Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007420g0030 Nicotiana tabacum HOM05D005359 ORTHO05D006431 3.8e-246 854.4 420 100.0
Nitab4.5_0002245g0060 Nicotiana tabacum HOM05D005359 ORTHO05D006431 6.3e-225 783.9 420 92.9
Peaxi162Scf00011g00352 Petunia axillaris HOM05D005359 ORTHO05D006431 3.7e-209 731.5 420 84.8
CAN.G1577.14 Capsicum annuum HOM05D005359 ORTHO05D006431 4.1e-192 674.9 421 79.8
PGSC0003DMG400023758 Solanum tuberosum HOM05D005359 ORTHO05D006431 8.5e-190 667.2 420 79.0
Sopen01g046670 Solanum pennellii HOM05D005359 ORTHO05D006431 1.2e-186 656.8 420 77.9
Dinv19364 Davidia involucrata HOM05D005359 ORTHO05D006431 7.8e-175 617.5 421 72.4
Dinv24279 Davidia involucrata HOM05D005359 ORTHO05D006431 5.0e-174 614.8 421 73.4
Lj5A252T45 Lonicera japonica HOM05D005359 ORTHO05D006431 1.9e-173 612.8 421 71.7
Ciclev10001293m.g Citrus clementina HOM05D005359 ORTHO05D006431 5.2e-171 604.7 421 72.0
MSTRG.5231 Avicennia marina HOM05D005359 ORTHO05D006431 1.3e-169 600.1 421 70.3
CSS0002632 Camellia sinensis var. sinensis HOM05D005359 ORTHO05D006431 4.9e-169 598.2 421 70.8
Cc02_g22460 Coffea canephora HOM05D005359 ORTHO05D006431 8.3e-169 597.4 421 70.5
RcHm_v2.0_Chr7g0222501 Rosa chinensis HOM05D005359 ORTHO05D006431 1.4e-168 596.7 421 70.1
CSS0043414 Camellia sinensis var. sinensis HOM05D005359 ORTHO05D006431 2.4e-168 595.9 421 70.5
Rhsim11G0129700 Rhododendron simsii HOM05D005359 ORTHO05D006431 4.1e-168 595.1 421 70.3
Eucgr.I02722 Eucalyptus grandis HOM05D005359 ORTHO05D006431 7.0e-168 594.3 421 69.1
Haze_01666 Corylus avellana HOM05D005359 ORTHO05D006431 1.6e-167 593.2 421 70.8
Oeu008891.1 Olea europaea HOM05D005359 ORTHO05D006431 2.0e-167 592.8 421 70.3
SalBow6G6401 Salvia bowleyana HOM05D005359 ORTHO05D006431 2.0e-167 592.8 421 69.6
Cfa005525 Carpinus fangiana HOM05D005359 ORTHO05D006431 6.0e-167 591.3 421 70.1
Prupe.1G568000 Prunus persica HOM05D005359 ORTHO05D006431 1.0e-166 590.5 421 70.3
FvH4_5g29550 Fragaria vesca HOM05D005359 ORTHO05D006431 3.0e-166 589.0 421 69.6
Manes.07G015400 Manihot esculenta HOM05D005359 ORTHO05D006431 6.6e-166 587.8 421 69.6
FAN18G3183 Fragaria x ananassa HOM05D005359 ORTHO05D006431 1.1e-165 587.0 421 69.4
MD15G1422700 Malus domestica HOM05D005359 ORTHO05D006431 2.5e-165 585.9 421 69.1
Thecc.02G038700 Theobroma cacao HOM05D005359 ORTHO05D006431 3.3e-165 585.5 421 70.1
FAN08G1144 Fragaria x ananassa HOM05D005359 ORTHO05D006431 4.3e-165 585.1 421 69.4
vmacro01763 Vaccinium macrocarpon HOM05D005359 ORTHO05D006431 1.2e-164 583.6 421 68.6
CiPaw.06G147600 Carya illinoinensis HOM05D005359 ORTHO05D006431 6.2e-164 581.3 421 68.2
FAN13G1157 Fragaria x ananassa HOM05D005359 ORTHO05D006431 1.1e-163 580.5 421 68.6
TWI14G1253 Tripterygium wilfordii HOM05D005359 ORTHO05D006431 1.1e-163 580.5 421 67.7
