Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006764g0020 Nicotiana tabacum HOM05D012161 ORTHO05D002431 2.7e-145 518.8 299 100.0
Nitab4.5_0009266g0010 Nicotiana tabacum HOM05D012161 ORTHO05D002431 1.1e-117 427.2 304 74.3
Sopen11g024730 Solanum pennellii HOM05D012161 ORTHO05D002431 1.0e-83 314.3 342 52.9
Solyc11g064930.3 Solanum lycopersicum HOM05D012161 ORTHO05D002431 3.4e-55 219.5 279 48.4
CAN.G468.5 Capsicum annuum HOM05D012161 ORTHO05D002431 1.2e-49 201.1 202 55.0
Peaxi162Scf00004g00434 Petunia axillaris HOM05D012161 ORTHO05D002431 1.3e-38 164.5 283 52.7
Oeu032569.1 Olea europaea HOM05D002917 ORTHO05D002431 6.0e-12 75.9 69 55.1
PGR119G1093 Punica granatum HOM05D002917 ORTHO05D002431 7.8e-12 75.5 70 54.3
Peaxi162Scf00272g00824 Petunia axillaris HOM05D023424 ORTHO05D002431 1.3e-11 74.7 187 34.2
Potri.009G067600 Populus trichocarpa HOM05D002917 ORTHO05D002431 5.1e-11 72.8 71 52.1
Sp6g24940 Schrenkiella parvula HOM05D002917 ORTHO05D002431 2.5e-10 70.5 56 60.7
CiPaw.13G149300 Carya illinoinensis HOM05D002917 ORTHO05D002431 3.3e-10 70.1 65 53.8
Eucgr.J00684 Eucalyptus grandis HOM05D002917 ORTHO05D002431 3.3e-10 70.1 73 47.9
Rhsim13G0207800 Rhododendron simsii HOM05D002917 ORTHO05D002431 4.3e-10 69.7 69 46.4
Potri.001G273300 Populus trichocarpa HOM05D002917 ORTHO05D002431 7.3e-10 68.9 67 52.2
CSS0017424 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 9.6e-10 68.6 61 54.1
CSS0039673 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 9.6e-10 68.6 61 54.1
Dinv15024 Davidia involucrata HOM05D002917 ORTHO05D002431 9.6e-10 68.6 71 47.9
MBI19_g20793_MAGBIO Magnolia biondii HOM05D002917 ORTHO05D002431 9.6e-10 68.6 56 55.4
Nn7g36760 Nelumbo nucifera HOM05D002917 ORTHO05D002431 9.6e-10 68.6 75 48.0
AL6G30970 Arabidopsis lyrata HOM05D002917 ORTHO05D002431 1.3e-09 68.2 64 53.1
Sabra09G0050600 Salix brachista HOM05D002917 ORTHO05D002431 1.3e-09 68.2 59 55.9
Haze_23253 Corylus avellana HOM05D002917 ORTHO05D002431 1.6e-09 67.8 58 56.9
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 2.1e-09 67.4 57 57.9
Manes.02G136400 Manihot esculenta HOM05D002917 ORTHO05D002431 2.1e-09 67.4 60 51.7
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 2.8e-09 67.0 52 61.5
C09p56830 Brassica napus HOM05D002917 ORTHO05D002431 2.8e-09 67.0 52 61.5
BolC9t58537H Brassica oleracea HOM05D002917 ORTHO05D002431 2.8e-09 67.0 52 61.5
Carub.0006s1781 Capsella rubella HOM05D002917 ORTHO05D002431 2.8e-09 67.0 64 51.6
Thhalv10015114m.g Eutrema salsugineum HOM05D002917 ORTHO05D002431 2.8e-09 67.0 52 61.5
CSS0010926 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 3.6e-09 66.6 62 53.2
Ciclev10018107m.g Citrus clementina HOM05D002917 ORTHO05D002431 3.6e-09 66.6 67 50.7
GSVIVG01037326001 Vitis vinifera HOM05D002917 ORTHO05D002431 4.8e-09 66.2 66 50.0
AT5G19473 Arabidopsis thaliana HOM05D002917 ORTHO05D002431 1.1e-08 65.1 63 50.8
Gohir.D08G020400 Gossypium hirsutum HOM05D009394 ORTHO05D002431 1.1e-08 65.1 269 30.1
Gohir.A09G110600 Gossypium hirsutum HOM05D009394 ORTHO05D002431 1.4e-08 64.7 51 58.8
Gohir.D09G107100 Gossypium hirsutum HOM05D009394 ORTHO05D002431 1.4e-08 64.7 51 58.8
Gorai.006G124700 Gossypium raimondii HOM05D009394 ORTHO05D002431 1.4e-08 64.7 51 58.8
QL01p016834 Quercus lobata HOM05D012161 ORTHO05D002431 1.4e-08 64.7 44 70.5
