Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006843g0050 Nicotiana tabacum HOM05D000937 ORTHO05D000787 7.0e-33 143.3 68 100.0
Nitab4.5_0000872g0100 Nicotiana tabacum HOM05D000937 ORTHO05D000787 9.4e-22 106.3 72 69.4
Nitab4.5_0000872g0070 Nicotiana tabacum HOM05D000937 ORTHO05D000787 2.1e-21 105.1 72 70.8
Nitab4.5_0006843g0010 Nicotiana tabacum HOM05D000937 ORTHO05D000787 4.0e-20 100.9 76 65.8
Peaxi162Scf00160g01767 Petunia axillaris HOM05D000937 ORTHO05D000787 1.1e-14 82.8 64 62.5
COL.COLO4_13774 Corchorus olitorius HOM05D000937 ORTHO05D000787 3.6e-13 77.8 64 59.4
COL.COLO4_13752 Corchorus olitorius HOM05D000937 ORTHO05D000787 6.1e-13 77.0 72 52.8
Nitab4.5_0000677g0170 Nicotiana tabacum HOM05D000937 ORTHO05D000787 2.3e-12 75.1 67 52.2
COL.COLO4_13770 Corchorus olitorius HOM05D000937 ORTHO05D000787 3.0e-12 74.7 63 57.1
CSS0027154 Camellia sinensis var. sinensis HOM05D000937 ORTHO05D000787 4.0e-12 74.3 64 56.2
Prupe.8G041600 Prunus persica HOM05D000937 ORTHO05D000787 4.0e-12 74.3 67 55.2
CiPaw.07G235100 Carya illinoinensis HOM05D000937 ORTHO05D000787 6.8e-12 73.6 69 47.8
Eucgr.F04184 Eucalyptus grandis HOM05D000937 ORTHO05D000787 6.8e-12 73.6 70 54.3
Eucgr.L02340 Eucalyptus grandis HOM05D000937 ORTHO05D000787 6.8e-12 73.6 70 54.3
Gohir.A01G122800 Gossypium hirsutum HOM05D000937 ORTHO05D000787 6.8e-12 73.6 70 52.9
Manes.18G095100 Manihot esculenta HOM05D000937 ORTHO05D000787 6.8e-12 73.6 64 54.7
TAR628G1643 Trochodendron aralioides HOM05D000937 ORTHO05D000787 6.8e-12 73.6 67 52.2
AL1G48560 Arabidopsis lyrata HOM05D000937 ORTHO05D000787 8.8e-12 73.2 70 54.3
Eucgr.L02339 Eucalyptus grandis HOM05D000937 ORTHO05D000787 8.8e-12 73.2 70 52.9
CiPaw.07G235200 Carya illinoinensis HOM05D000937 ORTHO05D000787 1.2e-11 72.8 69 47.8
COL.COLO4_13751 Corchorus olitorius HOM05D000937 ORTHO05D000787 1.2e-11 72.8 70 52.9
Duzib093G1479 Durio zibethinus HOM05D000937 ORTHO05D000787 1.2e-11 72.8 70 51.4
BcaB04g17905 Brassica carinata HOM05D000937 ORTHO05D000787 4.4e-11 70.9 70 51.4
Cpa.g.sc26.79 Carica papaya HOM05D000937 ORTHO05D000787 4.4e-11 70.9 70 48.6
MD10G1035600 Malus domestica HOM05D000937 ORTHO05D000787 4.4e-11 70.9 66 51.5
ECA232G0559 Erigeron canadensis HOM05D000296 ORTHO05D000787 5.7e-11 70.5 69 44.9
Gohir.D01G110600 Gossypium hirsutum HOM05D000937 ORTHO05D000787 5.7e-11 70.5 70 51.4
TWI60G0111 Tripterygium wilfordii HOM05D000937 ORTHO05D000787 5.7e-11 70.5 65 50.8
