.1 171 67.8
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 8.5e-56 220.7 169 71.6
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 8.5e-56 220.7 169 72.2
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 8.5e-56 220.7 168 68.5
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 1.1e-55 220.3 169 70.4
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 1.1e-55 220.3 169 71.6
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 1.4e-55 219.9 169 71.0
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 1.4e-55 219.9 169 71.0
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 1.9e-55 219.5 168 67.3
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 1.9e-55 219.5 168 69.0
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 3.2e-55 218.8 168 72.0
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 3.2e-55 218.8 168 72.0
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 3.2e-55 218.8 168 69.6
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 3.2e-55 218.8 169 69.8
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 4.2e-55 218.4 168 71.4
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 5.5e-55 218.0 172 66.9
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 5.5e-55 218.0 169 71.6
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 5.5e-55 218.0 169 71.6
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 7.2e-55 217.6 168 71.4
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.2e-54 216.9 168 68.5
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 1.2e-54 216.9 168 67.9
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 1.2e-54 216.9 172 68.0
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 1.2e-54 216.9 176 69.9
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 1.6e-54 216.5 168 70.2
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 69.2
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 1.6e-54 216.5 169 71.0
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.7e-54 215.7 170 71.2
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 4.6e-54 214.9 157 73.9
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 4.6e-54 214.9 170 67.6
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 7.9e-54 214.2 170 70.0
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 7.9e-54 214.2 170 70.0
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 7.9e-54 214.2 170 70.0
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 7.9e-54 214.2 168 67.9
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 1.0e-53 213.8 169 68.0
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 1.0e-53 213.8 168 67.3
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 1.0e-53 213.8 154 74.7
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 1.4e-53 213.4 172 67.4
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 1.8e-53 213.0 165 70.9
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 2.3e-53 212.6 169 69.8
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 2.3e-53 212.6 168 68.5
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 2.5e-52 209.1 170 66.5
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 7.4e-52 207.6 171 66.1
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 7.4e-52 207.6 171 66.1
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 7.4e-52 207.6 170 70.0
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 9.7e-52 207.2 171 66.1
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 1.3e-51 206.8 171 65.5
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 1.3e-51 206.8 171 66.1
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.7e-51 206.5 163 68.7
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 2.8e-51 205.7 165 65.5
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 8.2e-51 204.1 170 66.5
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.8e-50 203.0 169 67.5
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 4.1e-50 201.8 168 67.3
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 2.6e-49 199.1 162 67.3
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 2.6e-49 199.1 172 66.9
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 4.5e-49 198.4 171 64.9
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 8.5e-48 194.1 145 74.5
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 7.9e-46 187.6 102 86.3
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 9.7e-44 180.6 102 83.3
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 6.3e-43 177.9 100 83.0
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 5.3e-42 174.9 169 60.4
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 1.6e-41 173.3 100 82.0
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 5.9e-41 171.4 169 59.8
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 7.7e-41 171.0 170 60.0
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 1.7e-40 169.9 163 58.9
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 3.6e-38 162.2 121 73.6
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 3.7e-35 152.1 174 51.7
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 4.8e-35 151.8 217 47.5
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 6.3e-35 151.4 174 48.9
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 4.5e-33 145.2 175 50.3
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 3.8e-32 142.1 174 47.1
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 1.9e-31 139.8 175 46.3
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.6e-28 129.4 70 87.1
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 7.5e-28 127.9 70 85.7
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 1.3e-27 127.1 128 53.9
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 1.7e-27 126.7 140 50.0
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 3.1e-26 122.5 173 48.6
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 5.4e-26 121.7 169 47.3
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 9.1e-26 120.9 178 48.9
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 3.8e-24 115.5 115 50.4
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 5.2e-21 105.1 81 67.9
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.4e-20 102.1 67 74.6
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 8.6e-16 87.8 44 90.9
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 2.3e-08 63.2 70 61.4
TAR628G0544 Trochodendron aralioides HOM05D004247 ORTHO05D004994 6.2e-06 55.1 63 60.3


User provided reference genes

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