Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.8e-274 947.6 611 100.0
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.3e-242 843.2 611 89.9
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 1.5e-203 713.4 479 82.0
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 8.7e-175 617.8 554 64.6
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 3.1e-172 609.4 534 65.9
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 3.9e-167 592.4 496 66.9
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 7.6e-147 525.0 432 71.1
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 6.5e-146 521.9 516 64.3
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 4.3e-142 509.2 513 60.4
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 2.5e-134 483.4 562 59.3
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.7e-133 480.7 401 70.8
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.8e-133 479.2 528 57.2
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 3.1e-124 449.9 357 63.6
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 2.7e-120 436.8 354 64.7
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 4.7e-120 436.0 367 60.5
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 4.7e-120 436.0 353 60.1
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 5.2e-119 432.6 365 62.2
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.5e-118 431.0 510 59.6
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 4.8e-117 426.0 437 51.9
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 1.0e-114 418.3 552 51.1
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 1.7e-114 417.5 379 55.1
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 2.2e-114 417.2 339 61.9
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 1.1e-113 414.8 344 64.8
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 3.0e-111 406.8 364 59.6
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 3.3e-110 403.3 358 55.9
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 5.7e-110 402.5 351 59.0
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 7.5e-110 402.1 356 61.2
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.3e-109 401.4 336 56.2
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 2.8e-109 400.2 346 58.1
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 2.8e-109 400.2 350 55.1
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 6.3e-109 399.1 332 56.6
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 1.4e-108 397.9 361 57.6
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 4.1e-108 396.4 336 55.4
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 5.3e-108 396.0 356 55.1
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.2e-107 394.8 336 55.1
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.2e-107 394.8 358 61.5
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.2e-107 394.8 364 54.9
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 3.5e-107 393.3 323 61.0
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 1.0e-106 391.7 358 55.3
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 1.3e-106 391.3 358 55.0
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 1.7e-106 391.0 372 52.4
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 1.7e-106 391.0 364 53.3
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 5.5e-105 386.0 362 56.9
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 6.1e-104 382.5 352 55.4
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 8.0e-104 382.1 366 60.4
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 1.4e-103 381.3 561 43.9
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.8e-103 380.9 309 59.2
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 5.2e-103 379.4 367 53.1
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 1.5e-102 377.9 366 60.4
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 2.0e-102 377.5 352 52.8
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 2.0e-102 377.5 350 54.6
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 4.4e-102 376.3 367 52.3
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 4.4e-102 376.3 370 52.2
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 4.4e-102 376.3 367 52.3
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 7.5e-102 375.6 368 51.4
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 7.5e-102 375.6 368 51.4
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 9.8e-102 375.2 351 58.1
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 1.3e-101 374.8 373 57.4
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 4.8e-101 372.9 547 46.4
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 6.3e-101 372.5 367 52.3
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 8.3e-101 372.1 374 57.2
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 1.1e-100 371.7 361 51.2
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 1.1e-100 371.7 366 51.1
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.4e-100 371.3 494 42.5
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 4.1e-100 369.8 459 44.9
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 4.1e-100 369.8 363 58.4
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 5.4e-100 369.4 364 53.3
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.2e-99 368.2 356 53.1
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 2.0e-99 367.5 364 53.0
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 2.0e-99 367.5 367 49.6
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 3.5e-99 366.7 298 56.7
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 7.7e-99 365.5 346 55.8
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 1.0e-98 365.2 373 57.1
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 1.3e-98 364.8 363 51.8
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 2.9e-98 363.6 348 54.3
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 3.8e-98 363.2 365 54.8
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 8.6e-98 362.1 296 57.4
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 8.6e-98 362.1 367 49.3
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 1.5e-97 361.3 362 50.8
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 1.5e-97 361.3 329 59.6
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 1.9e-97 360.9 308 56.5
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 2.5e-97 360.5 330 55.2
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 2.5e-97 360.5 513 42.7
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 4.2e-97 359.8 359 51.8
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 5.5e-97 359.4 368 50.3
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 1.6e-96 357.8 365 49.9