Carub.0001s3215 Capsella rubella HOM05D000937 ORTHO05D000787 7.5e-11 70.1 64 54.7
Ciclev10003681m.g Citrus clementina HOM05D000937 ORTHO05D000787 9.8e-11 69.7 64 50.0
MD05G1033800 Malus domestica HOM05D000937 ORTHO05D000787 9.8e-11 69.7 67 49.3
Nitab4.5_0001319g0010 Nicotiana tabacum HOM05D000937 ORTHO05D000787 9.8e-11 69.7 65 50.8
Cpa.g.sc26.99 Carica papaya HOM05D000937 ORTHO05D000787 1.7e-10 68.9 64 51.6
AT1G34060 Arabidopsis thaliana HOM05D000937 ORTHO05D000787 2.2e-10 68.6 64 54.7
CARHR033490 Cardamine hirsuta HOM05D000937 ORTHO05D000787 2.2e-10 68.6 70 50.0
QL02p037904 Quercus lobata HOM05D000937 ORTHO05D000787 2.2e-10 68.6 70 45.7
RcHm_v2.0_Chr6g0274191 Rosa chinensis HOM05D000937 ORTHO05D000787 2.2e-10 68.6 68 51.5
Sabra02G0051200 Salix brachista HOM05D000937 ORTHO05D000787 2.2e-10 68.6 71 49.3
vmacro01496 Vaccinium macrocarpon HOM05D000937 ORTHO05D000787 2.2e-10 68.6 70 50.0
Dinv25901 Davidia involucrata HOM05D000937 ORTHO05D000787 2.8e-10 68.2 64 46.9
CSS0026273 Camellia sinensis var. sinensis HOM05D000937 ORTHO05D000787 3.7e-10 67.8 70 45.7
Duzib116G0094 Durio zibethinus HOM05D000937 ORTHO05D000787 3.7e-10 67.8 70 47.1
Thhalv10007588m.g Eutrema salsugineum HOM05D000937 ORTHO05D000787 3.7e-10 67.8 61 55.7
Glyma.16G162300 Glycine max HOM05D000937 ORTHO05D000787 3.7e-10 67.8 64 50.0
MBI01_g34169_MAGBIO Magnolia biondii HOM05D000937 ORTHO05D000787 3.7e-10 67.8 67 50.7
MD10G1035800 Malus domestica HOM05D000937 ORTHO05D000787 3.7e-10 67.8 63 52.4
Nitab4.5_0000677g0180 Nicotiana tabacum HOM05D000937 ORTHO05D282995 3.7e-10 67.8 67 47.8
Sp1g29330 Schrenkiella parvula HOM05D000937 ORTHO05D000787 3.7e-10 67.8 73 46.6
BolC8t47877H Brassica oleracea HOM05D000937 ORTHO05D000787 4.8e-10 67.4 70 50.0
Gohir.A07G154100 Gossypium hirsutum HOM05D000937 ORTHO05D000787 4.8e-10 67.4 64 50.0
HanXRQChr11g0328761 Helianthus annuus HOM05D000937 ORTHO05D000787 4.8e-10 67.4 64 46.9
HanXRQChr11g0328811 Helianthus annuus HOM05D000937 ORTHO05D000787 4.8e-10 67.4 64 46.9
HanXRQChr11g0328821 Helianthus annuus HOM05D000937 ORTHO05D000787 4.8e-10 67.4 64 46.9
HanXRQChr11g0328861 Helianthus annuus HOM05D000937 ORTHO05D000787 4.8e-10 67.4 64 46.9
HanXRQChr11g0328921 Helianthus annuus HOM05D000937 ORTHO05D000787 4.8e-10 67.4 64 46.9
HanXRQChr11g0328931 Helianthus annuus HOM05D000937 ORTHO05D000787 4.8e-10 67.4 64 46.9
HanXRQChr12g0383321 Helianthus annuus HOM05D000937 ORTHO05D000787 4.8e-10 67.4 64 46.9
