Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007400g0140 Nicotiana tabacum HOM05D000533 ORTHO05D001069 7.7e-42 173.3 83 100.0
Nitab4.5_0006502g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.5e-37 158.3 87 87.4
Peaxi162Scf00133g00521 Petunia axillaris HOM05D000533 ORTHO05D001069 6.3e-36 153.7 87 83.9
Solyc00g500087.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.3e-36 153.7 87 83.9
Solyc00g500124.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.3e-36 153.7 87 83.9
Solyc00g500192.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.3e-36 153.7 87 83.9
Solyc00g500280.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.3e-36 153.7 87 83.9
Sopen04g017430 Solanum pennellii HOM05D000533 ORTHO05D001069 5.3e-35 150.6 87 81.6
Ah.10g027260 Amaranthus hybridus HOM05D000533 ORTHO05D001069 1.2e-34 149.4 87 80.5
Ah.10g027700 Amaranthus hybridus HOM05D000533 ORTHO05D001069 1.2e-34 149.4 87 80.5
PSO548G0122 Papaver somniferum HOM05D000533 ORTHO05D001069 2.0e-34 148.7 87 79.3
Medtr2g451380 Medicago truncatula HOM05D000533 ORTHO05D001069 2.6e-34 148.3 87 80.5
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 2.6e-34 148.3 87 80.5
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 2.6e-34 148.3 87 80.5
ATR0924G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 3.4e-34 147.9 87 80.5
Hma1.2p1_0660F.1_g197430 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 3.4e-34 147.9 87 80.5
Psat1g050080 Pisum sativum HOM05D000533 ORTHO05D001069 3.4e-34 147.9 87 80.5
TAR625G0265 Trochodendron aralioides HOM05D000533 ORTHO05D001069 3.4e-34 147.9 87 80.5
EL10Ac1g02290 Beta vulgaris HOM05D000533 ORTHO05D001069 4.5e-34 147.5 87 79.3
EL10Ac6g14289 Beta vulgaris HOM05D000533 ORTHO05D001069 4.5e-34 147.5 87 79.3
EL10Ac9g21011 Beta vulgaris HOM05D000533 ORTHO05D001069 4.5e-34 147.5 87 79.3
DCAR_032542 Daucus carota HOM05D000533 ORTHO05D001069 4.5e-34 147.5 87 80.5
PGR111G0062 Punica granatum HOM05D000533 ORTHO05D001069 5.9e-34 147.1 87 78.2
Ah.10g027020 Amaranthus hybridus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 78.2
Gohir.1Z049694 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 78.2
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
HanXRQChr00c0504g0575331 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
HanXRQChr17g0557731 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
LjContig00318g0022363 Lotus japonicus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
LjContig00319g0004717 Lotus japonicus HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
Psat0s1160g0320 Pisum sativum HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 79.3
QL93p0141_0008 Quercus lobata HOM05D000533 ORTHO05D001069 1.0e-33 146.4 87 80.5
ECA074G0013 Erigeron canadensis HOM05D000533 ORTHO05D001069 1.3e-33 146.0 87 79.3
Lsat_1_v5_gn_4_33860 Lactuca sativa HOM05D000533 ORTHO05D001069 1.3e-33 146.0 87 79.3
Lsat_1_v5_gn_5_124461 Lactuca sativa HOM05D000533 ORTHO05D001069 1.3e-33 146.0 87 79.3
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 1.3e-33 146.0 87 79.3
Lsat_1_v5_gn_8_137301 Lactuca sativa HOM05D000533 ORTHO05D001069 1.3e-33 146.0 87 79.3
Lsat_1_v5_gn_9_115440 Lactuca sativa HOM05D000533 ORTHO05D001069 1.3e-33 146.0 87 79.3
Nn029s41575 Nelumbo nucifera HOM05D000533 ORTHO05D001069 1.3e-33 146.0 87 79.3
Peaxi162Scf00030g02114 Petunia axillaris HOM05D000533 ORTHO05D001069 1.3e-33 146.0 84 83.3