COL.COLO4_17869 Corchorus olitorius HOM05D005359 ORTHO05D006431 2.3e-163 579.3 421 68.9
Gohir.D01G169300 Gossypium hirsutum HOM05D005359 ORTHO05D006431 4.0e-163 578.6 421 69.1
Gorai.002G210900 Gossypium raimondii HOM05D005359 ORTHO05D006431 4.0e-163 578.6 421 69.1
Gohir.A01G178400 Gossypium hirsutum HOM05D005359 ORTHO05D006431 5.2e-163 578.2 421 69.1
QL08p043348 Quercus lobata HOM05D005359 ORTHO05D006431 2.0e-162 576.2 420 68.3
Duzib052G1228 Durio zibethinus HOM05D005359 ORTHO05D006431 2.6e-162 575.9 421 69.4
Glyma.15G046900 Glycine max HOM05D005359 ORTHO05D006431 3.4e-162 575.5 421 68.6
Sed0010360 Sechium edule HOM05D005359 ORTHO05D006431 4.4e-162 575.1 421 67.7
Lsat_1_v5_gn_5_109981 Lactuca sativa HOM05D005359 ORTHO05D006431 5.8e-162 574.7 422 67.5
PGR042G0198 Punica granatum HOM05D005359 ORTHO05D006431 5.8e-162 574.7 421 67.5
Sabra01G0162800 Salix brachista HOM05D005359 ORTHO05D006431 7.5e-162 574.3 421 68.2
ECA234G2063 Erigeron canadensis HOM05D005359 ORTHO05D006431 3.7e-161 572.0 421 65.3
DCAR_013987 Daucus carota HOM05D005359 ORTHO05D006431 8.3e-161 570.9 420 66.0
Hund05788 Selenicereus undatus HOM05D005359 ORTHO05D006431 8.3e-161 570.9 423 65.5
TWI23G0911 Tripterygium wilfordii HOM05D005359 ORTHO05D006431 8.3e-161 570.9 421 66.7
CANSAT11G0924 Cannabis sativa HOM05D005359 ORTHO05D006431 1.1e-160 570.5 421 67.5
Gorai.008G042100 Gossypium raimondii HOM05D005359 ORTHO05D006431 4.1e-160 568.5 421 68.2
Potri.001G210800 Populus trichocarpa HOM05D005359 ORTHO05D006431 7.1e-160 567.8 421 67.7
Glyma.08G185900 Glycine max HOM05D005359 ORTHO05D006431 9.2e-160 567.4 421 67.9
SGA_v2.0_scaffold292G47368 Striga asiatica HOM05D005359 ORTHO05D006431 9.2e-160 567.4 410 68.3
Lj6g0011599 Lotus japonicus HOM05D005359 ORTHO05D006431 1.2e-159 567.0 421 66.5
Potri.003G019400 Populus trichocarpa HOM05D005359 ORTHO05D006431 1.2e-159 567.0 421 66.7
TAR376G0200 Trochodendron aralioides HOM05D005359 ORTHO05D006431 1.2e-159 567.0 421 67.2
Sabra03G0010900 Salix brachista HOM05D005359 ORTHO05D006431 1.6e-159 566.6 421 67.2
TAR628G1654 Trochodendron aralioides HOM05D005359 ORTHO05D006431 2.1e-159 566.2 421 66.5
Psat2g122240 Pisum sativum HOM05D005359 ORTHO05D006431 2.7e-159 565.8 421 66.0
Cpa.g.sc113.63 Carica papaya HOM05D005359 ORTHO05D006431 4.6e-159 565.1 421 67.5
Gohir.A12G031900 Gossypium hirsutum HOM05D005359 ORTHO05D006431 7.8e-159 564.3 421 67.2
HanXRQChr16g0514561 Helianthus annuus HOM05D005359 ORTHO05D006431 7.8e-159 564.3 421 66.3
EL10Ac6g14556 Beta vulgaris HOM05D005359 ORTHO05D006431 1.0e-158 563.9 425 65.2
Solyc01g104230.4 Solanum lycopersicum HOM05D005359 ORTHO05D006431 1.0e-158 563.9 357 79.3
ClCG09G014240 Citrullus lanatus HOM05D005359 ORTHO05D006431 1.3e-158 563.5 421 66.0
Gohir.D12G040400 Gossypium hirsutum HOM05D005359 ORTHO05D006431 1.3e-158 563.5 421 67.5