Oeu002072.1 Olea europaea HOM05D000937 ORTHO05D000787 4.8e-10 67.4 65 47.7
A08p08380 Brassica napus HOM05D000937 ORTHO05D000787 6.3e-10 67.0 70 50.0
BraA08t32854Z Brassica rapa HOM05D000937 ORTHO05D000787 6.3e-10 67.0 70 50.0
Dinv02462 Davidia involucrata HOM05D000937 ORTHO05D000787 6.3e-10 67.0 64 48.4
Eucgr.F04186 Eucalyptus grandis HOM05D000937 ORTHO05D000787 6.3e-10 67.0 60 53.3
Gohir.D07G160500 Gossypium hirsutum HOM05D000937 ORTHO05D000787 6.3e-10 67.0 63 50.8
Gorai.001G183500 Gossypium raimondii HOM05D000937 ORTHO05D000787 6.3e-10 67.0 63 50.8
HanXRQChr11g0328831 Helianthus annuus HOM05D000937 ORTHO05D000787 6.3e-10 67.0 64 46.9
HanXRQChr11g0342951 Helianthus annuus HOM05D000937 ORTHO05D000787 6.3e-10 67.0 64 48.4
ECA233G2760 Erigeron canadensis HOM05D000937 ORTHO05D000787 8.3e-10 66.6 61 52.5
HanXRQChr11g0328871 Helianthus annuus HOM05D000937 ORTHO05D000787 8.3e-10 66.6 64 46.9
RcHm_v2.0_Chr6g0274171 Rosa chinensis HOM05D000937 ORTHO05D000787 8.3e-10 66.6 68 51.5
CANSAT25G3691 Cannabis sativa HOM05D000937 ORTHO05D000787 1.1e-09 66.2 64 48.4
Migut.C00136 Erythranthe guttata HOM05D000937 ORTHO05D000787 1.1e-09 66.2 64 46.9
Glyma.02G077600 Glycine max HOM05D000937 ORTHO05D000787 1.1e-09 66.2 64 50.0
Glyma.16G160600 Glycine max HOM05D000937 ORTHO05D000787 1.1e-09 66.2 64 48.4
HanXRQChr13g0391711 Helianthus annuus HOM05D000937 ORTHO05D000787 1.1e-09 66.2 64 46.9
HanXRQChr13g0391741 Helianthus annuus HOM05D000937 ORTHO05D000787 1.1e-09 66.2 64 46.9
Thecc.08G159900 Theobroma cacao HOM05D000937 ORTHO05D000787 1.1e-09 66.2 70 47.1
CARHR033440 Cardamine hirsuta HOM05D000937 ORTHO05D000787 1.4e-09 65.9 70 48.6
HanXRQChr11g0342921 Helianthus annuus HOM05D000937 ORTHO05D000787 1.4e-09 65.9 73 43.8
MD10G1035100 Malus domestica HOM05D000937 ORTHO05D000787 1.4e-09 65.9 64 50.0
Actinidia29551 Actinidia chinensis HOM05D000937 ORTHO05D000787 1.8e-09 65.5 73 41.1
Thhalv10010020m.g Eutrema salsugineum HOM05D000937 ORTHO05D000787 1.8e-09 65.5 61 54.1
MSTRG.24932 Avicennia marina HOM05D000937 ORTHO05D000787 2.4e-09 65.1 69 44.9
BraA09t38784Z Brassica rapa HOM05D000937 ORTHO05D000787 2.4e-09 65.1 64 51.6
Migut.C00139 Erythranthe guttata HOM05D000937 ORTHO05D000787 2.4e-09 65.1 64 48.4
HanXRQChr11g0328851 Helianthus annuus HOM05D000937 ORTHO05D000787 2.4e-09 65.1 64 45.3
Oeu051285.2 Olea europaea HOM05D000937 ORTHO05D000787 2.4e-09 65.1 70 44.3
