Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006819g0030 Nicotiana tabacum HOM05D004649 ORTHO05D005446 7.1e-240 833.6 432 100.0
Nitab4.5_0000559g0250 Nicotiana tabacum HOM05D004649 ORTHO05D005446 3.8e-225 784.6 432 93.5
Nitab4.5_0001031g0020 Nicotiana tabacum HOM05D004649 ORTHO05D005446 7.4e-197 690.6 429 81.6
PGSC0003DMG400020222 Solanum tuberosum HOM05D004649 ORTHO05D005446 2.6e-194 682.2 432 80.3
Sopen02g038570 Solanum pennellii HOM05D004649 ORTHO05D005446 1.0e-193 680.2 432 80.6
Solyc02g093920.2 Solanum lycopersicum HOM05D004649 ORTHO05D005446 1.7e-193 679.5 432 80.3
Dinv25679 Davidia involucrata HOM05D004649 ORTHO05D005446 5.0e-193 677.9 430 80.2
Dinv33366 Davidia involucrata HOM05D004649 ORTHO05D005446 1.9e-192 676.0 432 79.6
CSS0030171 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 1.4e-190 669.8 432 78.7
CSS0047966 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 3.9e-190 668.3 432 78.7
CAN.G1965.13 Capsicum annuum HOM05D004649 ORTHO05D005446 9.7e-189 663.7 431 79.1
GSVIVG01001824001 Vitis vinifera HOM05D004649 ORTHO05D005446 9.1e-187 657.1 432 76.9
CAN.G473.77 Capsicum annuum HOM05D004649 ORTHO05D005446 1.2e-186 656.8 432 77.5
TAR371G0838 Trochodendron aralioides HOM05D004649 ORTHO05D005446 4.5e-186 654.8 432 76.9
TWI36G0899 Tripterygium wilfordii HOM05D004649 ORTHO05D005446 1.3e-185 653.3 432 76.6
MSTRG.15559 Avicennia marina HOM05D004649 ORTHO05D005446 1.4e-182 643.3 432 75.2
Peaxi162Scf00420g00411 Petunia axillaris HOM05D004649 ORTHO05D005446 6.7e-182 641.0 433 77.4
Peaxi162Scf00700g00129 Petunia axillaris HOM05D004649 ORTHO05D005446 4.4e-181 638.3 430 78.4
Actinidia05924 Actinidia chinensis HOM05D004649 ORTHO05D005446 1.7e-180 636.3 433 74.4
CANSAT64G0679 Cannabis sativa HOM05D004649 ORTHO05D005446 1.8e-179 632.9 432 74.1
Potri.001G334200 Populus trichocarpa HOM05D004649 ORTHO05D005446 4.1e-179 631.7 432 73.8
Thecc.04G029900 Theobroma cacao HOM05D004649 ORTHO05D005446 5.3e-179 631.3 429 73.9
Gorai.012G088900 Gossypium raimondii HOM05D004649 ORTHO05D005446 7.0e-179 630.9 432 74.3
Cc07_g00570 Coffea canephora HOM05D004649 ORTHO05D005446 9.1e-179 630.6 435 75.6
Rhsim10G0008900 Rhododendron simsii HOM05D004649 ORTHO05D005446 9.1e-179 630.6 433 75.1
vmacro05936 Vaccinium macrocarpon HOM05D004649 ORTHO05D005446 2.0e-178 629.4 430 74.7
Ciclev10015345m.g Citrus clementina HOM05D004649 ORTHO05D005446 7.7e-178 627.5 432 73.8
Gohir.D04G079000 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.3e-177 626.7 432 73.8
Gohir.A05G340700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.7e-177 626.3 432 73.6
Gorai.006G040000 Gossypium raimondii HOM05D004649 ORTHO05D005446 8.5e-177 624.0 432 72.7
Glyma.05G075400 Glycine max HOM05D004649 ORTHO05D005446 1.9e-176 622.9 432 72.9
QL02p072453 Quercus lobata HOM05D004649 ORTHO05D005446 2.5e-176 622.5 431 74.2
Migut.K01446 Erythranthe guttata HOM05D004649 ORTHO05D005446 5.5e-176 621.3 432 73.8
Gohir.A09G034200 Gossypium hirsutum HOM05D004649 ORTHO05D005446 5.5e-176 621.3 432 72.5