Medtr2g007220 Medicago truncatula HOM05D005359 ORTHO05D006431 1.3e-158 563.5 421 65.8
Ca_00078_v3 Cicer arietinum L. HOM05D005359 ORTHO05D006431 5.1e-158 561.6 420 66.4
Nn5g28206 Nelumbo nucifera HOM05D005359 ORTHO05D006431 5.1e-158 561.6 421 67.0
Phvul.006G214300 Phaseolus vulgaris HOM05D005359 ORTHO05D006431 8.6e-158 560.8 422 66.8
Glyma.05G169600 Glycine max HOM05D005359 ORTHO05D006431 3.3e-157 558.9 422 66.8
AUR62002965 Chenopodium quinoa HOM05D005359 ORTHO05D006431 5.6e-157 558.1 425 64.2
Migut.N01041 Erythranthe guttata HOM05D005359 ORTHO05D006431 5.6e-157 558.1 421 64.8
HanXRQChr10g0289981 Helianthus annuus HOM05D005359 ORTHO05D006431 5.6e-157 558.1 421 64.4
unitig_26.g9020 Utricularia gibba HOM05D005359 ORTHO05D006431 7.3e-157 557.8 421 66.0
arahy.Tifrunner.gnm1.ann1.8TZ9EP Arachis hypogaea HOM05D005359 ORTHO05D006431 9.5e-157 557.4 421 66.5
AUR62007773 Chenopodium quinoa HOM05D005359 ORTHO05D006431 9.5e-157 557.4 425 64.0
CsaV3_6G037270 Cucumis sativus L. HOM05D005359 ORTHO05D006431 9.5e-157 557.4 421 64.8
arahy.Tifrunner.gnm1.ann1.HK0KDN Arachis hypogaea HOM05D005359 ORTHO05D006431 1.2e-156 557.0 421 66.5
MELO3C014388.2 Cucumis melo HOM05D005359 ORTHO05D006431 1.2e-156 557.0 418 64.8
Glyma.08G127900 Glycine max HOM05D005359 ORTHO05D006431 1.2e-156 557.0 422 66.6
Phvul.002G250300 Phaseolus vulgaris HOM05D005359 ORTHO05D006431 1.6e-156 556.6 422 65.9
CANSAT11G2649 Cannabis sativa HOM05D005359 ORTHO05D006431 3.6e-156 555.4 422 66.6
Lj4g0002358 Lotus japonicus HOM05D005359 ORTHO05D006431 1.8e-155 553.1 426 64.8
MD08G1228700 Malus domestica HOM05D005359 ORTHO05D006431 1.8e-155 553.1 404 67.8
VMungo0251G3193 Vigna mungo HOM05D005359 ORTHO05D006431 2.4e-155 552.7 421 65.6
VMungo0540G0616 Vigna mungo HOM05D005359 ORTHO05D006431 6.8e-155 551.2 421 64.8
HanXRQChr06g0169581 Helianthus annuus HOM05D005359 ORTHO05D006431 8.9e-155 550.8 421 64.1
TPR.G2126 Trifolium pratense HOM05D005359 ORTHO05D006431 1.5e-154 550.1 421 65.1
DCAR_031890 Daucus carota HOM05D005359 ORTHO05D006431 4.6e-151 538.5 408 63.7
Lalb_Chr20g0123431 Lupinus albus HOM05D005359 ORTHO05D006431 7.3e-149 531.2 421 62.9
THA.LOC104819321 Tarenaya hassleriana HOM05D005359 ORTHO05D006431 7.3e-149 531.2 422 63.7
CARHR011000 Cardamine hirsuta HOM05D005359 ORTHO05D006431 2.1e-148 529.6 421 63.2
Sc16g0001650 Simmondsia chinensis HOM05D005359 ORTHO05D006431 6.2e-148 528.1 424 63.2
THA.LOC104809588 Tarenaya hassleriana HOM05D005359 ORTHO05D006431 6.2e-148 528.1 421 63.4
Aqoxy5G02275 Aquilegia oxysepala HOM05D005359 ORTHO05D006431 1.8e-147 526.6 423 61.2
GSVIVG01022967001 Vitis vinifera HOM05D005359 ORTHO05D006431 2.4e-147 526.2 424 63.9
Thhalv10007703m.g Eutrema salsugineum HOM05D005359 ORTHO05D006431 2.2e-145 519.6 421 62.0
