Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007217g0040 Nicotiana tabacum HOM05D000159 ORTHO05D000148 2.7e-253 878.2 467 100.0
Nitab4.5_0000861g0050 Nicotiana tabacum HOM05D000159 ORTHO05D000148 6.9e-148 528.1 437 69.6
Nitab4.5_0003900g0020 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.8e-143 513.5 438 68.7
PGSC0003DMG400034310 Solanum tuberosum HOM05D000159 ORTHO05D000148 1.1e-116 424.5 446 60.1
Peaxi162Scf00128g01331 Petunia axillaris HOM05D000159 ORTHO05D000148 7.0e-116 421.8 453 57.6
Sopen05g010900 Solanum pennellii HOM05D000159 ORTHO05D000148 2.2e-114 416.8 441 59.4
Solyc05g015510.3 Solanum lycopersicum HOM05D000159 ORTHO05D000148 1.1e-113 414.5 441 59.0
CAN.G163.8 Capsicum annuum HOM05D000159 ORTHO05D000148 3.3e-110 402.9 445 57.1
Nitab4.5_0002558g0020 Nicotiana tabacum HOM05D000159 ORTHO05D000148 3.7e-69 266.5 441 44.9
Nitab4.5_0000067g0130 Nicotiana tabacum HOM05D000159 ORTHO05D000148 5.4e-68 262.7 450 44.7
Dinv10948 Davidia involucrata HOM05D000159 ORTHO05D000148 1.1e-60 238.4 453 41.7
Nitab4.5_0001315g0110 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.9e-60 237.7 305 54.1
CSS0049510 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 2.5e-57 227.3 449 40.1
Oeu006523.1 Olea europaea HOM05D000159 ORTHO05D000148 1.6e-51 208.0 434 38.2
vmacro01056 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 2.1e-51 207.6 449 37.2
Rhsim12G0025200 Rhododendron simsii HOM05D000159 ORTHO05D000148 3.5e-51 206.8 427 39.3
Cc11_g16990 Coffea canephora HOM05D000159 ORTHO05D000148 7.8e-51 205.7 412 39.8
Dinv24868 Davidia involucrata HOM05D000159 ORTHO05D000148 2.3e-50 204.1 430 38.6
Actinidia08065 Actinidia chinensis HOM05D000159 ORTHO05D000148 4.8e-48 196.4 401 39.4
Nn5g26966 Nelumbo nucifera HOM05D000159 ORTHO05D000148 6.2e-48 196.1 448 35.7
Hma1.2p1_0275F.1_g110710 Hydrangea macrophylla HOM05D000159 ORTHO05D000148 1.1e-47 195.3 398 39.7
TAR383G0303 Trochodendron aralioides HOM05D000159 ORTHO05D000148 5.3e-47 193.0 424 37.0
MSTRG.499 Avicennia marina HOM05D000159 ORTHO05D000148 4.4e-46 189.9 452 35.2
Migut.K00951 Erythranthe guttata HOM05D000159 ORTHO05D000148 1.3e-45 188.3 426 35.9
Nn8g41238 Nelumbo nucifera HOM05D000159 ORTHO05D000148 7.1e-44 182.6 447 34.2
MBI16_g00826_MAGBIO Magnolia biondii HOM05D000159 ORTHO05D000148 7.9e-43 179.1 390 36.7
MSTRG.8010 Avicennia marina HOM05D000159 ORTHO05D000148 3.0e-42 177.2 419 34.6
SalBow8G4825 Salvia bowleyana HOM05D000159 ORTHO05D000148 1.9e-41 174.5 421 36.8
Potri.003G172600 Populus trichocarpa HOM05D000159 ORTHO05D000148 1.4e-39 168.3 485 33.6
Oeu003329.2 Olea europaea HOM05D000159 ORTHO05D000148 1.2e-38 165.2 448 34.6
