Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006762g0020 Nicotiana tabacum HOM05D005648 ORTHO05D007357 8.8e-221 770.0 394 100.0
Nitab4.5_0000583g0110 Nicotiana tabacum HOM05D005648 ORTHO05D007357 9.0e-133 477.6 301 84.4
Sopen01g038460 Solanum pennellii HOM05D005648 ORTHO05D007357 1.8e-128 463.4 459 61.2
Solyc01g094650.4 Solanum lycopersicum HOM05D005648 ORTHO05D007357 3.0e-128 462.6 459 61.4
CAN.G78.81 Capsicum annuum HOM05D005648 ORTHO05D007357 4.5e-124 448.7 414 63.0
Peaxi162Scf00020g00424 Petunia axillaris HOM05D005648 ORTHO05D007357 4.2e-114 415.6 466 56.2
Peaxi162Scf00020g00041 Petunia axillaris HOM05D005648 ORTHO05D007357 1.2e-95 354.4 336 63.1
Oeu010615.1 Olea europaea HOM05D005648 ORTHO05D007357 2.1e-81 307.0 423 46.1
QL08p048767 Quercus lobata HOM05D005648 ORTHO05D007357 5.9e-76 288.9 419 45.8
Migut.B01757 Erythranthe guttata HOM05D005648 ORTHO05D007357 4.3e-74 282.7 418 42.3
Prupe.2G170800 Prunus persica HOM05D005648 ORTHO05D007357 4.0e-72 276.2 421 43.0
Haze_07444 Corylus avellana HOM05D005648 ORTHO05D007357 9.8e-71 271.6 389 43.7
Manes.01G256501 Manihot esculenta HOM05D005648 ORTHO05D007357 1.2e-68 264.6 424 41.7
Sabra14G0061500 Salix brachista HOM05D005648 ORTHO05D007357 2.0e-68 263.8 435 41.8
MSTRG.20835 Avicennia marina HOM05D005648 ORTHO05D007357 3.5e-68 263.1 420 42.1
Potri.002G160100 Populus trichocarpa HOM05D005648 ORTHO05D007357 3.5e-68 263.1 419 41.3
Gorai.004G158700 Gossypium raimondii HOM05D005648 ORTHO05D007357 4.6e-68 262.7 416 39.7
Thecc.01G358800 Theobroma cacao HOM05D005648 ORTHO05D007357 1.0e-67 261.5 411 40.1
Manes.05G034000 Manihot esculenta HOM05D005648 ORTHO05D007357 1.7e-67 260.8 412 42.2
FvH4_7g14300 Fragaria vesca HOM05D005648 ORTHO05D007357 2.5e-66 256.9 464 39.0
Gohir.A08G131300 Gossypium hirsutum HOM05D005648 ORTHO05D007357 3.3e-66 256.5 416 38.9
PGR031G0771 Punica granatum HOM05D005648 ORTHO05D007357 5.6e-66 255.8 426 41.5
FAN06G4900 Fragaria x ananassa HOM05D005648 ORTHO05D007357 3.6e-65 253.1 464 38.6
TWI23G0553 Tripterygium wilfordii HOM05D005648 ORTHO05D007357 3.6e-65 253.1 420 42.9
Potri.014G084800 Populus trichocarpa HOM05D005648 ORTHO05D007357 6.2e-65 252.3 419 41.5
DCAR_006931 Daucus carota HOM05D005648 ORTHO05D007357 1.1e-64 251.5 428 40.0
ECA234G0615 Erigeron canadensis HOM05D005648 ORTHO05D007357 1.4e-64 251.1 407 40.0
FAN10G1032 Fragaria x ananassa HOM05D005648 ORTHO05D007357 6.8e-64 248.8 455 38.5
Lsat_1_v5_gn_4_36080 Lactuca sativa HOM05D005648 ORTHO05D007357 1.5e-63 247.7 432 39.4
Duzib133G0061 Durio zibethinus HOM05D005648 ORTHO05D007357 5.8e-63 245.7 421 38.7
CiPaw.11G030900 Carya illinoinensis HOM05D005648 ORTHO05D007357 7.5e-63 245.4 410 40.5
RcHm_v2.0_Chr1g0355291 Rosa chinensis HOM05D005648 ORTHO05D007357 7.5e-63 245.4 465 38.1