Aa31LG1G4050 Aethionema arabicum HOM05D005359 ORTHO05D006431 1.2e-143 513.8 420 61.4
CiPaw.05G044000 Carya illinoinensis HOM05D005359 ORTHO05D006431 1.6e-143 513.5 421 63.2
AL1G21710 Arabidopsis lyrata HOM05D005359 ORTHO05D006431 3.5e-143 512.3 421 62.2
AT1G10780 Arabidopsis thaliana HOM05D005359 ORTHO05D006431 3.5e-143 512.3 421 62.0
A09p64680 Brassica napus HOM05D005359 ORTHO05D006431 5.1e-142 508.4 421 61.8
Carub.0001s1033 Capsella rubella HOM05D005359 ORTHO05D006431 6.6e-142 508.1 421 61.3
BraA09t41824Z Brassica rapa HOM05D005359 ORTHO05D006431 8.7e-142 507.7 421 61.8
C08p48500 Brassica napus HOM05D005359 ORTHO05D006431 1.9e-141 506.5 421 61.5
BolC8t52390H Brassica oleracea HOM05D005359 ORTHO05D006431 1.9e-141 506.5 421 61.5
Sp1g09480 Schrenkiella parvula HOM05D005359 ORTHO05D006431 9.6e-141 504.2 421 60.6
MBI06_g20718_MAGBIO Magnolia biondii HOM05D005359 ORTHO05D006431 9.0e-139 497.7 421 57.2
ECA236G4790 Erigeron canadensis HOM05D005359 ORTHO05D006431 4.5e-138 495.4 379 63.3
Sed0018525 Sechium edule HOM05D005359 ORTHO05D006431 6.4e-137 491.5 422 58.3
ATR0193G009 Amborella trichopoda HOM05D005359 ORTHO05D006431 1.4e-136 490.3 420 58.3
Ah.03g138120 Amaranthus hybridus HOM05D005359 ORTHO05D006431 3.0e-134 482.6 427 56.0
Lalb_Chr07g0185731 Lupinus albus HOM05D005359 ORTHO05D006431 5.3e-131 471.9 426 55.6
Os09g0454300 Oryza sativa ssp. japonica HOM05D005359 ORTHO05D006431 5.8e-130 468.4 422 55.2
Zm00001eb100430 Zea mays HOM05D005359 ORTHO05D006431 2.2e-121 439.9 405 53.3
Zm00001eb176520 Zea mays HOM05D005359 ORTHO05D006431 6.7e-118 428.3 426 51.4
Zm00001eb037840 Zea mays HOM05D005359 ORTHO05D006431 3.7e-116 422.5 426 51.6
Hma1.2p1_0217F.1_g092010 Hydrangea macrophylla HOM05D005359 ORTHO05D006431 2.5e-109 399.8 251 77.3
Mapoly0113s0005 Marchantia polymorpha HOM05D005359 ORTHO05D006431 2.9e-105 386.3 403 47.6
Lsat_1_v5_gn_4_48740 Lactuca sativa HOM05D005359 ORTHO05D006431 8.5e-105 384.8 366 55.2
Os08g0469500 Oryza sativa ssp. japonica HOM05D005359 ORTHO05D006431 1.2e-103 380.9 423 47.8
Thecc.02G038500 Theobroma cacao HOM05D005359 ORTHO05D006431 2.0e-101 373.6 282 65.2
AagrBONN_evm.TU.Sc2ySwM_117.2184 Anthoceros agrestis HOM05D005359 ORTHO05D006431 5.0e-89 332.4 375 45.6
Oeu033126.1 Olea europaea HOM05D005359 ORTHO05D006431 3.6e-87 326.2 307 57.7
SMO169G0280 Selaginella moellendorffii HOM05D005359 ORTHO05D006431 3.6e-87 326.2 414 43.2
HPP92_010977 Vanilla planifolia HOM05D005359 ORTHO05D006431 2.4e-83 313.5 298 53.4
Nn1g08733 Nelumbo nucifera HOM05D005359 ORTHO05D006431 1.7e-76 290.8 249 58.2
CDE11G1073 Ceratophyllum demersum HOM05D005359 ORTHO05D006431 8.3e-68 261.9 316 43.7
arahy.Tifrunner.gnm1.ann1.3FYK03 Arachis hypogaea HOM05D005359 ORTHO05D006431 5.4e-59 232.6 266 50.4
Atru.chr6.646 Acer truncatum HOM05D005359 ORTHO05D006431 1.8e-54 217.6 133 76.7
