Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006934g0010 Nicotiana tabacum HOM05D005636 ORTHO05D006912 7.9e-202 706.8 339 100.0
Nitab4.5_0000446g0070 Nicotiana tabacum HOM05D005636 ORTHO05D006912 7.4e-168 594.0 339 86.1
Peaxi162Scf00807g00219 Petunia axillaris HOM05D005636 ORTHO05D006912 1.2e-144 516.9 339 76.1
PGSC0003DMG400007795 Solanum tuberosum HOM05D005636 ORTHO05D006912 3.3e-139 498.8 339 74.6
Sopen12g006380 Solanum pennellii HOM05D005636 ORTHO05D006912 1.8e-137 493.0 339 73.5
Solyc12g011020.2 Solanum lycopersicum HOM05D005636 ORTHO05D006912 1.2e-136 490.3 339 73.2
CAN.G164.23 Capsicum annuum HOM05D005636 ORTHO05D006912 1.1e-131 473.8 363 68.3
Nitab4.5_0001675g0040 Nicotiana tabacum HOM05D005636 ORTHO05D006912 3.3e-131 472.2 346 69.1
Nitab4.5_0005557g0010 Nicotiana tabacum HOM05D005636 ORTHO05D006912 2.7e-125 452.6 347 66.3
Sopen07g029330 Solanum pennellii HOM05D005636 ORTHO05D006912 7.3e-123 444.5 348 67.0
PGSC0003DMG400017343 Solanum tuberosum HOM05D005636 ORTHO05D006912 4.0e-121 438.7 348 66.4
Solyc07g055980.3 Solanum lycopersicum HOM05D005636 ORTHO05D006912 8.9e-121 437.6 348 66.1
Peaxi162Scf00111g00031 Petunia axillaris HOM05D005636 ORTHO05D006912 1.2e-117 427.2 336 66.1
Dinv31558 Davidia involucrata HOM05D005636 ORTHO05D006912 6.6e-116 421.4 344 61.9
Oeu020065.1 Olea europaea HOM05D005636 ORTHO05D006912 2.1e-114 416.4 339 63.4
Oeu040028.1 Olea europaea HOM05D005636 ORTHO05D006912 1.4e-113 413.7 341 64.5
SalBow7G3906 Salvia bowleyana HOM05D005636 ORTHO05D006912 4.0e-113 412.1 336 62.8
Cc05_g09330 Coffea canephora HOM05D005636 ORTHO05D006912 5.8e-112 408.3 342 62.3
CAN.G585.52 Capsicum annuum HOM05D005636 ORTHO05D006912 1.5e-107 393.7 264 72.0
SGA_v2.0_scaffold130G34360 Striga asiatica HOM05D005636 ORTHO05D006912 1.2e-106 390.6 337 60.8
CSS0038062 Camellia sinensis var. sinensis HOM05D005636 ORTHO05D006912 3.6e-106 389.0 343 59.8
Actinidia11200 Actinidia chinensis HOM05D005636 ORTHO05D006912 5.2e-105 385.2 349 59.6
Migut.M00513 Erythranthe guttata HOM05D005636 ORTHO05D006912 1.7e-103 380.2 348 58.3
Hma1.2p1_0722F.1_g208750 Hydrangea macrophylla HOM05D005636 ORTHO05D006912 1.7e-100 370.2 349 56.2
Rhsim06G0118100 Rhododendron simsii HOM05D005636 ORTHO05D006912 4.3e-99 365.5 387 53.2
MSTRG.6754 Avicennia marina HOM05D005636 ORTHO05D006912 5.6e-99 365.2 313 61.0
Cpa.g.sc50.79 Carica papaya HOM05D005636 ORTHO05D006912 6.2e-98 361.7 349 55.9
MD17G1140200 Malus domestica HOM05D005636 ORTHO05D006912 6.2e-98 361.7 352 57.1
Ciclev10031950m.g Citrus clementina HOM05D005636 ORTHO05D006912 8.1e-98 361.3 354 56.8
MD09G1152800 Malus domestica HOM05D005636 ORTHO05D006912 2.6e-96 356.3 348 55.5
SalBow7G1748 Salvia bowleyana HOM05D005636 ORTHO05D006912 1.3e-95 354.0 220 75.5
Sabra02G0049100 Salix brachista HOM05D005636 ORTHO05D006912 6.4e-95 351.7 336 56.2
Thecc.01G161100 Theobroma cacao HOM05D005636 ORTHO05D006912 2.4e-94 349.7 354 54.5
CsaV3_6G038020 Cucumis sativus L. HOM05D005636 ORTHO05D006912 4.2e-94 349.0 344 53.2