TAR375G0141 Trochodendron aralioides HOM05D005648 ORTHO05D007357 1.3e-62 244.6 417 40.0
FAN06G1011 Fragaria x ananassa HOM05D005648 ORTHO05D007357 4.9e-62 242.7 455 38.0
MD01G1061000 Malus domestica HOM05D005648 ORTHO05D007357 6.4e-62 242.3 424 39.9
COL.COLO4_12714 Corchorus olitorius HOM05D005648 ORTHO05D007357 1.9e-61 240.7 373 40.2
PGSC0003DMG400000173 Solanum tuberosum HOM05D005648 ORTHO05D007357 3.2e-61 240.0 379 45.4
FAN01G1827 Fragaria x ananassa HOM05D005648 ORTHO05D007357 4.1e-61 239.6 453 39.1
Cc02_g38050 Coffea canephora HOM05D005648 ORTHO05D007357 2.7e-60 236.9 412 39.3
GSVIVG01026935001 Vitis vinifera HOM05D005648 ORTHO05D007357 3.5e-60 236.5 416 40.1
Dinv32486 Davidia involucrata HOM05D005648 ORTHO05D007357 7.8e-60 235.3 413 40.2
Glyma.07G070400 Glycine max HOM05D005648 ORTHO05D007357 1.3e-59 234.6 410 38.8
Gohir.D08G152800 Gossypium hirsutum HOM05D005648 ORTHO05D007357 3.3e-58 229.9 380 37.4
Dinv43819 Davidia involucrata HOM05D005648 ORTHO05D007357 1.6e-57 227.6 419 40.1
Aqoxy7G00304 Aquilegia oxysepala HOM05D005648 ORTHO05D007357 2.1e-57 227.3 422 38.6
THA.LOC104825838 Tarenaya hassleriana HOM05D005648 ORTHO05D007357 2.8e-57 226.9 442 36.4
Lj3g0021061 Lotus japonicus HOM05D005648 ORTHO05D007357 3.6e-57 226.5 413 39.2
SGA_v2.0_scaffold4G02313 Striga asiatica HOM05D005648 ORTHO05D007357 3.6e-57 226.5 379 39.6
Rhsim01G0157000 Rhododendron simsii HOM05D005648 ORTHO05D007357 8.1e-57 225.3 377 40.1
Rhsim01G0157500 Rhododendron simsii HOM05D005648 ORTHO05D007357 1.2e-55 221.5 389 38.8
Sp1g00620 Schrenkiella parvula HOM05D005648 ORTHO05D007357 2.0e-55 220.7 407 37.3
Cfa019074 Carpinus fangiana HOM05D005648 ORTHO05D007357 5.8e-55 219.2 349 41.8
VMungo0331G0956 Vigna mungo HOM05D005648 ORTHO05D007357 3.7e-54 216.5 421 35.9
MD07G1136800 Malus domestica HOM05D005648 ORTHO05D007357 1.9e-53 214.2 395 39.0
Aa31LG1G11030 Aethionema arabicum HOM05D005648 ORTHO05D007357 3.2e-53 213.4 435 34.0
Thhalv10007771m.g Eutrema salsugineum HOM05D005648 ORTHO05D007357 7.1e-53 212.2 413 36.3
Glyma.03G008900 Glycine max HOM05D005648 ORTHO05D007357 1.7e-51 207.6 338 42.0
Carub.0001s0053 Capsella rubella HOM05D005648 ORTHO05D007357 1.5e-50 204.5 455 33.6
Sed0027842 Sechium edule HOM05D005648 ORTHO05D007357 2.5e-50 203.8 421 34.4
TAR629G3222 Trochodendron aralioides HOM05D005648 ORTHO05D007357 2.5e-50 203.8 317 41.3
Atru.chr5.500 Acer truncatum HOM05D005648 ORTHO05D007357 4.3e-50 203.0 354 37.9
Lalb_Chr17g0339581 Lupinus albus HOM05D005648 ORTHO05D007357 5.6e-50 202.6 395 35.9
HanXRQChr16g0522761 Helianthus annuus HOM05D005648 ORTHO05D007357 2.8e-49 200.3 383 36.6
Cpa.g.sc11.6 Carica papaya HOM05D005648 ORTHO05D007357 4.0e-48 196.4 279 45.9
AL1G10680 Arabidopsis lyrata HOM05D005648 ORTHO05D007357 2.6e-47 193.7 453 34.0