PSO210G0618 Papaver somniferum HOM05D000937 ORTHO05D000787 2.4e-09 65.1 65 50.8
Phvul.004G088400 Phaseolus vulgaris HOM05D000937 ORTHO05D000787 2.4e-09 65.1 64 50.0
TWI32G0355 Tripterygium wilfordii HOM05D000937 ORTHO05D000787 2.4e-09 65.1 64 45.3
Actinidia04746 Actinidia chinensis HOM05D000937 ORTHO05D000787 3.1e-09 64.7 73 41.1
arahy.Tifrunner.gnm1.ann1.FXXJ78 Arachis hypogaea HOM05D000937 ORTHO05D000787 3.1e-09 64.7 61 52.5
MSTRG.975 Avicennia marina HOM05D000937 ORTHO05D000787 3.1e-09 64.7 70 47.1
Carub.0001s3212 Capsella rubella HOM05D000937 ORTHO05D000787 3.1e-09 64.7 73 45.2
Cfa012975 Carpinus fangiana HOM05D000937 ORTHO05D000787 3.1e-09 64.7 67 44.8
A09p32430 Brassica napus HOM05D000937 ORTHO05D000787 4.1e-09 64.3 64 51.6
Lsat_1_v5_gn_9_42261 Lactuca sativa HOM05D000937 ORTHO05D000787 4.1e-09 64.3 64 46.9
Potri.002G063800 Populus trichocarpa HOM05D000937 ORTHO05D000787 4.1e-09 64.3 61 45.9
Prupe.8G041100 Prunus persica HOM05D000937 ORTHO05D000787 4.1e-09 64.3 65 49.2
QL02p037418 Quercus lobata HOM05D000937 ORTHO05D000787 4.1e-09 64.3 63 46.0
BcaB07g33026 Brassica carinata HOM05D000937 ORTHO05D000787 5.4e-09 63.9 64 50.0
PGR102G1225 Punica granatum HOM05D000937 ORTHO05D000787 5.4e-09 63.9 65 47.7
arahy.Tifrunner.gnm1.ann1.2HY2G1 Arachis hypogaea HOM05D000937 ORTHO05D000787 7.0e-09 63.5 64 48.4
SalBow7G3761 Salvia bowleyana HOM05D000937 ORTHO05D000787 7.0e-09 63.5 72 45.8
Actinidia29554 Actinidia chinensis HOM05D000937 ORTHO05D000787 9.1e-09 63.2 70 44.3
Aa31LG6G8250 Aethionema arabicum HOM05D000937 ORTHO05D000787 9.1e-09 63.2 61 45.9
CARHR033510 Cardamine hirsuta HOM05D000937 ORTHO05D000787 9.1e-09 63.2 70 45.7
HanXRQChr13g0391681 Helianthus annuus HOM05D000937 ORTHO05D000787 9.1e-09 63.2 64 46.9
AT1G34040 Arabidopsis thaliana HOM05D000937 ORTHO05D000787 1.2e-08 62.8 64 48.4
FvH4_2g13010 Fragaria vesca HOM05D000937 ORTHO05D000787 1.2e-08 62.8 65 49.2
FAN15G1227 Fragaria x ananassa HOM05D000937 ORTHO05D000787 1.2e-08 62.8 65 49.2
FAN20G0403 Fragaria x ananassa HOM05D000937 ORTHO05D000787 1.2e-08 62.8 65 49.2
FAN24G1034 Fragaria x ananassa HOM05D000937 ORTHO05D000787 1.2e-08 62.8 65 49.2
FAN27G0033 Fragaria x ananassa HOM05D000937 ORTHO05D000787 1.2e-08 62.8 65 49.2
Glyma.16G162400 Glycine max HOM05D000937 ORTHO05D000787 1.2e-08 62.8 64 48.4
Prupe.8G041300 Prunus persica HOM05D000937 ORTHO05D000787 1.2e-08 62.8 65 47.7
Aqoxy5G02164 Aquilegia oxysepala HOM05D000937 ORTHO05D000787 1.6e-08 62.4 68 39.7