Duzib264G0046 Durio zibethinus HOM05D004649 ORTHO05D005446 9.4e-176 620.5 432 72.7
Nitab4.5_0002887g0140 Nicotiana tabacum HOM05D004649 ORTHO05D005446 9.4e-176 620.5 432 75.9
Atru.chr6.2512 Acer truncatum HOM05D004649 ORTHO05D005446 3.6e-175 618.6 432 72.0
Manes.17G106100 Manihot esculenta HOM05D004649 ORTHO05D005446 3.6e-175 618.6 432 72.7
CiPaw.04G034500 Carya illinoinensis HOM05D004649 ORTHO05D005446 4.7e-175 618.2 428 73.8
Lsat_1_v5_gn_2_93941 Lactuca sativa HOM05D004649 ORTHO05D005446 1.4e-174 616.7 431 71.7
AUR62033709 Chenopodium quinoa HOM05D004649 ORTHO05D005446 5.2e-174 614.8 432 72.2
AUR62036815 Chenopodium quinoa HOM05D004649 ORTHO05D005446 6.8e-174 614.4 432 72.5
Glyma.19G075700 Glycine max HOM05D004649 ORTHO05D005446 8.8e-174 614.0 432 72.2
VMungo1080G0439 Vigna mungo HOM05D004649 ORTHO05D005446 1.2e-173 613.6 432 72.0
Prupe.3G302400 Prunus persica HOM05D004649 ORTHO05D005446 2.0e-173 612.8 432 71.8
MELO3C008213.2 Cucumis melo HOM05D004649 ORTHO05D005446 3.4e-173 612.1 432 73.4
Phvul.004G055700 Phaseolus vulgaris HOM05D004649 ORTHO05D005446 4.4e-173 611.7 432 71.5
HanXRQChr14g0450901 Helianthus annuus HOM05D004649 ORTHO05D005446 5.7e-173 611.3 432 70.4
RcHm_v2.0_Chr2g0174731 Rosa chinensis HOM05D004649 ORTHO05D005446 3.7e-172 608.6 429 71.6
CsaV3_6G001150 Cucumis sativus L. HOM05D004649 ORTHO05D005446 1.1e-171 607.1 432 72.9
SGA_v2.0_scaffold154G37160 Striga asiatica HOM05D004649 ORTHO05D005446 1.1e-171 607.1 430 72.3
Lalb_Chr02g0157841 Lupinus albus HOM05D004649 ORTHO05D005446 1.6e-170 603.2 434 71.9
Ca_04417_v3 Cicer arietinum L. HOM05D004649 ORTHO05D005446 2.7e-170 602.4 433 71.1
Gohir.D09G035100 Gossypium hirsutum HOM05D004649 ORTHO05D005446 3.5e-170 602.1 432 71.1
FAN09G0187 Fragaria x ananassa HOM05D004649 ORTHO05D005446 4.5e-170 601.7 429 70.6
PGR142G2348 Punica granatum HOM05D004649 ORTHO05D005446 7.7e-170 600.9 430 70.2
Duzib147G0539 Durio zibethinus HOM05D004649 ORTHO05D005446 1.3e-169 600.1 432 71.8
DCAR_011306 Daucus carota HOM05D004649 ORTHO05D005446 3.8e-169 598.6 433 70.0
FvH4_6g52990 Fragaria vesca HOM05D004649 ORTHO05D005446 3.8e-169 598.6 429 70.4
MD17G1015500 Malus domestica HOM05D004649 ORTHO05D005446 3.8e-169 598.6 432 69.9
arahy.Tifrunner.gnm1.ann1.2RTQ1W Arachis hypogaea HOM05D004649 ORTHO05D005446 6.6e-169 597.8 434 71.7
ECA238G0199 Erigeron canadensis HOM05D004649 ORTHO05D005446 3.3e-168 595.5 432 69.7
FAN02G2492 Fragaria x ananassa HOM05D004649 ORTHO05D005446 4.2e-168 595.1 429 69.9
HanXRQChr07g0198311 Helianthus annuus HOM05D004649 ORTHO05D005446 1.2e-167 593.6 432 69.7
Cpa.g.sc130.9 Carica papaya HOM05D004649 ORTHO05D005446 2.8e-167 592.4 433 70.7
MD09G1015400 Malus domestica HOM05D004649 ORTHO05D005446 8.0e-167 590.9 432 69.0
CiPaw.03G052200 Carya illinoinensis HOM05D004649 ORTHO05D005446 2.3e-166 589.3 432 70.4
arahy.Tifrunner.gnm1.ann1.B3K3FC Arachis hypogaea HOM05D004649 ORTHO05D005446 4.4e-165 585.1 441 69.8
TPR.G7524 Trifolium pratense HOM05D004649 ORTHO05D005446 9.8e-165 583.9 434 69.4