Atru.chr11.2335 Acer truncatum HOM05D000159 ORTHO05D000148 4.5e-38 163.3 435 34.9
Manes.12G010200 Manihot esculenta HOM05D000159 ORTHO05D000148 4.9e-37 159.8 467 32.5
SalBow1G0450 Salvia bowleyana HOM05D000159 ORTHO05D000148 1.4e-36 158.3 421 34.0
SalBow2G2739 Salvia bowleyana HOM05D000159 ORTHO05D000148 1.4e-36 158.3 421 34.0
Hma1.2p1_0065F.1_g035375 Hydrangea macrophylla HOM05D000159 ORTHO05D000148 4.2e-36 156.8 366 37.7
Sabra03G0126300 Salix brachista HOM05D000159 ORTHO05D000148 1.6e-35 154.8 462 32.9
Potri.001G055900 Populus trichocarpa HOM05D000159 ORTHO05D000148 6.0e-35 152.9 449 31.6
Aqoxy7G02608 Aquilegia oxysepala HOM05D000159 ORTHO05D000148 1.8e-34 151.4 427 34.2
Ciclev10031391m.g Citrus clementina HOM05D000159 ORTHO05D000148 2.3e-34 151.0 428 35.3
DCAR_026458 Daucus carota HOM05D000159 ORTHO05D000148 6.7e-34 149.4 412 33.7
Thecc.02G206500 Theobroma cacao HOM05D000159 ORTHO05D000148 1.5e-33 148.3 438 33.6
MBI16_g00825_MAGBIO Magnolia biondii HOM05D000159 ORTHO05D000148 1.9e-33 147.9 339 36.6
TWI36G0394 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 2.5e-33 147.5 444 32.7
Manes.13G011000 Manihot esculenta HOM05D000159 ORTHO05D000148 1.3e-32 145.2 434 33.4
Dinv12626 Davidia involucrata HOM05D000159 ORTHO05D000148 1.6e-32 144.8 421 34.4
PGSC0003DMG400026736 Solanum tuberosum HOM05D000159 ORTHO05D000148 3.7e-32 143.7 413 34.6
TWI18G0107 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 1.1e-31 142.1 455 31.0
COL.COLO4_20413 Corchorus olitorius HOM05D000159 ORTHO05D000148 1.8e-31 141.4 428 32.9
Migut.E00014 Erythranthe guttata HOM05D000159 ORTHO05D000148 6.9e-31 139.4 199 48.7
RcHm_v2.0_Chr4g0430121 Rosa chinensis HOM05D000159 ORTHO05D000148 6.9e-31 139.4 427 32.8
CSS0037796 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 9.0e-31 139.0 192 54.2
CSS0045799 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 1.2e-30 138.7 192 54.2
QL03p052489 Quercus lobata HOM05D000159 ORTHO05D000148 1.5e-30 138.3 425 33.4
GSVIVG01010496001 Vitis vinifera HOM05D000159 ORTHO05D000148 2.0e-30 137.9 413 32.2
HanXRQChr17g0569001 Helianthus annuus HOM05D000159 ORTHO05D000148 2.6e-30 137.5 427 34.4
Gohir.A01G154600 Gossypium hirsutum HOM05D000159 ORTHO05D000148 5.8e-30 136.3 435 30.8
Haze_12428 Corylus avellana HOM05D000159 ORTHO05D000148 7.6e-30 136.0 426 34.5
Sabra01G0040300 Salix brachista HOM05D000159 ORTHO05D000148 8.4e-29 132.5 437 30.7
TWI75G1778 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 8.4e-29 132.5 417 32.9
Cfa012885 Carpinus fangiana HOM05D000159 ORTHO05D000148 1.4e-28 131.7 407 32.9