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 3.6e-96 356.7 346 58.4
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 1.8e-95 354.4 325 58.8
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 3.0e-95 353.6 374 54.5
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 5.2e-95 352.8 359 55.7
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 5.2e-95 352.8 355 57.2
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 5.2e-95 352.8 310 59.7
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 6.8e-95 352.4 339 52.8
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 8.9e-95 352.1 338 55.9
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 3.4e-94 350.1 335 59.7
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 1.3e-93 348.2 496 45.8
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 1.7e-93 347.8 364 54.1
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 2.2e-93 347.4 359 49.9
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 2.2e-93 347.4 359 49.6
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 3.7e-93 346.7 357 48.7
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 3.7e-93 346.7 345 51.3
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 8.3e-93 345.5 429 43.6
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 1.1e-92 345.1 352 49.1
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 1.1e-92 345.1 345 51.0
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 1.4e-92 344.7 345 51.0
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 3.2e-92 343.6 369 55.8
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 3.2e-92 343.6 343 51.0
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 5.4e-92 342.8 385 48.3
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 7.0e-92 342.4 345 50.7
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 7.0e-92 342.4 353 52.1
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 9.2e-92 342.0 311 60.1
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 4.5e-91 339.7 548 43.8
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.0e-90 338.6 354 56.8
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 2.3e-90 337.4 375 48.0
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.1e-89 335.1 350 53.7
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 9.5e-89 332.0 369 47.2
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 1.2e-88 331.6 341 54.5
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 1.2e-88 331.6 341 54.5
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 1.2e-88 331.6 252 64.7
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 1.6e-88 331.3 369 46.9
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 3.6e-88 330.1 350 52.9
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 3.6e-88 330.1 357 46.5
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 6.1e-88 329.3 350 54.3
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 8.0e-88 328.9 339 51.9
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 5.2e-87 326.2 419 43.4
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 8.9e-87 325.5 349 53.0
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.5e-86 324.7 353 53.0
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.5e-86 324.7 353 53.3
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.2e-85 320.9 353 52.7
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 9.2e-84 315.5 376 46.8
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 3.5e-83 313.5 266 56.4
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 2.3e-82 310.8 373 45.3
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 3.9e-82 310.1 347 53.0
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 3.9e-82 310.1 339 48.4
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 5.6e-81 306.2 288 50.3
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.6e-80 304.7 275 61.1
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 3.7e-77 293.5 365 43.8
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 6.4e-77 292.7 287 52.3
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.1e-68 265.4 275 59.3
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 3.0e-66 257.3 349 39.5
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.7e-61 241.5 322 45.3
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 2.2e-61 241.1 336 43.5
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 8.4e-61 239.2 322 45.3
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.9e-60 238.0 332 40.1
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.9e-60 238.0 322 42.9
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 2.5e-57 227.6 331 37.2
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 7.6e-54 216.1 320 45.0
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 9.9e-54 215.7 191 50.3
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 2.7e-51 207.6 290 39.0
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 7.8e-51 206.1 357 32.8
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 3.3e-49 200.7 231 45.5
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.0e-46 191.4 162 72.2
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 8.4e-45 186.0 135 65.9
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 4.2e-44 183.7 303 36.3
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 4.2e-44 183.7 303 36.3
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 9.3e-44 182.6 314 33.8
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 1.2e-43 182.2 363 31.1
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.2e-43 182.2 308 32.1
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 5.1e-42 176.8 292 32.9
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 5.3e-39 166.8 297 32.0
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.3e-37 162.2 157 48.4
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.1e-36 159.1 118 64.4
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.9e-36 158.3 203 40.9
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.6e-35 155.2 161 50.3
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 4.3e-33 147.1 114 63.2
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 1.5e-30 138.7 136 50.0
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.8e-26 125.2 251 33.1
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 5.7e-17 93.6 104 48.1
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 1.5e-14 85.5 81 48.1
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.7e-13 82.0 103 44.7
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.5e-12 78.2 62 54.8
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 3.9e-10 70.9 61 52.5
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 4.1e-07 60.8 58 44.8


User provided reference genes

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