Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007046g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.0e-114 414.5 209 100.0
Nitab4.5_0002141g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.7e-88 328.9 205 82.4
Nitab4.5_0012917g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-75 287.0 165 86.1
Nitab4.5_0000091g0370 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.5e-70 267.7 184 75.0
Nitab4.5_0005642g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-63 247.3 175 74.3
Nitab4.5_0011589g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.2e-63 245.0 175 74.9
Nitab4.5_0001899g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.1e-58 228.4 131 87.0
Nitab4.5_0002219g0080 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.8e-51 204.5 172 66.3
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 5.6e-49 198.4 208 50.5
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-45 186.4 160 55.6
Nitab4.5_0003349g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-44 184.1 163 55.2
Nitab4.5_0016697g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-42 176.8 106 83.0
Nitab4.5_0014025g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.3e-42 176.4 166 60.2
Nitab4.5_0000570g0170 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.3e-41 172.6 169 52.7
Nitab4.5_0002942g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.6e-41 171.0 94 88.3
Nitab4.5_0005624g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.6e-38 162.9 173 58.4
Nitab4.5_0011868g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.2e-36 155.6 175 45.7
Nitab4.5_0000015g0360 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-35 153.7 137 54.0
Nitab4.5_0019635g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-34 149.1 78 91.0
Sopen04g022620 Solanum pennellii HOM05D002261 ORTHO05D002334 6.6e-34 148.3 132 54.5
Sopen09g011030 Solanum pennellii HOM05D002261 ORTHO05D002334 6.6e-34 148.3 131 55.0
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 8.7e-34 147.9 123 58.5
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.5e-33 147.1 155 47.7
Nitab4.5_0000600g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.3e-33 146.0 152 46.7
Solyc03g044833.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 7.3e-33 144.8 130 55.4
Nitab4.5_0009754g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.2e-32 141.7 111 68.5
PGSC0003DMG400024382 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.5e-30 135.6 115 54.8
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.9e-30 134.4 194 37.1
Sopen02g008580 Solanum pennellii HOM05D002261 ORTHO05D002334 9.9e-30 134.4 119 53.8
Peaxi162Scf00020g01022 Petunia axillaris HOM05D002261 ORTHO05D002334 3.8e-29 132.5 163 44.2
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.4e-29 131.7 175 39.4
Nitab4.5_0000119g0230 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.9e-28 130.2 152 46.1
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 2.4e-28 129.8 163 44.2
PGSC0003DMG400026495 Solanum tuberosum HOM05D002261 ORTHO05D026165 1.6e-27 127.1 168 45.2
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 4.6e-27 125.6 163 42.9
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 6.0e-27 125.2 191 40.8
Nitab4.5_0001755g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.9e-27 124.8 182 45.6
Nitab4.5_0009878g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-25 120.6 64 92.2
Nitab4.5_0001372g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-24 117.1 161 40.4
Nitab4.5_0013711g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.1e-24 116.7 67 79.1
Sopen06g019020 Solanum pennellii HOM05D002261 ORTHO05D002334 2.1e-24 116.7 94 57.4
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.8e-24 116.3 164 36.6
Nitab4.5_0002942g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.7e-24 115.9 93 68.8
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 3.7e-24 115.9 165 37.0
Nitab4.5_0001280g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.0e-23 112.5 179 36.9
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.0e-22 110.2 164 34.1
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 5.8e-22 108.6 164 37.2
PGSC0003DMG402010367 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.8e-22 108.6 160 35.6
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-21 107.1 157 36.3
PGSC0003DMG400021867 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.8e-21 105.9 164 35.4
Peaxi162Scf00434g00033 Petunia axillaris HOM05D002261 ORTHO05D002334 6.5e-21 105.1 163 37.4
Nitab4.5_0009868g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.2e-20 102.4 163 35.6
Peaxi162Scf00224g00009 Petunia axillaris HOM05D002261 ORTHO05D002334 1.6e-19 100.5 133 40.6
Peaxi162Scf00528g00122 Petunia axillaris HOM05D002261 ORTHO05D002334 2.1e-19 100.1 167 37.1
