Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 1.0e-152 543.5 304 100.0
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 1.4e-141 506.5 304 94.4
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 7.5e-103 377.9 309 73.5
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 4.5e-100 368.6 309 72.5
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 9.2e-93 344.4 307 71.3
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 3.5e-84 315.8 245 73.9
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 3.9e-83 312.4 294 67.3
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 3.4e-71 272.7 313 57.5
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 1.6e-68 263.8 302 58.3
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 2.3e-67 260.0 240 65.0
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 9.0e-64 248.1 306 56.9
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 1.6e-60 237.3 274 58.8
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 3.5e-60 236.1 265 59.6
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 3.5e-60 236.1 259 64.9
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 1.3e-59 234.2 272 57.4
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 2.3e-59 233.4 275 58.9
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 3.0e-59 233.0 282 57.1
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 1.1e-58 231.1 247 55.5
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 3.3e-58 229.6 279 56.6
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 3.6e-57 226.1 284 55.6
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 4.8e-57 225.7 285 55.8
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 8.1e-57 224.9 317 54.3
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 8.1e-57 224.9 273 56.8
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 1.1e-56 224.6 306 57.2
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 1.8e-56 223.8 272 56.6
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 4.0e-56 222.6 243 62.1
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 6.9e-56 221.9 256 55.1
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 6.9e-56 221.9 284 50.7
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 6.9e-56 221.9 321 51.7
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.2e-54 216.9 272 55.5
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 3.8e-54 216.1 216 65.7
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 4.9e-54 215.7 243 60.9
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 4.9e-54 215.7 241 60.6
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 6.4e-54 215.3 286 57.0
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 8.4e-54 214.9 285 54.0
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 3.2e-53 213.0 279 52.3
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 7.1e-53 211.8 303 50.2
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 2.1e-52 210.3 285 52.6
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 7.9e-52 208.4 281 53.7
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 2.3e-51 206.8 295 54.9
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 3.9e-51 206.1 276 51.4
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 1.9e-50 203.8 272 53.7
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 2.5e-50 203.4 275 53.1
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 3.3e-50 203.0 272 51.5
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 1.3e-49 201.1 294 47.6
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 2.1e-49 200.3 123 79.7
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 2.8e-49 199.9 281 47.3
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 4.8e-49 199.1 275 47.3
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 1.4e-48 197.6 327 49.5
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 2.4e-48 196.8 286 49.7
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 2.4e-48 196.8 280 52.5
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 3.1e-48 196.4 286 51.0
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 3.1e-48 196.4 340 46.5
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 3.1e-48 196.4 320 48.4
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 1.2e-47 194.5 295 46.1
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 1.2e-47 194.5 271 49.1
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 1.5e-47 194.1 331 45.0
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 2.0e-47 193.7 121 79.3
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 2.0e-47 193.7 131 74.8
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 2.6e-47 193.4 265 54.0
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 5.8e-47 192.2 124 76.6
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 5.8e-47 192.2 124 76.6
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 5.8e-47 192.2 124 76.6
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 7.6e-47 191.8 203 64.5
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 2.9e-46 189.9 231 50.6
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 4.9e-46 189.1 276 49.6
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 4.9e-46 189.1 123 75.6
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 6.5e-46 188.7 121 81.8
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 9.3e-45 184.9 283 47.0
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 2.1e-44 183.7 121 78.5
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 4.6e-44 182.6 323 48.3
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 1.8e-43 180.6 288 47.9
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 3.9e-43 179.5 305 46.6
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 5.1e-43 179.1 290 42.8
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 6.7e-43 178.7 276 47.5
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 6.7e-43 178.7 291 46.7
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 2.5e-42 176.8 289 46.0
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 3.3e-42 176.4 128 75.8
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 5.7e-42 175.6 266 45.5
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 7.4e-42 175.3 189 61.9
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 7.4e-42 175.3 189 61.9
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 3.7e-41 172.9 266 49.6
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 8.2e-41 171.8 180 63.3
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.8e-40 170.6 268 47.8
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 1.8e-40 170.6 261 47.9
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 3.1e-40 169.9 106 81.1
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 5.3e-40 169.1 322 41.0
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 1.2e-39 167.9 312 48.1
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 2.6e-39 166.8 221 56.1
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 2.6e-39 166.8 271 46.1
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 2.6e-39 166.8 271 46.1
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 4.5e-39 166.0 119 73.1
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 5.8e-39 165.6 128 70.3
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 1.7e-38 164.1 135 68.1
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 1.1e-37 161.4 119 73.1
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 1.9e-37 160.6 128 70.3
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 2.7e-36 156.8 278 48.2
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 6.7e-35 152.1 116 69.0
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 1.1e-34 151.4 116 69.0
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 1.5e-34 151.0 190 50.0
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 1.9e-34 150.6 336 39.0
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 5.7e-34 149.1 116 68.1
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 8.2e-33 145.2 80 90.0
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 1.2e-28 131.3 80 81.2
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 2.1e-28 130.6 137 56.9
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 7.4e-26 122.1 306 40.8
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 1.7e-25 120.9 80 80.0
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 2.2e-22 110.5 62 90.3
CSS0019345 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 3.0e-19 100.1 201 45.8
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 6.7e-19 99.0 64 79.7
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 7.4e-18 95.5 127 41.7
Lj9P518T56 Lonicera japonica HOM05D006300 ORTHO05D007623 9.7e-18 95.1 151 50.3
Sc15g0000130 Simmondsia chinensis HOM05D006300 ORTHO05D007623 3.7e-17 93.2 135 54.1
Zm00001eb337890 Zea mays HOM05D006300 ORTHO05D007623 1.8e-16 90.9 125 40.8
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 5.3e-16 89.4 64 73.4
Cpa.g.sc25.56 Carica papaya HOM05D006300 ORTHO05D007623 2.0e-15 87.4 138 47.1
Sed0006903 Sechium edule HOM05D006300 ORTHO05D007623 4.2e-13 79.7 206 35.4
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 6.1e-12 75.9 97 47.4
MBI06_g20962_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 8.0e-12 75.5 40 90.0
MBI09_g03017_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 2.3e-11 73.9 39 89.7
Oeu007005.1 Olea europaea HOM05D006300 ORTHO05D007623 1.1e-10 71.6 43 81.4
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 1.4e-08 64.7 62 61.3
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 1.7e-06 57.8 27 100.0


User provided reference genes

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