Psat2g020800 Pisum sativum HOM05D009394 ORTHO05D002431 2.4e-08 63.9 169 33.7
Gohir.A08G010300 Gossypium hirsutum HOM05D009394 ORTHO05D002431 3.1e-08 63.5 269 29.0
CARHR193450 Cardamine hirsuta HOM05D002917 ORTHO05D002431 4.0e-08 63.2 52 57.7
THA.LOC104799140 Tarenaya hassleriana HOM05D012161 ORTHO05D002431 4.0e-08 63.2 50 56.0
Sopen12g034410 Solanum pennellii HOM05D023424 ORTHO05D002431 5.3e-08 62.8 79 48.1
Thecc.09G247400 Theobroma cacao HOM05D002917 ORTHO05D002431 5.3e-08 62.8 71 47.9
COL.COLO4_24485 Corchorus olitorius HOM05D009394 ORTHO05D002431 9.0e-08 62.0 53 60.4
MD03G1164700 Malus domestica HOM05D012161 ORTHO05D002431 9.0e-08 62.0 65 53.8
Prupe.4G264200 Prunus persica HOM05D002917 ORTHO05D002431 9.0e-08 62.0 63 50.8
Duzib170G0372 Durio zibethinus HOM05D006044 ORTHO05D007653 1.2e-07 61.6 70 47.1
Lalb_Chr04g0249281 Lupinus albus HOM05D009394 ORTHO05D002431 1.2e-07 61.6 37 73.0
SGA_v2.0_scaffold310G48220 Striga asiatica HOM05D014772 ORTHO05D019381 1.2e-07 61.6 60 56.7
Aqoxy1G00393 Aquilegia oxysepala HOM05D002917 ORTHO05D002431 1.5e-07 61.2 73 42.5
Phvul.006G204500 Phaseolus vulgaris HOM05D009394 ORTHO05D002431 2.0e-07 60.8 38 63.2
Gorai.004G015000 Gossypium raimondii HOM05D009394 ORTHO05D002431 2.6e-07 60.5 155 29.7
Solyc12g099780.2 Solanum lycopersicum HOM05D023424 ORTHO05D002431 2.6e-07 60.5 91 44.0
TPR.G16410 Trifolium pratense HOM05D009394 ORTHO05D002431 2.6e-07 60.5 38 68.4
BcaB01g04859 Brassica carinata HOM05D002917 ORTHO05D002431 3.4e-07 60.1 55 54.5
BcaB01g05147 Brassica carinata HOM05D002917 ORTHO05D002431 3.4e-07 60.1 55 54.5
A03p09490 Brassica napus HOM05D002917 ORTHO05D002431 3.4e-07 60.1 55 54.5
C03p11070 Brassica napus HOM05D002917 ORTHO05D002431 3.4e-07 60.1 55 54.5
BolC3t13577H Brassica oleracea HOM05D002917 ORTHO05D002431 3.4e-07 60.1 55 54.5
BraA03t10267Z Brassica rapa HOM05D002917 ORTHO05D002431 3.4e-07 60.1 55 54.5
CsaV3_6G038900 Cucumis sativus L. HOM05D009394 ORTHO05D002431 3.4e-07 60.1 55 52.7
Glyma.15G055400 Glycine max HOM05D009394 ORTHO05D002431 3.4e-07 60.1 51 56.9
Medtr5g089290 Medicago truncatula HOM05D009394 ORTHO05D002431 4.4e-07 59.7 60 50.0
Sc09g0001070 Simmondsia chinensis HOM05D009394 ORTHO05D002431 4.4e-07 59.7 67 46.3
TPR.G24378 Trifolium pratense HOM05D012161 ORTHO05D002431 5.8e-07 59.3 171 38.0
arahy.Tifrunner.gnm1.ann1.NQ28YP Arachis hypogaea HOM05D009394 ORTHO05D002431 7.6e-07 58.9 37 70.3
arahy.Tifrunner.gnm1.ann1.S8RCCH Arachis hypogaea HOM05D009394 ORTHO05D002431 7.6e-07 58.9 37 70.3
LjContig00564g0021896 Lotus japonicus HOM05D009394 ORTHO05D002431 7.6e-07 58.9 66 47.0
CANSAT54G1823 Cannabis sativa HOM05D002917 ORTHO05D002431 9.9e-07 58.5 58 51.7
Lalb_Chr10g0106201 Lupinus albus HOM05D009394 ORTHO05D002431 1.3e-06 58.2 60 53.3
PGSC0003DMG400004715 Solanum tuberosum HOM05D023424 ORTHO05D002431 1.3e-06 58.2 91 42.9
FAN21G0185 Fragaria x ananassa HOM05D002917 ORTHO05D002431 2.2e-06 57.4 64 48.4
Cpa.g.sc34.178 Carica papaya HOM05D009394 ORTHO05D002431 2.9e-06 57.0 61 50.8
Atru.chr3.2999 Acer truncatum HOM05D002917 ORTHO05D002431 3.8e-06 56.6 53 49.1
RcHm_v2.0_Chr5g0050361 Rosa chinensis HOM05D012161 ORTHO05D002431 6.4e-06 55.8 64 50.0
Sabra16G0168400 Salix brachista HOM05D002917 ORTHO05D002431 8.4e-06 55.5 66 40.9


User provided reference genes

Program Settings