Gorai.009G313900 Gossypium raimondii HOM05D000533 ORTHO05D001069 1.7e-33 145.6 87 77.0
Lj2C1238G31 Lonicera japonica HOM05D000533 ORTHO05D001069 1.7e-33 145.6 87 78.2
Lju5009C0T5 Lonicera japonica HOM05D000533 ORTHO05D001069 1.7e-33 145.6 87 78.2
Psat5g037760 Pisum sativum HOM05D000533 ORTHO05D001069 1.7e-33 145.6 87 79.3
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 2.2e-33 145.2 87 77.0
FAN01G2373 Fragaria x ananassa HOM05D000533 ORTHO05D001069 2.2e-33 145.2 87 77.0
Lalb_Chr07g0191821 Lupinus albus HOM05D000533 ORTHO05D001069 2.2e-33 145.2 87 78.2
Psat0s6989g0240 Pisum sativum HOM05D000533 ORTHO05D001069 2.2e-33 145.2 87 79.3
Lalb_Chr15g0080701 Lupinus albus HOM05D000533 ORTHO05D001069 2.9e-33 144.8 87 78.2
Solyc08g022170.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.9e-33 144.8 87 79.3
BolC9t56912H Brassica oleracea HOM05D000533 ORTHO05D001069 3.8e-33 144.4 87 78.2
Lsat_1_v5_gn_4_118061 Lactuca sativa HOM05D000533 ORTHO05D001069 3.8e-33 144.4 87 79.3
Hund28343 Selenicereus undatus HOM05D000533 ORTHO05D001069 6.5e-33 143.7 87 79.3
Hund29094 Selenicereus undatus HOM05D000533 ORTHO05D001069 6.5e-33 143.7 87 79.3
Hund30658 Selenicereus undatus HOM05D000533 ORTHO05D001069 6.5e-33 143.7 87 79.3
Hund30925 Selenicereus undatus HOM05D000533 ORTHO05D001069 6.5e-33 143.7 87 79.3
Sed0009234 Sechium edule HOM05D000533 ORTHO05D001069 1.1e-32 142.9 87 77.0
Sed0015694 Sechium edule HOM05D000533 ORTHO05D001069 1.1e-32 142.9 87 77.0
Sed0022513 Sechium edule HOM05D000533 ORTHO05D001069 1.1e-32 142.9 87 77.0
Gohir.1Z050466 Gossypium hirsutum HOM05D000533 ORTHO05D001069 3.2e-32 141.4 87 75.9
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 3.2e-32 141.4 87 75.9
Atru.chr2.908 Acer truncatum HOM05D000533 ORTHO05D001069 4.2e-32 141.0 87 77.0
ATCG01110 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 5.5e-32 140.6 87 75.9
C05p53840 Brassica napus HOM05D000533 ORTHO05D001069 5.5e-32 140.6 87 75.9
C07p33470 Brassica napus HOM05D000533 ORTHO05D001069 5.5e-32 140.6 87 75.9
C09p40300 Brassica napus HOM05D000533 ORTHO05D001069 5.5e-32 140.6 87 75.9
BolSC29t60510H Brassica oleracea HOM05D000533 ORTHO05D001069 5.5e-32 140.6 87 75.9
BolSC35t60688H Brassica oleracea HOM05D000533 ORTHO05D001069 5.5e-32 140.6 87 75.9
BolSC35t60708H Brassica oleracea HOM05D000533 ORTHO05D001069 5.5e-32 140.6 87 75.9
BolSC37t60797H Brassica oleracea HOM05D000533 ORTHO05D001069 5.5e-32 140.6 87 75.9
BraSC138t45531Z Brassica rapa HOM05D000533 ORTHO05D001069 5.5e-32 140.6 87 75.9
BraSC143t45656Z Brassica rapa HOM05D000533 ORTHO05D001069 5.5e-32 140.6 87 75.9
BraSC25t45914Z Brassica rapa HOM05D000533 ORTHO05D001069 5.5e-32 140.6 87 75.9
BraSC59t46554Z Brassica rapa HOM05D000533 ORTHO05D001069 5.5e-32 140.6 87 75.9
Lsat_1_v5_gn_6_87021 Lactuca sativa HOM05D000533 ORTHO05D001069 7.2e-32 140.2 87 77.0
Nitab4.5_0006409g0080 Nicotiana tabacum HOM05D000533 ORTHO05D001069 7.2e-32 140.2 87 75.9
BolC9t56921H Brassica oleracea HOM05D000533 ORTHO05D001069 9.4e-32 139.8 87 75.9
Gohir.A13G086335 Gossypium hirsutum HOM05D000533 ORTHO05D001069 2.1e-31 138.7 87 74.7
RcHm_v2.0_Chr3g0470811 Rosa chinensis HOM05D000533 ORTHO05D001069 2.1e-31 138.7 87 73.6
Phvul.004G015300 Phaseolus vulgaris HOM05D000533 ORTHO05D001069 2.7e-31 138.3 87 74.7
SEGI_05748 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 2.7e-31 138.3 87 73.6