Eucgr.F04187 Eucalyptus grandis HOM05D000937 ORTHO05D000787 1.6e-08 62.4 70 47.1
Eucgr.L02799 Eucalyptus grandis HOM05D000937 ORTHO05D000787 1.6e-08 62.4 70 47.1
Glyma.16G162500 Glycine max HOM05D000937 ORTHO05D000787 1.6e-08 62.4 64 48.4
Lalb_Chr03g0035501 Lupinus albus HOM05D000937 ORTHO05D000787 1.6e-08 62.4 64 46.9
Rhsim11G0088000 Rhododendron simsii HOM05D000937 ORTHO05D000787 1.6e-08 62.4 70 48.6
BcaC08g43818 Brassica carinata HOM05D000937 ORTHO05D000787 2.0e-08 62.0 64 50.0
C06p12030 Brassica napus HOM05D000937 ORTHO05D000787 2.0e-08 62.0 64 50.0
BolC6t36337H Brassica oleracea HOM05D000937 ORTHO05D000787 2.0e-08 62.0 64 50.0
VMungo0464G0460 Vigna mungo HOM05D000937 ORTHO05D000787 2.0e-08 62.0 64 46.9
arahy.Tifrunner.gnm1.ann1.EF44XV Arachis hypogaea HOM05D000937 ORTHO05D000787 2.7e-08 61.6 64 48.4
arahy.Tifrunner.gnm1.ann1.IS4878 Arachis hypogaea HOM05D000937 ORTHO05D000787 2.7e-08 61.6 57 50.9
GSVIVG01001422001 Vitis vinifera HOM05D000937 ORTHO05D000787 2.7e-08 61.6 64 45.3
Lsat_1_v5_gn_9_42201 Lactuca sativa HOM05D000937 ORTHO05D000787 3.5e-08 61.2 64 45.3
Lj7A163G46 Lonicera japonica HOM05D000937 ORTHO05D000787 3.5e-08 61.2 72 40.3
Rhsim11G0087900 Rhododendron simsii HOM05D000937 ORTHO05D000787 3.5e-08 61.2 71 42.3
PGR044G0667 Punica granatum HOM05D000937 ORTHO05D000787 4.5e-08 60.8 62 43.5
GSVIVG01001413001 Vitis vinifera HOM05D000937 ORTHO05D000787 4.5e-08 60.8 74 41.9
GSVIVG01001419001 Vitis vinifera HOM05D000937 ORTHO05D000787 4.5e-08 60.8 64 45.3
Cc10_g15290 Coffea canephora HOM05D000937 ORTHO05D000787 5.9e-08 60.5 64 45.3
Hma1.2p1_0678F.1_g202030 Hydrangea macrophylla HOM05D000937 ORTHO05D000787 5.9e-08 60.5 64 45.3
GSVIVG01001412001 Vitis vinifera HOM05D000937 ORTHO05D000787 5.9e-08 60.5 64 45.3
CARHR033530 Cardamine hirsuta HOM05D000937 ORTHO05D000787 7.7e-08 60.1 69 47.8
PSO386G0044 Papaver somniferum HOM05D000937 ORTHO05D000787 7.7e-08 60.1 65 46.2
MD10G1035700 Malus domestica HOM05D000937 ORTHO05D000787 1.0e-07 59.7 62 48.4
Sc15g0003850 Simmondsia chinensis HOM05D000937 ORTHO05D000787 1.0e-07 59.7 61 44.3
HanXRQChr13g0391691 Helianthus annuus HOM05D000937 ORTHO05D000787 1.3e-07 59.3 54 48.1
GSVIVG01001418001 Vitis vinifera HOM05D000937 ORTHO05D000787 1.3e-07 59.3 64 42.2
Gohir.A07G034700 Gossypium hirsutum HOM05D000937 ORTHO05D000787 1.7e-07 58.9 64 42.2
AUR62026634 Chenopodium quinoa HOM05D000937 ORTHO05D000787 2.9e-07 58.2 61 45.9