AT1G01690 Arabidopsis thaliana HOM05D005648 ORTHO05D007357 2.6e-47 193.7 453 34.0
BolC7t43677H Brassica oleracea HOM05D005648 ORTHO05D007357 2.6e-47 193.7 462 32.5
Phvul.010G099300 Phaseolus vulgaris HOM05D005648 ORTHO05D007357 7.6e-47 192.2 423 34.0
BcaC06g34230 Brassica carinata HOM05D005648 ORTHO05D007357 2.2e-46 190.7 459 32.2
Ca_23631_v3 Cicer arietinum L. HOM05D005648 ORTHO05D007357 6.4e-46 189.1 460 33.3
Medtr8g030730 Medicago truncatula HOM05D005648 ORTHO05D007357 8.4e-46 188.7 393 33.8
ATR0680G381 Amborella trichopoda HOM05D005648 ORTHO05D007357 1.1e-45 188.3 418 31.8
AUR62004360 Chenopodium quinoa HOM05D005648 ORTHO05D007357 1.1e-45 188.3 397 34.8
CARHR000670 Cardamine hirsuta HOM05D005648 ORTHO05D007357 2.4e-45 187.2 455 34.1
BolC5t28826H Brassica oleracea HOM05D005648 ORTHO05D007357 3.2e-45 186.8 419 34.1
Psat4g155800 Pisum sativum HOM05D005648 ORTHO05D007357 5.4e-45 186.0 344 37.2
Ciclev10024354m.g Citrus clementina HOM05D005648 ORTHO05D007357 3.5e-44 183.3 252 42.9
A06p44840 Brassica napus HOM05D005648 ORTHO05D007357 3.0e-43 180.3 418 32.1
TPR.G10304 Trifolium pratense HOM05D005648 ORTHO05D007357 5.1e-43 179.5 326 37.1
MBI18_g45368_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 6.6e-43 179.1 268 39.9
BraA10t42311Z Brassica rapa HOM05D005648 ORTHO05D007357 1.1e-42 178.3 418 32.3
Eucgr.D02293 Eucalyptus grandis HOM05D005648 ORTHO05D007357 1.9e-42 177.6 252 42.1
C05p00330 Brassica napus HOM05D003351 ORTHO05D003806 2.5e-42 177.2 404 32.7
Nn1g01539 Nelumbo nucifera HOM05D005648 ORTHO05D007357 2.5e-42 177.2 400 35.8
A10p00320 Brassica napus HOM05D003351 ORTHO05D003806 4.3e-42 176.4 403 33.0
Actinidia12702 Actinidia chinensis HOM05D005648 ORTHO05D007357 9.6e-42 175.3 251 43.0
C07p31360 Brassica napus HOM05D005648 ORTHO05D008650 1.6e-41 174.5 429 31.0
PSO478G0111 Papaver somniferum HOM05D005648 ORTHO05D007357 2.8e-41 173.7 418 33.0
arahy.Tifrunner.gnm1.ann1.B5LD0B Arachis hypogaea HOM05D005648 ORTHO05D007357 8.1e-41 172.2 403 33.5
FAN03G1082 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.8e-40 171.0 208 50.0
BraA06t27356Z Brassica rapa HOM05D005648 ORTHO05D007357 4.0e-40 169.9 432 30.1
Actinidia33418 Actinidia chinensis HOM05D005648 ORTHO05D007357 8.4e-38 162.2 338 36.7
CDE04G3514 Ceratophyllum demersum HOM05D005648 ORTHO05D007357 3.2e-37 160.2 436 31.0
EL10Ac7g16797 Beta vulgaris HOM05D005648 ORTHO05D007357 9.3e-37 158.7 401 32.2
Duzib133G1405 Durio zibethinus HOM05D005648 ORTHO05D007357 1.6e-36 157.9 181 45.9
Lalb_Chr10g0096911 Lupinus albus HOM05D005648 ORTHO05D007357 3.5e-36 156.8 272 38.6
arahy.Tifrunner.gnm1.ann1.SJPY5G Arachis hypogaea HOM05D005648 ORTHO05D007357 4.6e-36 156.4 242 41.7
HPP92_008491 Vanilla planifolia HOM05D005648 ORTHO05D007357 2.5e-34 150.6 422 28.2