ClCG11G006900 Citrullus lanatus HOM05D004649 ORTHO05D005446 8.3e-164 580.9 466 66.7
Medtr6g023350 Medicago truncatula HOM05D004649 ORTHO05D005446 5.4e-163 578.2 434 68.9
COL.COLO4_08766 Corchorus olitorius HOM05D004649 ORTHO05D005446 2.7e-162 575.9 429 70.2
Haze_14832 Corylus avellana HOM05D004649 ORTHO05D005446 7.8e-162 574.3 458 67.2
FAN05G5354 Fragaria x ananassa HOM05D004649 ORTHO05D005446 2.9e-161 572.4 471 64.1
Eucgr.I01664 Eucalyptus grandis HOM05D004649 ORTHO05D005446 8.6e-161 570.9 410 69.5
Sed0002339 Sechium edule HOM05D004649 ORTHO05D005446 7.3e-160 567.8 432 67.4
Hund06757 Selenicereus undatus HOM05D004649 ORTHO05D005446 4.7e-159 565.1 432 68.3
HPP92_017768 Vanilla planifolia HOM05D004649 ORTHO05D005446 6.1e-159 564.7 429 65.5
Aqoxy5G03494 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 2.3e-158 562.8 436 65.8
Lj7C608T4 Lonicera japonica HOM05D004649 ORTHO05D005446 2.3e-158 562.8 432 68.5
Lj1g0022023 Lotus japonicus HOM05D004649 ORTHO05D005446 2.6e-157 559.3 434 67.3
THA.LOC104821114 Tarenaya hassleriana HOM05D004649 ORTHO05D005446 3.4e-157 558.9 430 66.7
CDE09G0552 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 2.2e-156 556.2 429 64.8
Psat1g084880 Pisum sativum HOM05D004649 ORTHO05D005446 6.4e-156 554.7 434 66.6
PSO782G5348 Papaver somniferum HOM05D004649 ORTHO05D005446 8.3e-156 554.3 433 67.0
Nn2g10549 Nelumbo nucifera HOM05D004649 ORTHO05D005446 2.3e-153 546.2 432 65.0
C02p06640 Brassica napus HOM05D004649 ORTHO05D005446 3.3e-152 542.3 434 64.1
Sc07g0004210 Simmondsia chinensis HOM05D004649 ORTHO05D005446 1.2e-151 540.4 385 72.7
Gohir.D10G084700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 2.8e-151 539.3 432 64.8
BcaC03g13505 Brassica carinata HOM05D004649 ORTHO05D005446 1.1e-150 537.3 434 63.6
BolC2t06607H Brassica oleracea HOM05D005656 ORTHO05D005446 1.4e-150 537.0 433 63.5
BraA02t05210Z Brassica rapa HOM05D004649 ORTHO05D005446 1.4e-150 537.0 433 63.7
A02p02400 Brassica napus HOM05D005656 ORTHO05D007094 1.8e-150 536.6 432 63.7
Sp6g29780 Schrenkiella parvula HOM05D004649 ORTHO05D005446 8.9e-150 534.3 433 63.7
Aa31LG11G15040 Aethionema arabicum HOM05D004649 ORTHO05D005446 1.2e-149 533.9 433 64.2
Thhalv10013615m.g Eutrema salsugineum HOM05D004649 ORTHO05D005446 1.2e-149 533.9 433 64.4
BcaNung03172 Brassica carinata HOM05D004649 ORTHO05D005446 1.7e-148 530.0 430 63.0
unitig_52.g17652 Utricularia gibba HOM05D004649 ORTHO05D005446 4.1e-147 525.4 444 63.5
Os08g0119000 Oryza sativa ssp. japonica HOM05D004649 ORTHO05D005446 1.2e-146 523.9 433 63.0
DCAR_015086 Daucus carota HOM05D004649 ORTHO05D005446 2.1e-146 523.1 429 61.1
Potri.017G066300 Populus trichocarpa HOM05D004649 ORTHO05D005446 7.8e-146 521.2 331 79.5
Gorai.011G092400 Gossypium raimondii HOM05D004649 ORTHO05D005446 1.7e-145 520.0 432 64.6
C09p62910 Brassica napus HOM05D005656 ORTHO05D007094 8.6e-145 517.7 432 62.0
BolC9t59128H Brassica oleracea HOM05D005656 ORTHO05D007094 8.6e-145 517.7 432 62.0
BcaB08g36970 Brassica carinata HOM05D004649 ORTHO05D005446 1.9e-144 516.5 433 62.6