Zm00001eb154800 Zea mays HOM05D000937 ORTHO05D000787 2.9e-07 58.2 64 45.3
CARHR033450 Cardamine hirsuta HOM05D000937 ORTHO05D000787 3.8e-07 57.8 38 63.2
Gohir.D07G038133 Gossypium hirsutum HOM05D000937 ORTHO05D000787 3.8e-07 57.8 64 42.2
Gorai.001G040000 Gossypium raimondii HOM05D000937 ORTHO05D000787 3.8e-07 57.8 64 42.2
Prupe.8G041200 Prunus persica HOM05D000937 ORTHO05D000787 3.8e-07 57.8 64 46.9
CSS0000666 Camellia sinensis var. sinensis HOM05D000937 ORTHO05D000787 5.0e-07 57.4 72 37.5
Haze_18640 Corylus avellana HOM05D000937 ORTHO05D000787 6.6e-07 57.0 68 41.2
Solyc02g062190.2 Solanum lycopersicum HOM05D000937 ORTHO05D000787 6.6e-07 57.0 63 41.3
PGSC0003DMG400023890 Solanum tuberosum HOM05D000937 ORTHO05D000787 6.6e-07 57.0 63 41.3
CSS0036646 Camellia sinensis var. sinensis HOM05D000937 ORTHO05D000787 8.6e-07 56.6 72 37.5
Cc10_g15340 Coffea canephora HOM05D000937 ORTHO05D000787 8.6e-07 56.6 69 37.7
COL.COLO4_00137 Corchorus olitorius HOM05D000937 ORTHO05D000787 8.6e-07 56.6 64 35.9
Haze_21327 Corylus avellana HOM05D000937 ORTHO05D000787 8.6e-07 56.6 61 44.3
Zm00001eb154790 Zea mays HOM05D000937 ORTHO05D000787 8.6e-07 56.6 64 43.8
AL1G48480 Arabidopsis lyrata HOM05D000937 ORTHO05D000787 1.1e-06 56.2 58 50.0
MSTRG.24933 Avicennia marina HOM05D000937 ORTHO05D000787 1.1e-06 56.2 64 43.8
CANSAT25G3443 Cannabis sativa HOM05D000937 ORTHO05D000787 1.1e-06 56.2 65 43.1
AUR62034890 Chenopodium quinoa HOM05D000937 ORTHO05D000787 1.1e-06 56.2 55 45.5
vmacro01495 Vaccinium macrocarpon HOM05D000937 ORTHO05D000787 1.5e-06 55.8 65 40.0
Glyma.16G165300 Glycine max HOM05D000937 ORTHO05D000787 1.9e-06 55.5 64 42.2
Manes.18G095250 Manihot esculenta HOM05D000937 ORTHO05D000787 1.9e-06 55.5 65 40.0
Manes.18G102100 Manihot esculenta HOM05D000937 ORTHO05D000787 1.9e-06 55.5 65 40.0
Sopen02g013170 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-06 55.5 60 41.7
Thecc.08G160100 Theobroma cacao HOM05D000937 ORTHO05D000787 2.5e-06 55.1 64 37.5
Os01g0717700 Oryza sativa ssp. japonica HOM05D000937 ORTHO05D000787 3.3e-06 54.7 64 43.8
SEGI_41148 Sequoiadendron giganteum HOM05D000937 ORTHO05D000787 3.3e-06 54.7 61 44.3
BcaB07g33027 Brassica carinata HOM05D000937 ORTHO05D000787 5.5e-06 53.9 36 63.9
HanXRQChr11g0338591 Helianthus annuus HOM05D000937 ORTHO05D000787 7.2e-06 53.5 64 39.1


User provided reference genes

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