Gohir.A03G125600 Gossypium hirsutum HOM05D000159 ORTHO05D000148 3.2e-28 130.6 426 31.0
Prupe.1G224900 Prunus persica HOM05D000159 ORTHO05D000148 3.2e-28 130.6 425 32.7
EL10Ac6g13514 Beta vulgaris HOM05D000159 ORTHO05D000148 5.5e-28 129.8 426 31.7
Lj3C1069T17 Lonicera japonica HOM05D000159 ORTHO05D000148 7.1e-28 129.4 393 35.9
Gorai.005G166500 Gossypium raimondii HOM05D000159 ORTHO05D000148 1.2e-27 128.6 428 30.8
Haze_21250 Corylus avellana HOM05D000159 ORTHO05D000148 1.6e-27 128.3 193 48.7
Duzib248G1677 Durio zibethinus HOM05D000159 ORTHO05D000148 1.6e-27 128.3 425 32.5
ECA233G4062 Erigeron canadensis HOM05D000159 ORTHO05D000148 1.6e-27 128.3 370 33.5
AUR62028919 Chenopodium quinoa HOM05D000159 ORTHO05D000148 2.1e-27 127.9 439 32.1
Duzib268G0026 Durio zibethinus HOM05D000159 ORTHO05D000148 1.0e-26 125.6 438 30.4
FAN17G2684 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.8e-26 124.8 426 30.8
Oeu004449.3 Olea europaea HOM05D000159 ORTHO05D000148 1.8e-26 124.8 445 28.3
SGA_v2.0_scaffold391G50627 Striga asiatica HOM05D000159 ORTHO05D000148 2.3e-26 124.4 191 44.5
FvH4_4g23650 Fragaria vesca HOM05D000159 ORTHO05D000148 3.0e-26 124.0 427 31.4
FAN12G2716 Fragaria x ananassa HOM05D000159 ORTHO05D000148 3.0e-26 124.0 427 31.4
AUR62005629 Chenopodium quinoa HOM05D000159 ORTHO05D000148 3.9e-26 123.6 432 31.5
ECA246G0044 Erigeron canadensis HOM05D000159 ORTHO05D000148 6.7e-26 122.9 437 30.9
CANSAT01G1239 Cannabis sativa HOM05D000159 ORTHO05D000148 8.7e-26 122.5 423 33.3
Lsat_1_v5_gn_4_421 Lactuca sativa HOM05D000159 ORTHO05D000148 8.7e-26 122.5 402 34.1
Gohir.D02G148400 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.5e-25 121.7 429 30.3
FAN07G1077 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.9e-25 121.3 427 31.1
CiPaw.06G103300 Carya illinoinensis HOM05D000159 ORTHO05D000148 4.3e-25 120.2 425 32.7
Cpa.g.sc43.66 Carica papaya HOM05D000159 ORTHO05D000148 7.4e-25 119.4 195 43.1
Eucgr.B03500 Eucalyptus grandis HOM05D000159 ORTHO05D000148 9.6e-25 119.0 200 45.0
PGR102G2419 Punica granatum HOM05D000159 ORTHO05D000148 1.3e-24 118.6 203 44.8
QL11p007033 Quercus lobata HOM05D000159 ORTHO05D000148 1.3e-24 118.6 415 31.1
Lj6A827T49 Lonicera japonica HOM05D000159 ORTHO05D000148 4.8e-24 116.7 193 44.0
Gorai.002G182700 Gossypium raimondii HOM05D000159 ORTHO05D000148 6.3e-24 116.3 435 28.5
Dinv32055 Davidia involucrata HOM05D000159 ORTHO05D000148 1.4e-23 115.2 416 31.7
Sopen04g017460 Solanum pennellii HOM05D000159 ORTHO05D000148 1.8e-23 114.8 345 33.3
FAN22G1786 Fragaria x ananassa HOM05D000159 ORTHO05D000148 3.1e-23 114.0 427 30.0
Ah.02g130860 Amaranthus hybridus HOM05D000159 ORTHO05D000148 4.1e-23 113.6 363 32.2