Nitab4.5_0002588g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-18 95.9 155 38.7
CAN.G129.27 Capsicum annuum HOM05D002261 ORTHO05D000137 1.1e-15 87.8 149 32.2
PGSC0003DMG400029865 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.0e-15 85.9 138 32.6
Nitab4.5_0011520g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.3e-15 85.5 94 46.8
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 1.5e-14 84.0 122 39.3
Solyc09g015140.2 Solanum lycopersicum HOM05D002261 ORTHO05D002334 3.4e-14 82.8 134 33.6
Nitab4.5_0007866g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-13 80.5 92 42.4
Nitab4.5_0000250g0180 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.2e-13 80.1 115 40.0
Nitab4.5_0003285g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.4e-13 78.2 83 44.6
PGSC0003DMG400033169 Solanum tuberosum HOM05D002261 ORTHO05D002334 8.4e-13 78.2 123 32.5
CANSAT35G0072 Cannabis sativa HOM05D006612 ORTHO05D010384 2.5e-12 76.6 171 31.6
Peaxi162Scf00752g00055 Petunia axillaris HOM05D002261 ORTHO05D002334 2.5e-12 76.6 92 46.7
Nitab4.5_0011586g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.2e-12 76.3 140 33.6
PGSC0003DMG401017944 Solanum tuberosum HOM05D002261 ORTHO05D024797 3.2e-12 76.3 94 45.7
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 4.2e-12 75.9 97 41.2
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 4.2e-12 75.9 97 41.2
Nitab4.5_0008074g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.5e-12 75.5 50 74.0
Peaxi162Scf00044g00014 Petunia axillaris HOM05D002261 ORTHO05D002334 5.5e-12 75.5 66 53.0
Peaxi162Scf00752g00068 Petunia axillaris HOM05D002261 ORTHO05D002334 5.5e-12 75.5 92 45.7
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 5.5e-12 75.5 164 29.3
Nitab4.5_0000941g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.3e-12 74.7 107 36.4
Nitab4.5_0000517g0100 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.1e-11 73.6 94 38.3
Nitab4.5_0019514g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.1e-11 73.6 38 92.1
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 7.9e-11 71.6 133 29.3
Atru.chr8.1160 Acer truncatum HOM05D006612 ORTHO05D010384 1.3e-10 70.9 180 28.3
Nitab4.5_0009143g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.8e-10 70.5 116 33.6
CAN.G352.57 Capsicum annuum HOM05D002261 ORTHO05D002334 2.3e-10 70.1 158 32.3
Nitab4.5_0001879g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.3e-10 70.1 171 30.4
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 1.1e-09 67.8 158 28.5
Nitab4.5_0004688g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-09 67.8 58 62.1
Nitab4.5_0007445g0050 Nicotiana tabacum HOM05D014441 ORTHO05D016353 1.1e-09 67.8 102 36.3
Nitab4.5_0003011g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-09 67.4 73 46.6
CAN.G352.58 Capsicum annuum HOM05D002261 ORTHO05D002334 1.9e-09 67.0 162 31.5
PGSC0003DMG400041066 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.9e-09 67.0 103 29.1
vmacro23315 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 1.9e-09 67.0 158 30.4
CAN.G339.20 Capsicum annuum HOM05D002261 ORTHO05D002334 2.5e-09 66.6 95 37.9
Nitab4.5_0000901g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.7e-09 65.5 173 31.2
Peaxi162Scf00308g00076 Petunia axillaris HOM05D002261 ORTHO05D002334 7.4e-09 65.1 128 34.4
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 9.7e-09 64.7 163 28.2
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 1.3e-08 64.3 190 27.4
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 3.7e-08 62.8 171 25.1
Haze_01485 Corylus avellana HOM05D006612 ORTHO05D010384 6.3e-08 62.0 179 27.4
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 8.2e-08 61.6 156 26.3
Nitab4.5_0003349g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-07 61.2 175 29.1
Nitab4.5_0009976g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.8e-07 60.5 170 26.5
CAN.G223.2 Capsicum annuum HOM05D002261 ORTHO05D002334 4.1e-07 59.3 169 27.8
Solyc08g062250.3 Solanum lycopersicum HOM05D002538 ORTHO05D002334 6.9e-07 58.5 70 44.3
Peaxi162Scf01253g00023 Petunia axillaris HOM05D002261 ORTHO05D002334 2.0e-06 57.0 56 51.8
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 2.0e-06 57.0 188 22.9
Peaxi162Scf00033g00212 Petunia axillaris HOM05D002261 ORTHO05D002334 3.4e-06 56.2 42 64.3
CAN.G315.7 Capsicum annuum HOM05D002261 ORTHO05D002334 4.5e-06 55.8 131 29.8
Peaxi162Scf00111g00518 Petunia axillaris HOM05D002261 ORTHO05D002334 4.5e-06 55.8 40 65.0
Solyc01g066612.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 7.7e-06 55.1 63 41.3
Nitab4.5_0000958g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.0e-05 54.7 30 83.3


User provided reference genes

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