Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 0.0e+00 1078.2 521 100.0
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 4.0e-221 771.5 573 70.5
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 2.0e-220 769.2 609 67.2
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 9.2e-218 760.4 611 67.1
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.2e-206 723.4 595 64.2
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 6.8e-205 717.6 602 62.8
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 1.5e-204 716.5 631 61.2
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 1.7e-200 703.0 616 61.0
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 9.6e-199 697.2 607 60.3
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 8.1e-198 694.1 604 60.4
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 1.4e-197 693.3 607 60.1
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 1.4e-197 693.3 607 60.8
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 3.1e-197 692.2 532 67.9
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 4.0e-197 691.8 598 61.2
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 1.2e-196 690.3 598 60.5
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 3.4e-196 688.7 607 59.8
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 4.4e-196 688.3 607 60.6
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 5.8e-196 688.0 598 60.4
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 2.9e-195 685.6 573 61.3
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 3.8e-195 685.3 607 60.5
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 6.4e-195 684.5 607 60.6
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 1.4e-194 683.3 606 59.1
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 1.9e-194 682.9 614 59.4
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 3.2e-194 682.2 606 58.9
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 9.3e-194 680.6 583 60.9
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 2.7e-193 679.1 604 59.9
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 1.3e-192 676.8 600 59.3
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 1.1e-191 673.7 608 59.2
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 1.5e-191 673.3 607 58.8
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 2.5e-191 672.5 613 59.2
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 8.1e-190 667.5 597 59.6
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 8.1e-190 667.5 607 59.0
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 2.4e-189 666.0 607 59.0
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 2.6e-188 662.5 607 57.5
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 4.5e-188 661.8 519 67.4
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 5.8e-188 661.4 690 53.0
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 2.1e-185 652.9 614 57.3
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 6.0e-185 651.4 605 58.0
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 3.0e-184 649.0 609 57.1
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 3.9e-184 648.7 595 58.2
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 1.5e-183 646.7 597 58.5
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 1.6e-182 643.3 613 56.6
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 2.8e-182 642.5 606 56.8
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 3.7e-182 642.1 600 55.8
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 4.0e-181 638.6 609 56.5
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 3.4e-180 635.6 521 61.8
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 5.8e-180 634.8 606 57.3
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 7.6e-180 634.4 600 58.0
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 1.3e-179 633.6 600 57.8
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 3.8e-179 632.1 608 55.9
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 6.4e-179 631.3 608 55.8
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 8.4e-179 630.9 608 55.8
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 1.1e-178 630.6 614 56.2
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 1.4e-178 630.2 600 57.7
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.9e-178 629.8 673 51.9
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 4.2e-178 628.6 612 55.9
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 2.1e-177 626.3 603 56.2
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 4.6e-177 625.2 608 55.3
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 7.9e-177 624.4 605 55.9
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 7.9e-177 624.4 594 55.7
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 1.3e-176 623.6 615 55.3
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 6.7e-176 621.3 528 60.0
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 8.7e-176 620.9 609 55.3
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 1.9e-175 619.8 610 55.2
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 9.6e-175 617.5 597 55.9
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 9.6e-175 617.5 578 58.3
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.8e-174 615.9 602 55.6
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 2.4e-173 612.8 605 55.0
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 9.0e-173 610.9 638 53.3
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 1.7e-171 606.7 605 53.6
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 3.8e-171 605.5 617 52.8
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 3.2e-170 602.4 558 57.5
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 7.1e-170 601.3 604 55.1
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 2.3e-168 596.3 597 54.3
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.3e-168 596.3 615 53.0
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.3e-168 596.3 615 53.0
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 3.1e-165 585.9 594 52.5
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 5.3e-165 585.1 312 92.3
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.1e-161 573.2 578 54.2
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 4.6e-161 572.0 563 56.0
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 5.1e-160 568.5 592 52.0
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 5.7e-159 565.1 594 51.7
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 2.6e-156 556.2 521 58.2
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.1e-154 550.8 631 49.9
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 6.1e-153 545.0 556 52.5
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 6.7e-152 541.6 271 94.5
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 6.7e-152 541.6 508 55.9
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 5.9e-148 528.5 538 52.6
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 8.5e-147 524.6 479 59.1
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 3.5e-140 502.7 490 55.9
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 2.1e-137 493.4 383 65.8
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 5.7e-135 485.3 518 52.1
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 1.9e-130 470.3 332 71.1
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 4.2e-130 469.2 459 55.8
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 6.1e-121 438.7 564 44.7
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 5.9e-116 422.2 266 76.3
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 3.9e-115 419.5 483 49.5
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.3e-107 394.4 325 61.5
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 1.7e-107 394.0 545 42.8
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.6e-100 370.9 383 54.3
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 9.9e-95 351.7 867 31.9
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 1.1e-88 331.6 979 27.9
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 1.4e-88 331.3 991 29.1
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.8e-88 330.9 905 29.7
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 4.0e-88 329.7 382 48.7
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.7e-84 317.0 917 27.9
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.0e-83 315.1 327 54.1
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 5.1e-75 286.2 234 66.7
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.9e-70 270.4 260 56.5
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.1e-66 258.5 291 48.8
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 2.1e-57 227.6 249 45.0
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 2.2e-54 217.6 196 60.2
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 1.1e-45 188.7 108 83.3
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 8.5e-38 162.5 105 79.0
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 1.2e-18 99.0 226 27.4
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 4.4e-18 97.1 124 45.2
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 2.4e-16 91.3 124 43.5
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 7.0e-16 89.7 280 27.1
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 8.5e-14 82.8 68 57.4
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 2.1e-12 78.2 53 77.4
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 7.5e-10 69.7 36 86.1
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 2.2e-09 68.2 48 70.8
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 2.2e-09 68.2 313 23.3
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 4.1e-08 63.9 96 40.6
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 2.9e-06 57.8 49 53.1


User provided reference genes

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