Actinidia02545 Actinidia chinensis HOM05D000159 ORTHO05D000148 6.9e-23 112.8 373 32.7
PSO063G4570 Papaver somniferum HOM05D000159 ORTHO05D000148 9.0e-23 112.5 436 31.9
MD16G1120300 Malus domestica HOM05D000159 ORTHO05D000148 2.0e-22 111.3 423 30.5
Hma1.2p1_0394F.1_g143140 Hydrangea macrophylla HOM05D000159 ORTHO05D000148 5.9e-22 109.8 410 31.2
Gohir.D04G183500 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.7e-21 108.2 432 31.7
Lsat_1_v5_gn_3_31000 Lactuca sativa HOM05D000159 ORTHO05D000148 2.2e-21 107.8 375 32.5
CiPaw.05G108800 Carya illinoinensis HOM05D000159 ORTHO05D000148 3.8e-21 107.1 414 31.6
Potri.018G149900 Populus trichocarpa HOM05D000159 ORTHO05D000148 5.0e-21 106.7 486 28.8
Hund06094 Selenicereus undatus HOM05D000159 ORTHO05D000148 8.4e-21 105.9 199 42.7
Ah.03g136100 Amaranthus hybridus HOM05D000159 ORTHO05D000148 1.1e-20 105.5 192 42.7
Gorai.012G176500 Gossypium raimondii HOM05D000159 ORTHO05D000148 1.1e-20 105.5 432 31.2
Sc04g0010200 Simmondsia chinensis HOM05D000159 ORTHO05D000148 1.4e-20 105.1 197 45.7
Gohir.A04G140300 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.9e-20 104.8 436 30.7
PSO170G4438 Papaver somniferum HOM05D000159 ORTHO05D000148 3.2e-20 104.0 200 40.5
MD13G1120300 Malus domestica HOM05D000159 ORTHO05D000148 4.2e-20 103.6 194 44.3
A09p20240 Brassica napus HOM05D000159 ORTHO05D000148 9.3e-20 102.4 188 43.6
BraA09t37637Z Brassica rapa HOM05D000159 ORTHO05D000148 9.3e-20 102.4 188 43.6
SGA_v2.0_scaffold9G04783 Striga asiatica HOM05D000159 ORTHO05D000148 9.3e-20 102.4 446 29.4
arahy.Tifrunner.gnm1.ann1.H3CMIK Arachis hypogaea HOM05D000159 ORTHO05D000148 1.2e-19 102.1 195 43.6
arahy.Tifrunner.gnm1.ann1.DP1F98 Arachis hypogaea HOM05D000159 ORTHO05D000148 2.1e-19 101.3 195 43.6
Aa31LG9G13350 Aethionema arabicum HOM05D000159 ORTHO05D000148 1.8e-18 98.2 193 38.3
Thhalv10003215m.g Eutrema salsugineum HOM05D000159 ORTHO05D000148 6.7e-18 96.3 190 42.6
C09p25660 Brassica napus HOM05D000159 ORTHO05D000148 1.1e-17 95.5 382 31.9
BolC9t55469H Brassica oleracea HOM05D000159 ORTHO05D000148 1.1e-17 95.5 382 31.9
Dinv26495 Davidia involucrata HOM05D000001 ORTHO05D010280 1.1e-17 95.5 415 28.0
Phvul.001G262600 Phaseolus vulgaris HOM05D000159 ORTHO05D000148 1.1e-17 95.5 189 41.3
ECA234G1285 Erigeron canadensis HOM05D000159 ORTHO05D000148 1.9e-17 94.7 447 29.8
Hund25469 Selenicereus undatus HOM05D000159 ORTHO05D000148 4.3e-17 93.6 185 38.4
BcaB07g31020 Brassica carinata HOM05D000159 ORTHO05D000148 7.4e-17 92.8 383 30.5
BcaC04g21938 Brassica carinata HOM05D000159 ORTHO05D000148 9.7e-17 92.4 382 31.7