Eucgr.K01200 Eucalyptus grandis HOM05D005636 ORTHO05D006912 7.1e-94 348.2 299 59.9
FAN14G2746 Fragaria x ananassa HOM05D005636 ORTHO05D006912 9.3e-94 347.8 347 57.1
Potri.002G060600 Populus trichocarpa HOM05D005636 ORTHO05D006912 2.1e-93 346.7 341 56.0
MELO3C014464.2 Cucumis melo HOM05D005636 ORTHO05D006912 2.7e-93 346.3 334 53.3
Duzib187G1993 Durio zibethinus HOM05D005636 ORTHO05D006912 1.3e-92 344.0 351 54.1
FvH4_6g38130 Fragaria vesca HOM05D005636 ORTHO05D006912 1.3e-92 344.0 357 55.2
Atru.chr1.3606 Acer truncatum HOM05D005636 ORTHO05D006912 1.7e-92 343.6 349 53.9
HanXRQChr12g0369761 Helianthus annuus HOM05D005636 ORTHO05D006912 1.7e-92 343.6 229 69.4
HanXRQChr13g0387431 Helianthus annuus HOM05D005636 ORTHO05D006912 2.3e-92 343.2 331 54.1
Manes.02G084000 Manihot esculenta HOM05D005636 ORTHO05D006912 2.3e-92 343.2 349 53.9
Phvul.002G231100 Phaseolus vulgaris HOM05D005636 ORTHO05D006912 3.0e-92 342.8 352 51.1
Phvul.005G057920 Phaseolus vulgaris HOM05D005636 ORTHO05D006912 3.0e-92 342.8 352 50.3
FAN05G0596 Fragaria x ananassa HOM05D005636 ORTHO05D006912 3.9e-92 342.4 356 55.9
FAN09G4115 Fragaria x ananassa HOM05D005636 ORTHO05D006912 3.9e-92 342.4 357 54.1
Sabra05G0153000 Salix brachista HOM05D005636 ORTHO05D006912 8.7e-92 341.3 220 71.4
Lj6g0012077 Lotus japonicus HOM05D005636 ORTHO05D006912 1.1e-91 340.9 354 51.7
ECA233G1750 Erigeron canadensis HOM05D005636 ORTHO05D006912 1.9e-91 340.1 220 71.8
RcHm_v2.0_Chr2g0151351 Rosa chinensis HOM05D005636 ORTHO05D006912 2.5e-91 339.7 357 53.5
Potri.005G201100 Populus trichocarpa HOM05D005636 ORTHO05D006912 3.3e-91 339.3 220 71.4
Lsat_1_v5_gn_8_32020 Lactuca sativa HOM05D005636 ORTHO05D006912 4.3e-91 339.0 222 70.3
Glyma.20G056400 Glycine max HOM05D005636 ORTHO05D006912 9.6e-91 337.8 353 50.1
COL.COLO4_33742 Corchorus olitorius HOM05D005636 ORTHO05D006912 1.3e-90 337.4 352 53.4
GSVIVG01000791001 Vitis vinifera HOM05D005636 ORTHO05D006912 2.1e-90 336.7 220 71.4
Prupe.3G171400 Prunus persica HOM05D005636 ORTHO05D006912 6.2e-90 335.1 321 57.6
Gohir.D04G036900 Gossypium hirsutum HOM05D005636 ORTHO05D006912 1.4e-89 334.0 342 54.1
TPR.G37891 Trifolium pratense HOM05D005636 ORTHO05D006912 1.4e-89 334.0 340 52.6
Cfa022913 Carpinus fangiana HOM05D005636 ORTHO05D006912 3.1e-89 332.8 220 71.4
Gohir.A05G378700 Gossypium hirsutum HOM05D005636 ORTHO05D006912 4.0e-89 332.4 343 54.2
Gorai.012G041700 Gossypium raimondii HOM05D005636 ORTHO05D006912 5.3e-89 332.0 342 53.8
Sed0000049 Sechium edule HOM05D005636 ORTHO05D006912 5.3e-89 332.0 301 56.1
ClCG09G022370 Citrullus lanatus HOM05D005636 ORTHO05D006912 2.0e-88 330.1 355 49.3
Medtr1g046360 Medicago truncatula HOM05D005636 ORTHO05D006912 9.9e-88 327.8 340 52.1
Aa31LG10G13390 Aethionema arabicum HOM05D005636 ORTHO05D006912 6.4e-87 325.1 256 60.9
Lalb_Chr04g0257641 Lupinus albus HOM05D005636 ORTHO05D006912 6.4e-87 325.1 220 68.6
Psat5g112320 Pisum sativum HOM05D005636 ORTHO05D006912 8.4e-87 324.7 355 51.3