Sc23g0002870 Simmondsia chinensis HOM05D005648 ORTHO05D007357 4.3e-34 149.8 417 30.5
MBI18_g44363_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 7.3e-34 149.1 249 38.2
MELO3C006108.2 Cucumis melo HOM05D005648 ORTHO05D007357 2.8e-33 147.1 254 34.6
CSS0007131 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 6.2e-33 146.0 329 32.8
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 1.4e-32 144.8 254 38.6
CsaV3_3G008890 Cucumis sativus L. HOM05D003539 ORTHO05D004111 1.8e-32 144.4 313 29.7
ClCG05G001510 Citrullus lanatus HOM05D005648 ORTHO05D007357 1.2e-31 141.7 345 29.9
BcaC06g31348 Brassica carinata HOM05D005648 ORTHO05D007357 1.3e-30 138.3 460 28.7
AUR62022570 Chenopodium quinoa HOM05D005648 ORTHO05D007357 1.3e-30 138.3 332 31.9
Ah.05g180590 Amaranthus hybridus HOM05D005648 ORTHO05D007357 3.8e-30 136.7 428 31.1
SHI13451 Sapria himalayana HOM05D005648 ORTHO05D007357 2.4e-24 117.5 257 33.9
QL08p048682 Quercus lobata HOM05D005648 ORTHO05D007357 2.6e-23 114.0 115 54.8
Zm00001eb404350 Zea mays HOM05D005648 ORTHO05D007357 2.2e-22 110.9 277 32.1
Zm00001eb000540 Zea mays HOM05D005648 ORTHO05D007357 5.5e-21 106.3 265 30.9
unitig_26.g9738 Utricularia gibba HOM05D005648 ORTHO05D007357 9.3e-21 105.5 245 31.4
MBI01_g12685_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D007357 3.9e-19 100.1 115 46.1
BcaB03g13607 Brassica carinata HOM05D003351 ORTHO05D003806 2.1e-17 94.4 394 29.4
Os03g0106300 Oryza sativa ssp. japonica HOM05D005648 ORTHO05D007357 2.0e-15 87.8 258 30.2
arahy.Tifrunner.gnm1.ann1.QHU48Z Arachis hypogaea HOM05D005648 ORTHO05D007357 4.5e-15 86.7 117 42.7
CSS0009989 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 1.0e-14 85.5 97 49.5
MBI18_g40590_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 6.5e-14 82.8 260 27.7
MBI18_g42710_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.9e-13 81.3 80 47.5
vmacro20940 Vaccinium macrocarpon HOM05D005648 ORTHO05D007357 2.3e-11 74.3 134 39.6
MBI17_g41096_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 5.1e-11 73.2 68 50.0
MBI19_g11759_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D002414 2.5e-10 70.9 76 47.4
MBI06_g29680_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 3.3e-10 70.5 129 37.2
MBI06_g27427_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.6e-09 68.2 71 47.9
Ciclev10024524m.g Citrus clementina HOM05D005648 ORTHO05D007357 8.2e-09 65.9 64 56.2
Sabra02G0127100 Salix brachista HOM05D005648 ORTHO05D007357 6.9e-08 62.8 155 32.9
Eucgr.D02411 Eucalyptus grandis HOM05D005648 ORTHO05D029324 9.0e-08 62.4 127 36.2
Eucgr.D02400 Eucalyptus grandis HOM05D005648 ORTHO05D029324 2.0e-07 61.2 126 35.7


User provided reference genes

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