CARHR180600 Cardamine hirsuta HOM05D000159 ORTHO05D000148 1.3e-16 92.0 193 39.4
Os02g0139400 Oryza sativa ssp. japonica HOM05D000159 ORTHO05D000148 1.3e-16 92.0 194 40.7
VMungo1383G2938 Vigna mungo HOM05D000159 ORTHO05D000148 1.3e-16 92.0 191 42.4
Ca_18023_v3 Cicer arietinum L. HOM05D000159 ORTHO05D000148 3.7e-16 90.5 194 38.7
Actinidia30641 Actinidia chinensis HOM05D000159 ORTHO05D000148 6.3e-16 89.7 148 39.9
A06p47930 Brassica napus HOM05D000159 ORTHO05D000148 8.2e-16 89.4 199 37.2
BraA06t27663Z Brassica rapa HOM05D000159 ORTHO05D000148 8.2e-16 89.4 199 37.2
Lalb_Chr12g0206081 Lupinus albus HOM05D000159 ORTHO05D000148 8.2e-16 89.4 190 40.5
Medtr3g085180 Medicago truncatula HOM05D000159 ORTHO05D000148 8.2e-16 89.4 185 39.5
Lalb_Chr13g0294381 Lupinus albus HOM05D000159 ORTHO05D000148 1.1e-15 89.0 189 40.7
Gohir.D01G146800 Gossypium hirsutum HOM05D000159 ORTHO05D000148 2.4e-15 87.8 201 33.8
THA.LOC104820526 Tarenaya hassleriana HOM05D000159 ORTHO05D000148 3.1e-15 87.4 190 39.5
HanXRQChr17g0540211 Helianthus annuus HOM05D000159 ORTHO05D000148 4.1e-15 87.0 406 28.8
C07p25880 Brassica napus HOM05D000159 ORTHO05D000148 5.3e-15 86.7 194 39.7
unitig_699.g19959 Utricularia gibba HOM05D000159 ORTHO05D000148 9.0e-15 85.9 184 36.4
THA.LOC104812596 Tarenaya hassleriana HOM05D000159 ORTHO05D000148 1.2e-14 85.5 184 39.1
Lalb_Chr11g0075791 Lupinus albus HOM05D000159 ORTHO05D000148 1.5e-14 85.1 191 38.7
Sabra18G0126600 Salix brachista HOM05D000159 ORTHO05D000148 2.0e-14 84.7 190 37.9
BcaC06g31711 Brassica carinata HOM05D000159 ORTHO05D000148 3.4e-14 84.0 394 31.0
Carub.0008s0542 Capsella rubella HOM05D000159 ORTHO05D000148 5.9e-14 83.2 396 29.0
TPR.G17775 Trifolium pratense HOM05D000159 ORTHO05D000148 7.7e-14 82.8 374 29.9
vmacro20741 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 7.7e-14 82.8 360 29.2
BcaC06g34666 Brassica carinata HOM05D000159 ORTHO05D000148 1.7e-13 81.6 194 39.2
BolC7t43108H Brassica oleracea HOM05D000159 ORTHO05D000148 1.7e-13 81.6 194 39.2
Rhsim01G0105700 Rhododendron simsii HOM05D000159 ORTHO05D000148 1.7e-13 81.6 392 28.1
TPR.G17095 Trifolium pratense HOM05D000159 ORTHO05D000148 2.9e-13 80.9 189 36.5
AT5G43270 Arabidopsis thaliana HOM05D000159 ORTHO05D000148 5.0e-13 80.1 189 40.2
Lsat_1_v5_gn_8_70141 Lactuca sativa HOM05D000159 ORTHO05D000148 1.1e-12 79.0 195 33.3
arahy.Tifrunner.gnm1.ann1.I2W0HI Arachis hypogaea HOM05D000159 ORTHO05D000148 2.5e-12 77.8 195 35.4
Lalb_Chr07g0187101 Lupinus albus HOM05D000159 ORTHO05D000148 3.2e-12 77.4 397 28.5
TAR626G0586 Trochodendron aralioides HOM05D000159 ORTHO05D000148 5.5e-12 76.6 145 36.6
Ca_16452_v3 Cicer arietinum L. HOM05D000159 ORTHO05D000148 7.2e-12 76.3 192 35.9