Lalb_Chr17g0335961 Lupinus albus HOM05D005636 ORTHO05D006912 1.1e-86 324.3 328 53.0
CARHR169230 Cardamine hirsuta HOM05D005636 ORTHO05D006912 2.4e-86 323.2 335 51.6
Ca_16256_v3 Cicer arietinum L. HOM05D005636 ORTHO05D006912 2.4e-86 323.2 354 50.6
PGR142G4384 Punica granatum HOM05D005636 ORTHO05D006912 3.2e-86 322.8 369 50.4
Medtr3g079530 Medicago truncatula HOM05D005636 ORTHO05D006912 7.1e-86 321.6 340 51.2
BraA07t30084Z Brassica rapa HOM05D005636 ORTHO05D006912 1.6e-85 320.5 225 65.8
TAR627G0895 Trochodendron aralioides HOM05D005636 ORTHO05D006912 3.5e-85 319.3 344 49.1
BcaC08g44944 Brassica carinata HOM05D005636 ORTHO05D006912 7.9e-85 318.2 220 66.8
Carub.0005s2561 Capsella rubella HOM05D005636 ORTHO05D006912 7.9e-85 318.2 339 50.4
Thhalv10006084m.g Eutrema salsugineum HOM05D005636 ORTHO05D006912 7.9e-85 318.2 225 64.4
QL08p044016 Quercus lobata HOM05D005636 ORTHO05D006912 7.9e-85 318.2 315 56.5
THA.LOC104802275 Tarenaya hassleriana HOM05D005636 ORTHO05D006912 1.0e-84 317.8 255 60.4
CAN.G732.7 Capsicum annuum HOM05D005636 ORTHO05D006912 1.8e-84 317.0 203 76.8
A07p24370 Brassica napus HOM05D005636 ORTHO05D006912 3.9e-84 315.8 341 49.6
C06p25760 Brassica napus HOM05D005636 ORTHO05D006912 3.9e-84 315.8 342 49.7
BolC6t37738H Brassica oleracea HOM05D005636 ORTHO05D006912 3.9e-84 315.8 342 49.7
Sp5g04030 Schrenkiella parvula HOM05D005636 ORTHO05D006912 8.7e-84 314.7 336 51.2
AL5G40630 Arabidopsis lyrata HOM05D005636 ORTHO05D006912 1.9e-83 313.5 329 51.7
CiPaw.03G189200 Carya illinoinensis HOM05D005636 ORTHO05D006912 2.5e-83 313.2 220 68.2
BcaB02g07496 Brassica carinata HOM05D005636 ORTHO05D006912 3.3e-83 312.8 344 48.0
Aqoxy1G01878 Aquilegia oxysepala HOM05D005636 ORTHO05D006912 1.6e-82 310.5 342 48.2
AT3G58830 Arabidopsis thaliana HOM05D005636 ORTHO05D006912 2.1e-82 310.1 347 49.3
Nn6g34386 Nelumbo nucifera HOM05D005636 ORTHO05D006912 2.1e-82 310.1 369 46.3
arahy.Tifrunner.gnm1.ann1.59ND6F Arachis hypogaea HOM05D005636 ORTHO05D006912 2.8e-82 309.7 385 45.7
PSO675G1578 Papaver somniferum HOM05D005636 ORTHO05D006912 8.1e-82 308.1 219 63.5
VMungo0540G1884 Vigna mungo HOM05D005636 ORTHO05D006912 1.8e-81 307.0 315 52.1
PSO541G3223 Papaver somniferum HOM05D005636 ORTHO05D006912 5.3e-81 305.4 219 62.6
VMungo0540G1461 Vigna mungo HOM05D005636 ORTHO05D006912 2.6e-80 303.1 316 50.9
THA.LOC104803221 Tarenaya hassleriana HOM05D005636 ORTHO05D006912 3.4e-80 302.8 342 49.4
vmacro12452 Vaccinium macrocarpon HOM05D005636 ORTHO05D006912 5.8e-80 302.0 286 55.2
Hma1.2p1_0888F.1_g232810 Hydrangea macrophylla HOM05D005636 ORTHO05D006912 1.7e-79 300.4 323 52.0
unitig_0.g2024 Utricularia gibba HOM05D005636 ORTHO05D006912 1.1e-78 297.7 222 61.7
SGA_v2.0_scaffold70G23671 Striga asiatica HOM05D005636 ORTHO05D006912 1.6e-74 283.9 355 48.5
TWI59G0166 Tripterygium wilfordii HOM05D005636 ORTHO05D006912 4.8e-74 282.3 346 47.1
BcaC08g44945 Brassica carinata HOM05D005636 ORTHO05D006912 4.0e-73 279.3 342 45.9