Zm00001eb261210 Zea mays HOM05D004649 ORTHO05D005446 1.9e-144 516.5 432 62.0
Manes.15G158000 Manihot esculenta HOM05D004649 ORTHO05D005446 9.5e-144 514.2 320 80.6
BraA10t44487Z Brassica rapa HOM05D005656 ORTHO05D007094 4.7e-143 511.9 432 61.1
BcaC04g19049 Brassica carinata HOM05D005656 ORTHO05D007094 1.8e-142 510.0 432 61.1
Carub.0006s1245 Capsella rubella HOM05D004649 ORTHO05D005446 1.8e-142 510.0 433 61.2
A03p06510 Brassica napus HOM05D004649 ORTHO05D005446 3.1e-142 509.2 433 61.4
BraA03t09983Z Brassica rapa HOM05D004649 ORTHO05D005446 2.0e-141 506.5 433 61.0
AT5G14250 Arabidopsis thaliana HOM05D004649 ORTHO05D005446 3.4e-141 505.8 433 61.7
A10p24220 Brassica napus HOM05D005656 ORTHO05D007094 3.4e-141 505.8 432 60.9
Sed0000018 Sechium edule HOM05D004649 ORTHO05D005446 2.9e-140 502.7 432 61.3
BcaB01g06336 Brassica carinata HOM05D004649 ORTHO05D005446 3.2e-139 499.2 433 59.6
ATR0124G048 Amborella trichopoda HOM05D004649 ORTHO05D005446 3.9e-137 492.3 363 68.0
Aqoxy3G01472 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 1.1e-136 490.7 433 60.0
AL6G24930 Arabidopsis lyrata HOM05D004649 ORTHO05D005446 1.5e-136 490.3 390 65.4
CDE02G4363 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 2.0e-133 479.9 451 57.9
CARHR199090 Cardamine hirsuta HOM05D004649 ORTHO05D005446 7.6e-133 478.0 394 63.7
Pp3c11_20060 Physcomitrium patens HOM05D004649 ORTHO05D005446 5.3e-126 455.3 434 53.7
Mapoly0005s0216 Marchantia polymorpha HOM05D004649 ORTHO05D005446 4.9e-124 448.7 434 53.5
EL10As11g23981 Beta vulgaris HOM05D004649 ORTHO05D005446 3.5e-122 442.6 393 62.3
AagrBONN_evm.TU.Sc2ySwM_368.1057 Anthoceros agrestis HOM05D004649 ORTHO05D005446 1.9e-120 436.8 458 51.7
SMO351G0195 Selaginella moellendorffii HOM05D004649 ORTHO05D005446 1.6e-119 433.7 431 52.7
PSO017G3153 Papaver somniferum HOM05D004649 ORTHO05D005446 2.2e-116 423.3 407 59.0
Sabra16G0215300 Salix brachista HOM05D004649 ORTHO05D005446 1.2e-109 401.0 241 83.8
CBR_g75710 Chara braunii HOM05D004649 ORTHO05D005446 5.5e-107 392.1 437 48.7
Hma1.2p1_0571F.1_g180750 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 1.2e-106 391.0 239 82.0
Actinidia36180 Actinidia chinensis HOM05D004649 ORTHO05D005446 1.5e-101 374.0 435 51.5
Nn3g16527 Nelumbo nucifera HOM05D004649 ORTHO05D005446 1.5e-101 374.0 291 63.9
Zm00001eb173540 Zea mays HOM05D004649 ORTHO05D005446 2.7e-98 363.2 343 58.0
BcaB01g05123 Brassica carinata HOM05D004649 ORTHO05D005446 8.7e-97 358.2 362 54.7
C03p07530 Brassica napus HOM05D004649 ORTHO05D005446 2.4e-94 350.1 365 54.0
Cre16.g671100 Chlamydomonas reinhardtii HOM05D004649 ORTHO05D005446 9.1e-70 268.5 437 37.3
Gohir.A01G185660 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.2e-66 258.1 221 63.8
CAN.G473.64 Capsicum annuum HOM05D004649 ORTHO05D005446 2.0e-64 250.8 192 71.4
C09p61600 Brassica napus HOM05D004649 ORTHO05D005446 2.8e-63 246.9 332 44.9
PRCOL_00002547 Prasinoderma coloniale HOM05D004649 ORTHO05D005446 5.2e-57 226.1 358 37.7