Glyma.11G251500 Glycine max HOM05D000159 ORTHO05D000148 7.2e-12 76.3 394 30.5
HanXRQChr06g0174671 Helianthus annuus HOM05D000159 ORTHO05D000148 9.4e-12 75.9 349 27.8
THA.LOC104825499 Tarenaya hassleriana HOM05D000159 ORTHO05D000148 9.4e-12 75.9 185 36.8
Glyma.18G005600 Glycine max HOM05D000159 ORTHO05D000148 2.1e-11 74.7 191 36.6
Lj6g0010992 Lotus japonicus HOM05D000159 ORTHO05D000148 2.1e-11 74.7 399 29.3
Sabra06G0060500 Salix brachista HOM05D000159 ORTHO05D000148 2.1e-11 74.7 430 27.7
AL8G17210 Arabidopsis lyrata HOM05D000159 ORTHO05D000148 3.6e-11 73.9 388 28.9
Lj4g0012721 Lotus japonicus HOM05D000159 ORTHO05D000148 3.6e-11 73.9 391 26.9
arahy.Tifrunner.gnm1.ann1.6IJR0K Arachis hypogaea HOM05D000159 ORTHO05D000148 6.1e-11 73.2 195 34.9
Medtr8g080670 Medicago truncatula HOM05D000159 ORTHO05D000148 1.4e-10 72.0 186 36.6
GSVIVG01032239001 Vitis vinifera HOM05D000159 ORTHO05D000148 1.4e-10 72.0 272 29.4
AL1G40770 Arabidopsis lyrata HOM05D000159 ORTHO05D000148 3.0e-10 70.9 184 36.4
Medtr8g080690 Medicago truncatula HOM05D000159 ORTHO05D000148 3.0e-10 70.9 183 36.6
HanXRQChr05g0138971 Helianthus annuus HOM05D000159 ORTHO05D000148 8.8e-10 69.3 196 32.7
AT1G27370 Arabidopsis thaliana HOM05D000159 ORTHO05D000148 1.1e-09 68.9 188 35.6
HanXRQChr08g0207891 Helianthus annuus HOM05D000159 ORTHO05D000148 1.5e-09 68.6 274 30.3
Lalb_Chr08g0230591 Lupinus albus HOM05D000159 ORTHO05D000148 1.5e-09 68.6 187 34.2
Psat5g096720 Pisum sativum HOM05D000159 ORTHO05D000148 4.3e-09 67.0 382 28.5
Sp1g23590 Schrenkiella parvula HOM05D000159 ORTHO05D000148 1.7e-08 65.1 183 33.9
CARHR026940 Cardamine hirsuta HOM05D000159 ORTHO05D000148 1.1e-07 62.4 193 33.2
Zm00001eb232050 Zea mays HOM05D000159 ORTHO05D000148 1.8e-07 61.6 195 35.4
AT1G27360 Arabidopsis thaliana HOM05D000159 ORTHO05D000148 3.1e-07 60.8 186 32.3
Psat7g077080 Pisum sativum HOM05D000159 ORTHO05D000148 3.1e-07 60.8 186 33.3
BcaB03g13991 Brassica carinata HOM05D000159 ORTHO05D000148 4.1e-07 60.5 183 32.2
Sed0007989 Sechium edule HOM05D000159 ORTHO05D000148 5.3e-07 60.1 194 33.5
Zm00001eb227180 Zea mays HOM05D000159 ORTHO05D000148 9.1e-07 59.3 192 38.0
Lj5A796G23 Lonicera japonica HOM05D000159 ORTHO05D000148 2.0e-06 58.2 182 29.7
ECA236G4529 Erigeron canadensis HOM05D000159 ORTHO05D000148 3.4e-06 57.4 195 31.3
CDE06G2529 Ceratophyllum demersum HOM05D000001 ORTHO05D010280 4.5e-06 57.0 196 32.1
Cpa.g.sc43.63 Carica papaya HOM05D000159 ORTHO05D000148 5.9e-06 56.6 53 56.6
Carub.0001s2589 Capsella rubella HOM05D000159 ORTHO05D000148 7.7e-06 56.2 185 30.8


User provided reference genes

Program Settings