SEGI_26516 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.7e-31 138.3 87 73.6
CAN.G965.3 Capsicum annuum HOM05D000533 ORTHO05D001069 7.9e-31 136.7 77 83.1
Gohir.A04G053078 Gossypium hirsutum HOM05D000533 ORTHO05D001069 7.9e-31 136.7 87 74.7
Atru.chr5.1326 Acer truncatum HOM05D000533 ORTHO05D001069 1.0e-30 136.3 87 74.7
MBI10_g47594_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 1.0e-30 136.3 83 75.9
BolC7t43858H Brassica oleracea HOM05D000533 ORTHO05D001069 1.8e-30 135.6 79 79.7
Oeu015129.1 Olea europaea HOM05D000533 ORTHO05D001069 1.8e-30 135.6 87 74.7
Glyma.18G155701 Glycine max HOM05D000533 ORTHO05D001069 2.3e-30 135.2 87 74.7
Eucgr.B00847 Eucalyptus grandis HOM05D000533 ORTHO05D001069 8.8e-30 133.3 77 79.2
CAN.G378.10 Capsicum annuum HOM05D000533 ORTHO05D001069 3.3e-29 131.3 77 77.9
SEGI_26586 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 3.3e-29 131.3 87 71.3
Potri.013G074650 Populus trichocarpa HOM05D000533 ORTHO05D001069 4.4e-29 131.0 77 79.2
CAN.G1045.9 Capsicum annuum HOM05D000533 ORTHO05D001069 9.7e-29 129.8 73 82.2
CAN.G1470.8 Capsicum annuum HOM05D000533 ORTHO05D001069 9.7e-29 129.8 73 82.2
Lsat_1_v5_gn_5_66001 Lactuca sativa HOM05D000533 ORTHO05D001069 1.7e-28 129.0 82 75.6
unitig_91.g26523 Utricularia gibba HOM05D000533 ORTHO05D001069 3.7e-28 127.9 73 80.8
DCAR_005908 Daucus carota HOM05D000533 ORTHO05D001069 4.8e-28 127.5 73 80.8
FvH4_6g41620 Fragaria vesca HOM05D000533 ORTHO05D001069 4.8e-28 127.5 73 79.5
ClCG11G009630 Citrullus lanatus HOM05D000533 ORTHO05D001069 8.2e-28 126.7 73 79.5
MELO3C027054.2 Cucumis melo HOM05D000533 ORTHO05D001069 8.2e-28 126.7 73 79.5
arahy.Tifrunner.gnm1.ann1.EMA6B0 Arachis hypogaea HOM05D000533 ORTHO05D001069 5.9e-26 120.6 87 66.7
ClCG07G012690 Citrullus lanatus HOM05D000533 ORTHO05D001069 5.9e-26 120.6 72 77.8
Gorai.013G076700 Gossypium raimondii HOM05D000533 ORTHO05D001069 7.7e-26 120.2 76 73.7
Psat0s1920g0160 Pisum sativum HOM05D000533 ORTHO05D001069 7.7e-26 120.2 73 75.3
Medtr4g117480 Medicago truncatula HOM05D000533 ORTHO05D001069 2.5e-24 115.2 70 75.7
ClCG10G006000 Citrullus lanatus HOM05D000533 ORTHO05D001069 5.5e-24 114.0 87 65.5
Sed0014804 Sechium edule HOM05D000533 ORTHO05D001069 9.4e-24 113.2 82 65.9
vmacro22393 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 1.2e-23 112.8 66 81.8
vmacro22419 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 1.2e-23 112.8 66 81.8
SMO086G0065 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 2.1e-23 112.1 86 61.6
BolC5t34051H Brassica oleracea HOM05D000533 ORTHO05D001069 4.8e-20 100.9 69 71.0
Lalb_Chr25g0284051 Lupinus albus HOM05D000533 ORTHO05D001069 8.2e-20 100.1 60 78.3
Gohir.D08G207450 Gossypium hirsutum HOM05D000533 ORTHO05D001069 4.5e-18 94.4 67 67.2
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 5.9e-18 94.0 73 64.4
Gohir.A01G140323 Gossypium hirsutum HOM05D000533 ORTHO05D001069 7.7e-18 93.6 82 57.3
Gohir.D11G334151 Gossypium hirsutum HOM05D000533 ORTHO05D001069 7.7e-18 93.6 82 57.3
arahy.Tifrunner.gnm1.ann1.JUM97N Arachis hypogaea HOM05D000533 ORTHO05D001069 2.2e-17 92.0 82 52.4
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 2.9e-17 91.7 82 57.3
SabraPtG0005900 Salix brachista HOM05D000533 ORTHO05D001069 2.9e-17 91.7 82 57.3
CSS0030738 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D001069 5.5e-16 87.4 82 57.3