BcaC04g18970 Brassica carinata HOM05D004649 ORTHO05D005446 1.3e-55 221.5 382 40.6
A03p07400 Brassica napus HOM05D004649 ORTHO05D005446 1.1e-54 218.4 194 59.8
BraA03t10063Z Brassica rapa HOM05D004649 ORTHO05D005446 3.4e-48 196.8 194 54.6
BolC9t59028H Brassica oleracea HOM05D004649 ORTHO05D005446 6.3e-47 192.6 312 41.0
SEGI_26946 Sequoiadendron giganteum HOM05D004649 ORTHO05D005446 1.0e-44 185.3 150 61.3
Sabra07G0059200 Salix brachista HOM05D004649 ORTHO05D005446 5.6e-43 179.5 257 44.0
MCO12G022 Micromonas commoda HOM05D004649 ORTHO05D005446 3.2e-30 137.1 320 30.9
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 1.6e-29 134.8 156 50.0
BolC3t13254H Brassica oleracea HOM05D004649 ORTHO05D005446 3.5e-29 133.7 105 64.8
Duzib268G1750 Durio zibethinus HOM05D004649 ORTHO05D005446 8.1e-26 122.5 124 48.4
FAN09G3197 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.1e-25 122.1 119 49.6
BcaB08g36975 Brassica carinata HOM05D005656 ORTHO05D007094 3.2e-22 110.5 78 65.4
QL12p000006 Quercus lobata HOM05D004649 ORTHO05D005446 1.6e-21 108.2 85 65.9
QL12p000135 Quercus lobata HOM05D004649 ORTHO05D005446 1.6e-21 108.2 85 65.9
Hma1.2p1_0571F.1_g180740 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 1.2e-16 92.0 62 75.8
Oeu042415.1 Olea europaea HOM05D004649 ORTHO05D005446 2.7e-13 80.9 48 81.2
FvH4_2g01181 Fragaria vesca HOM05D000564 ORTHO05D005446 2.1e-10 71.2 53 71.7
Aqoxy5G03476 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 5.3e-09 66.6 120 40.8
ECA232G4246 Erigeron canadensis HOM05D004649 ORTHO05D005446 3.4e-08 63.9 75 50.7
EL10As11g23980 Beta vulgaris HOM05D004649 ORTHO05D005446 4.4e-08 63.5 37 75.7
Dinv09944 Davidia involucrata HOM05D002612 ORTHO05D002859 1.3e-07 62.0 48 68.8
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 3.8e-07 60.5 64 50.0
CARHR069530 Cardamine hirsuta HOM05D002716 ORTHO05D003324 6.4e-07 59.7 212 29.2
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 1.1e-06 58.9 48 60.4
AT1G75990 Arabidopsis thaliana HOM05D002716 ORTHO05D003324 1.4e-06 58.5 212 28.8
Carub.0001s1973 Capsella rubella HOM05D002716 ORTHO05D003324 1.4e-06 58.5 209 26.8
AT1G20200 Arabidopsis thaliana HOM05D002716 ORTHO05D003324 1.9e-06 58.2 209 26.8
AL1G33040 Arabidopsis lyrata HOM05D002716 ORTHO05D003324 2.4e-06 57.8 209 26.8
Thhalv10007479m.g Eutrema salsugineum HOM05D002716 ORTHO05D003324 2.4e-06 57.8 209 26.8
AL2G36010 Arabidopsis lyrata HOM05D002716 ORTHO05D003324 3.2e-06 57.4 209 26.8
Sp1g17970 Schrenkiella parvula HOM05D002716 ORTHO05D003324 4.2e-06 57.0 209 26.8
CARHR020700 Cardamine hirsuta HOM05D002716 ORTHO05D003324 5.4e-06 56.6 209 26.8
BcaB03g12876 Brassica carinata HOM05D002716 ORTHO05D003324 7.1e-06 56.2 209 26.8
Carub.0002s2288 Capsella rubella HOM05D002716 ORTHO05D003324 7.1e-06 56.2 212 28.8
A07p41500 Brassica napus HOM05D002716 ORTHO05D003324 9.3e-06 55.8 212 29.2
BraA07t31682Z Brassica rapa HOM05D002716 ORTHO05D003324 9.3e-06 55.8 212 29.2


User provided reference genes

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