BcaC05g24954 Brassica carinata HOM05D005359 ORTHO05D006431 1.4e-43 181.4 161 57.1
Dinv24276 Davidia involucrata HOM05D005359 ORTHO05D006431 4.1e-43 179.9 133 68.4
arahy.Tifrunner.gnm1.ann1.BYQ4G2 Arachis hypogaea HOM05D005359 ORTHO05D006431 1.3e-33 148.3 99 72.7
arahy.Tifrunner.gnm1.ann1.94J17Q Arachis hypogaea HOM05D005359 ORTHO05D006431 1.5e-29 134.8 91 72.5
arahy.Tifrunner.gnm1.ann1.B308TG Arachis hypogaea HOM05D005359 ORTHO05D006431 1.5e-24 118.2 68 77.9
arahy.Tifrunner.gnm1.ann1.E0G9L5 Arachis hypogaea HOM05D005359 ORTHO05D006431 1.6e-23 114.8 74 71.6
arahy.Tifrunner.gnm1.ann1.F717DE Arachis hypogaea HOM05D005359 ORTHO05D006431 4.8e-23 113.2 68 76.5
arahy.Tifrunner.gnm1.ann1.HDLM7U Arachis hypogaea HOM05D005359 ORTHO05D006431 6.9e-22 109.4 68 75.0
arahy.Tifrunner.gnm1.ann1.X0Q2J1 Arachis hypogaea HOM05D005359 ORTHO05D006431 6.9e-22 109.4 68 75.0
Oeu056678.1 Olea europaea HOM05D005359 ORTHO05D006431 6.4e-20 102.8 79 60.8
MSTRG.27843 Avicennia marina HOM05D005359 ORTHO05D006431 4.2e-19 100.1 103 52.4
Migut.E00521 Erythranthe guttata HOM05D005930 ORTHO05D003423 6.0e-10 69.7 237 25.3
MBI05_g43550_MAGBIO Magnolia biondii HOM05D003488 ORTHO05D004214 1.0e-09 68.9 297 23.6
MBI05_g08793_MAGBIO Magnolia biondii HOM05D003488 ORTHO05D004214 1.1e-08 65.5 297 23.2
Solyc07g064260.2 Solanum lycopersicum HOM05D000051 ORTHO05D000015 1.5e-08 65.1 247 27.1
THA.LOC104815726 Tarenaya hassleriana HOM05D003488 ORTHO05D004214 2.5e-08 64.3 309 22.7
Lsat_1_v5_gn_5_75660 Lactuca sativa HOM05D000051 ORTHO05D000015 5.6e-08 63.2 285 23.5
Nitab4.5_0000397g0270 Nicotiana tabacum HOM05D000051 ORTHO05D000015 7.4e-08 62.8 250 25.6
Ca_19405_v3 Cicer arietinum L. HOM05D003488 ORTHO05D004214 9.6e-08 62.4 363 22.3
Sopen07g032410 Solanum pennellii HOM05D000051 ORTHO05D000015 9.6e-08 62.4 247 26.7
C09p07200 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-07 61.2 280 25.4
Peaxi162Scf00179g00923 Petunia axillaris HOM05D000312 ORTHO05D000221 2.8e-07 60.8 268 22.0
Nitab4.5_0011608g0030 Nicotiana tabacum HOM05D000051 ORTHO05D000015 3.7e-07 60.5 250 24.8
CAN.G337.100 Capsicum annuum HOM05D000051 ORTHO05D000015 6.2e-07 59.7 423 22.0
PGSC0003DMG401001040 Solanum tuberosum HOM05D000051 ORTHO05D000015 1.1e-06 58.9 250 26.4
HPP92_017621 Vanilla planifolia HOM05D000576 ORTHO05D000368 1.4e-06 58.5 273 26.0
CiPaw.01G227900 Carya illinoinensis HOM05D001477 ORTHO05D001182 1.8e-06 58.2 203 26.1
SEGI_05690 Sequoiadendron giganteum HOM05D010869 ORTHO05D012699 2.4e-06 57.8 266 23.3
Haze_15913 Corylus avellana HOM05D001477 ORTHO05D001182 4.0e-06 57.0 211 26.1
SGA_v2.0_scaffold24G10274 Striga asiatica HOM05D000312 ORTHO05D000221 6.9e-06 56.2 207 25.1


User provided reference genes

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