Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.8e-151 539.3 274 100.0
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 7.2e-137 490.7 297 86.5
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 8.5e-130 467.2 252 93.3
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 2.0e-126 456.1 252 90.9
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 4.4e-126 454.9 252 90.5
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 1.7e-125 453.0 252 90.1
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 3.8e-122 441.8 252 89.3
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 1.8e-116 422.9 252 82.9
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 4.4e-110 401.7 252 78.6
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 2.4e-108 396.0 252 78.6
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.7e-106 389.8 252 77.4
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 5.0e-106 388.3 252 75.8
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 2.5e-105 386.0 254 76.0
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 4.7e-104 381.7 255 73.7
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 1.4e-103 380.2 260 71.9
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 2.3e-103 379.4 251 73.7
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 4.0e-103 378.6 251 74.9
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 2.0e-102 376.3 251 73.7
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 2.0e-102 376.3 252 72.6
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 2.0e-102 376.3 252 73.8
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 4.4e-102 375.2 252 72.2
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 5.7e-102 374.8 252 72.2
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 2.2e-101 372.9 252 73.4
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 4.8e-101 371.7 271 69.7
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 6.3e-101 371.3 252 73.4
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 8.3e-101 370.9 249 73.5
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.1e-100 370.5 252 72.2
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 1.4e-100 370.2 258 72.5
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 3.1e-100 369.0 252 72.2
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 4.1e-100 368.6 254 70.5
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 5.4e-100 368.2 249 73.1
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 5.4e-100 368.2 254 72.4
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 7.0e-100 367.9 251 72.9
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 1.6e-99 366.7 250 72.4
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 2.7e-99 365.9 257 70.8
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 3.5e-99 365.5 252 72.6
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 3.5e-99 365.5 254 72.0
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 3.5e-99 365.5 251 70.9
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 4.5e-99 365.2 250 73.6
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.3e-98 363.6 250 73.2
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 1.3e-98 363.6 253 70.4
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.3e-98 363.6 251 70.1
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 1.3e-98 363.6 253 73.1
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 1.7e-98 363.2 253 70.4
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 6.5e-98 361.3 252 71.4
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 6.5e-98 361.3 254 71.7
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 8.6e-98 360.9 250 71.2
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 8.6e-98 360.9 250 71.2
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 8.6e-98 360.9 251 69.7
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 1.1e-97 360.5 257 70.4
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 2.5e-97 359.4 253 70.8
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 3.2e-97 359.0 252 70.6
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 5.5e-97 358.2 249 72.3
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 5.5e-97 358.2 250 69.2
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 7.2e-97 357.8 257 70.0
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 1.2e-96 357.1 253 69.2
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 1.6e-96 356.7 257 69.6
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 2.1e-96 356.3 276 67.4
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 2.8e-96 355.9 253 70.8
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 3.6e-96 355.5 267 68.5
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 3.6e-96 355.5 252 71.0
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 6.1e-96 354.8 253 71.1
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 1.8e-95 353.2 236 73.3
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 3.0e-95 352.4 256 69.9
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 4.0e-95 352.1 250 70.8
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 6.8e-95 351.3 253 70.0
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 6.8e-95 351.3 253 70.0
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 8.8e-95 350.9 258 69.4
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 8.8e-95 350.9 263 67.7
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 8.8e-95 350.9 255 71.4
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 2.6e-94 349.4 257 68.5
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 2.6e-94 349.4 257 68.5
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 3.4e-94 349.0 252 68.7
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 5.7e-94 348.2 256 68.0
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 7.5e-94 347.8 232 72.8
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 4.9e-93 345.1 257 68.5
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 6.3e-93 344.7 260 65.8
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 6.3e-93 344.7 260 66.2
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 1.4e-92 343.6 269 66.5
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 1.4e-92 343.6 228 72.4
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 1.8e-92 343.2 258 67.4
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 1.8e-92 343.2 250 69.6
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 4.1e-92 342.0 256 68.0
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 5.4e-92 341.7 254 68.1
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 1.6e-91 340.1 226 73.0
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 2.0e-91 339.7 254 67.3
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 1.0e-90 337.4 237 67.1
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 1.7e-90 336.7 303 59.1
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 2.5e-89 332.8 240 69.2
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 3.3e-89 332.4 232 71.6
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 7.3e-89 331.3 256 68.8
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 1.2e-88 330.5 252 67.1
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 6.8e-87 324.7 254 65.4
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 1.5e-86 323.6 253 64.4
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 4.4e-86 322.0 237 67.9
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 1.1e-84 317.4 224 71.9
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 7.0e-84 314.7 252 63.9
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 8.6e-82 307.8 233 66.1
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 3.3e-81 305.8 203 73.9
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 3.3e-81 305.8 259 62.2
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 4.3e-81 305.4 201 75.6
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 2.3e-79 299.7 251 62.5
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 7.5e-78 294.7 256 61.3
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 3.7e-77 292.4 253 58.5
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 4.9e-77 292.0 256 59.8
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 3.2e-76 289.3 199 73.4
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 1.8e-71 273.5 192 71.9
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 5.2e-71 271.9 161 81.4
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 8.3e-69 264.6 206 64.6
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 1.9e-68 263.5 276 54.0
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 5.4e-68 261.9 247 58.3
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 3.5e-67 259.2 243 57.2
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 4.0e-63 245.7 177 68.4
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 5.2e-63 245.4 226 57.5
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 4.4e-62 242.3 184 64.1
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 1.3e-58 230.7 247 52.2
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 4.7e-56 222.2 218 56.4
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 1.4e-55 220.7 257 52.1
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 4.2e-52 209.1 115 86.1
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 9.0e-47 191.4 135 66.7
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 7.6e-46 188.3 147 66.7
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.1e-43 180.3 101 82.2
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 1.2e-38 164.5 140 58.6
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.5e-38 164.1 269 39.0
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 2.7e-35 153.3 140 56.4
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 9.0e-31 138.3 90 74.4
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 3.9e-26 122.9 65 81.5
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 2.2e-24 117.1 117 53.8
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 9.0e-23 111.7 57 87.7
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 1.4e-20 104.4 76 68.4
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 3.2e-20 103.2 72 63.9
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 1.8e-18 97.4 73 71.2
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 8.8e-18 95.1 72 68.1
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.7e-16 90.9 77 62.3
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 5.3e-15 85.9 76 59.2
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 4.2e-12 76.3 43 81.4
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 7.9e-11 72.0 60 63.3
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 5.1e-10 69.3 66 57.6
PRCOL_00006457 Prasinoderma coloniale HOM05D005643 ORTHO05D006819 6.9e-07 58.9 144 34.0
MBI07_g43742_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.2e-06 58.2 73 54.8
CAN.G129.52 Capsicum annuum HOM05D001089 ORTHO05D000920 7.7e-06 55.5 30 80.0


User provided reference genes

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