Lalb_Chr18g0049401 Lupinus albus HOM05D000533 ORTHO05D001069 5.5e-16 87.4 64 68.8
TPR.G20526 Trifolium pratense HOM05D000533 ORTHO05D001069 6.1e-15 84.0 76 59.2
Psat7g199400 Pisum sativum HOM05D000533 ORTHO05D001069 1.0e-14 83.2 45 82.2
Mapoly0048s0044 Marchantia polymorpha HOM05D000533 ORTHO05D001069 3.0e-14 81.6 50 72.0
Eucgr.F01268 Eucalyptus grandis HOM05D000533 ORTHO05D001069 5.2e-14 80.9 63 69.8
Psat0s2709g0120 Pisum sativum HOM05D000533 ORTHO05D001069 5.2e-14 80.9 45 82.2
SMO086G0066 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 5.2e-14 80.9 59 64.4
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 8.8e-14 80.1 48 79.2
SalBow1G1175 Salvia bowleyana HOM05D000533 ORTHO05D001069 7.5e-13 77.0 68 57.4
Nitab4.5_0000729g0120 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.8e-13 76.6 66 60.6
AL9U11960 Arabidopsis lyrata HOM05D000533 ORTHO05D001069 1.3e-12 76.3 44 77.3
Gorai.004G123700 Gossypium raimondii HOM05D000533 ORTHO05D001069 1.3e-12 76.3 75 56.0
SEGI_36880 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 3.7e-12 74.7 44 75.0
HanXRQChr11g0321231 Helianthus annuus HOM05D000533 ORTHO05D001069 4.8e-12 74.3 72 55.6
Psat7g126800 Pisum sativum HOM05D000533 ORTHO05D001069 6.3e-12 73.9 37 86.5
Gohir.D09G085250 Gossypium hirsutum HOM05D000533 ORTHO05D001069 5.4e-11 70.9 56 58.9
Hund17906 Selenicereus undatus HOM05D000533 ORTHO05D001069 1.2e-10 69.7 57 56.1
CAN.G127.10 Capsicum annuum HOM05D000533 ORTHO05D001069 2.0e-10 68.9 49 65.3
Gorai.006G101200 Gossypium raimondii HOM05D000533 ORTHO05D001069 7.7e-10 67.0 56 58.9
TPR.G30414 Trifolium pratense HOM05D000533 ORTHO05D001069 1.0e-09 66.6 37 78.4
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 1.3e-09 66.2 69 43.5
TPR.G9361 Trifolium pratense HOM05D000533 ORTHO05D001069 1.3e-09 66.2 80 43.8
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 1.7e-09 65.9 67 46.3
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 3.8e-09 64.7 67 41.8
Aa31LG5G21740 Aethionema arabicum HOM05D000533 ORTHO05D001069 1.5e-08 62.8 54 64.8
Solyc01g017740.2 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.5e-08 62.8 40 72.5
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 4.2e-08 61.2 67 41.8
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 7.2e-08 60.5 67 43.3
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 7.2e-08 60.5 82 41.5
Nitab4.5_0000843g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 7.2e-08 60.5 40 65.0
AUR62043262 Chenopodium quinoa HOM05D000533 ORTHO05D001069 9.4e-08 60.1 31 80.6
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 1.2e-07 59.7 67 40.3
Solyc02g011810.3 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.6e-07 59.3 32 81.2
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 2.7e-07 58.5 66 43.9
Hma1.2p1_0386F.1_g141700 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 3.6e-07 58.2 66 43.9
Aqoxy84s002 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.8e-06 55.8 68 36.8
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 1.8e-06 55.8 66 42.4
EL10Ac7g16243 Beta vulgaris HOM05D000533 ORTHO05D001069 1.8e-06 55.8 73 43.8
Nn1g10104 Nelumbo nucifera HOM05D000533 ORTHO05D001069 2.3e-06 55.5 66 42.4
Eucgr.I00925 Eucalyptus grandis HOM05D000533 ORTHO05D001069 4.0e-06 54.7 40 67.5


User provided reference genes

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