Sc14g0000770 Simmondsia chinensis HOM05D005636 ORTHO05D006912 1.0e-71 274.6 211 60.2
ATR0763G116 Amborella trichopoda HOM05D005636 ORTHO05D006912 2.2e-71 273.5 214 57.5
EL10Ac8g19235 Beta vulgaris HOM05D005636 ORTHO05D006912 3.5e-69 266.2 232 56.5
SEGI_36348 Sequoiadendron giganteum HOM05D005636 ORTHO05D006912 4.6e-69 265.8 212 59.0
CDE08G0457 Ceratophyllum demersum HOM05D005636 ORTHO05D006912 3.0e-68 263.1 212 56.1
arahy.Tifrunner.gnm1.ann1.LGDT7B Arachis hypogaea HOM05D005636 ORTHO05D006912 3.9e-68 262.7 166 72.9
AagrBONN_evm.TU.Sc2ySwM_228.4819 Anthoceros agrestis HOM05D005636 ORTHO05D006912 2.2e-66 256.9 214 56.1
AUR62033992 Chenopodium quinoa HOM05D005636 ORTHO05D006912 2.8e-66 256.5 214 54.2
Os01g0796500 Oryza sativa ssp. japonica HOM05D005636 ORTHO05D006912 1.1e-65 254.6 222 53.6
Ah.04g158730 Amaranthus hybridus HOM05D005636 ORTHO05D006912 4.1e-65 252.7 214 56.1
AUR62027489 Chenopodium quinoa HOM05D005636 ORTHO05D006912 3.4e-64 249.6 214 53.3
Pp3c4_17380 Physcomitrium patens HOM05D005636 ORTHO05D006912 8.5e-63 245.0 211 52.6
MSTRG.14295 Avicennia marina HOM05D005636 ORTHO05D006912 6.1e-61 238.8 150 74.0
HPP92_010206 Vanilla planifolia HOM05D002349 ORTHO05D002464 1.8e-60 237.3 199 56.8
SMO367G0867 Selaginella moellendorffii HOM05D005636 ORTHO05D006912 1.1e-59 234.6 215 51.2
Haze_13492 Corylus avellana HOM05D005636 ORTHO05D006912 5.7e-59 232.3 277 49.1
Mapoly0095s0041 Marchantia polymorpha HOM05D005636 ORTHO05D006912 1.3e-58 231.1 214 51.4
Lj1A625T29 Lonicera japonica HOM05D005636 ORTHO05D006912 8.2e-58 228.4 249 49.0
Actinidia32519 Actinidia chinensis HOM05D005636 ORTHO05D006912 1.1e-57 228.0 246 50.8
CANSAT64G2722 Cannabis sativa HOM05D005636 ORTHO05D006912 1.8e-57 227.3 150 72.7
CBR_g66789 Chara braunii HOM05D005636 ORTHO05D006912 3.6e-53 213.0 183 54.1
Cre04.g219900 Chlamydomonas reinhardtii HOM05D005636 ORTHO05D006912 1.3e-50 204.5 219 44.3
DCAR_009796 Daucus carota HOM05D005636 ORTHO05D006912 8.0e-45 185.3 341 36.7
PRCOL_00003225 Prasinoderma coloniale HOM05D005636 ORTHO05D006912 2.1e-37 160.6 235 37.9
MCO16G670 Micromonas commoda HOM05D005636 ORTHO05D006912 2.3e-36 157.1 164 44.5
RcHm_v2.0_Chr2g0151251 Rosa chinensis HOM05D005636 ORTHO05D006912 1.2e-35 154.8 93 78.5
AagrBONN_evm.TU.Sc2ySwM_344.2384 Anthoceros agrestis HOM05D005636 ORTHO05D006912 7.7e-32 142.1 119 54.6
Zm00001eb150880 Zea mays HOM05D005636 ORTHO05D006912 5.9e-24 115.9 103 50.5
CAN.G44.13 Capsicum annuum HOM05D005636 ORTHO05D006912 5.0e-23 112.8 68 77.9
AagrBONN_evm.TU.Sc2ySwM_344.2381 Anthoceros agrestis HOM05D005636 ORTHO05D006912 9.5e-22 108.6 91 52.7
CAN.G1530.4 Capsicum annuum HOM05D005636 ORTHO05D017742 3.2e-17 93.6 58 75.9
Cfa023890 Carpinus fangiana HOM05D005636 ORTHO05D123467 2.0e-08 64.3 91 40.7
A04p02350 Brassica napus HOM05D005636 ORTHO05D006912 1.0e-07 62.0 53 58.5
VMungo0720G3119 Vigna mungo HOM05D000196 ORTHO05D001288 4.3e-06 56.6 38 71.1


User provided reference genes

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