Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006715g0020 Nicotiana tabacum HOM05D005775 ORTHO05D000023 2.3e-63 245.4 121 100.0
ClCG00G003600 Citrullus lanatus HOM05D005775 ORTHO05D000023 3.7e-29 131.7 124 57.3
Peaxi162Scf00517g00426 Petunia axillaris HOM05D005775 ORTHO05D000023 4.7e-24 114.8 171 43.9
SHI15422 Sapria himalayana HOM05D005775 ORTHO05D000023 1.5e-22 109.8 170 38.2
Carub.0004s3072 Capsella rubella HOM05D005775 ORTHO05D000023 1.2e-19 100.1 172 36.6
ClCG00G000230 Citrullus lanatus HOM05D005775 ORTHO05D000023 2.5e-17 92.4 81 54.3
Prupe.8G249700 Prunus persica HOM05D005775 ORTHO05D000023 1.8e-15 86.3 171 35.1
Rhsim01G0278600 Rhododendron simsii HOM05D005775 ORTHO05D000023 6.8e-15 84.3 172 34.3
Lj2C1182T1 Lonicera japonica HOM05D005775 ORTHO05D000023 2.0e-14 82.8 171 33.3
CSS0012831 Camellia sinensis var. sinensis HOM05D005775 ORTHO05D000023 5.8e-14 81.3 171 35.7
Potri.016G119600 Populus trichocarpa HOM05D005775 ORTHO05D000023 2.9e-13 79.0 171 32.7
vmacro14952 Vaccinium macrocarpon HOM05D005775 ORTHO05D000023 2.9e-13 79.0 171 33.3
Aqoxy2G03167 Aquilegia oxysepala HOM05D005775 ORTHO05D000023 6.4e-13 77.8 171 32.2
Actinidia24301 Actinidia chinensis HOM05D005775 ORTHO05D000023 2.4e-12 75.9 171 32.7
EL10Ac7g17159 Beta vulgaris HOM05D005775 ORTHO05D000023 9.2e-12 73.9 171 29.8
Haze_04786 Corylus avellana HOM05D005775 ORTHO05D000023 9.2e-12 73.9 171 32.7
PGSC0003DMG400026158 Solanum tuberosum HOM05D005775 ORTHO05D000023 1.6e-11 73.2 53 73.6
Solyc07g053060.3 Solanum lycopersicum HOM05D005775 ORTHO05D000023 2.7e-11 72.4 46 82.6
Sopen07g026610 Solanum pennellii HOM05D005775 ORTHO05D000023 2.7e-11 72.4 46 82.6
Thecc.01G287300 Theobroma cacao HOM05D005775 ORTHO05D000023 2.7e-11 72.4 171 32.2
CAN.G438.46 Capsicum annuum HOM05D005775 ORTHO05D000023 3.5e-11 72.0 45 82.2
vmacro02530 Vaccinium macrocarpon HOM05D005775 ORTHO05D000023 3.5e-11 72.0 171 32.7
Lj1g0019119 Lotus japonicus HOM05D005775 ORTHO05D000023 7.8e-11 70.9 171 32.7
Gohir.A08G071400 Gossypium hirsutum HOM05D005775 ORTHO05D000023 1.3e-10 70.1 171 32.2
Gorai.004G084600 Gossypium raimondii HOM05D005775 ORTHO05D000023 1.3e-10 70.1 171 32.2
ATR0487G016 Amborella trichopoda HOM05D005775 ORTHO05D000023 1.7e-10 69.7 179 29.6
Gohir.D08G079600 Gossypium hirsutum HOM05D005775 ORTHO05D000023 1.7e-10 69.7 171 31.6
C04p19810 Brassica napus HOM05D005775 ORTHO05D000023 3.0e-10 68.9 138 34.1
Ciclev10019759m.g Citrus clementina HOM05D005775 ORTHO05D000023 5.1e-10 68.2 169 30.2
Medtr2g049540 Medicago truncatula HOM05D005775 ORTHO05D000023 8.6e-10 67.4 171 29.2
Medtr5g076010 Medicago truncatula HOM05D005775 ORTHO05D000023 1.1e-09 67.0 171 29.2
BraA04t17874Z Brassica rapa HOM05D005775 ORTHO05D000023 2.5e-09 65.9 171 28.1
Dinv32979 Davidia involucrata HOM05D005775 ORTHO05D000023 2.5e-09 65.9 46 73.9
FAN20G1843 Fragaria x ananassa HOM05D005775 ORTHO05D000023 2.5e-09 65.9 171 29.8
BolC4t23514H Brassica oleracea HOM05D005775 ORTHO05D000023 3.3e-09 65.5 124 35.5
Dinv11278 Davidia involucrata HOM05D005775 ORTHO05D000023 5.6e-09 64.7 46 71.7
ECA234G1745 Erigeron canadensis HOM05D005775 ORTHO05D000023 7.3e-09 64.3 175 28.6
Hma1.2p1_0209F.1_g089290 Hydrangea macrophylla HOM05D005775 ORTHO05D000023 9.5e-09 63.9 46 73.9
Glyma.03G148400 Glycine max HOM05D005775 ORTHO05D000023 1.2e-08 63.5 171 28.7
Lalb_Chr17g0335721 Lupinus albus HOM05D005775 ORTHO05D000023 1.2e-08 63.5 172 30.2
ClCG00G000240 Citrullus lanatus HOM05D005775 ORTHO05D000023 1.6e-08 63.2 46 73.9
ClCG10G003500 Citrullus lanatus HOM05D005775 ORTHO05D000023 1.6e-08 63.2 46 73.9
Cc01_g19990 Coffea canephora HOM05D005775 ORTHO05D000023 1.6e-08 63.2 53 60.4
FAN27G3110 Fragaria x ananassa HOM05D005775 ORTHO05D000023 1.6e-08 63.2 171 29.8
Oeu047904.1 Olea europaea HOM05D005775 ORTHO05D000023 1.6e-08 63.2 53 60.4
TAR365G0919 Trochodendron aralioides HOM05D005775 ORTHO05D000023 1.6e-08 63.2 46 69.6
BolC4t27488H Brassica oleracea HOM05D005775 ORTHO05D000023 2.1e-08 62.8 171 27.5
Migut.N02129 Erythranthe guttata HOM05D005775 ORTHO05D000023 2.1e-08 62.8 53 58.5
Migut.O00883 Erythranthe guttata HOM05D005775 ORTHO05D000023 2.1e-08 62.8 53 58.5
TAR636G1825 Trochodendron aralioides HOM05D005775 ORTHO05D000023 2.1e-08 62.8 46 67.4
GSVIVG01011040001 Vitis vinifera HOM05D005775 ORTHO05D000023 2.8e-08 62.4 46 71.7
AT2G30780 Arabidopsis thaliana HOM05D005775 ORTHO05D000023 3.6e-08 62.0 171 25.7
CiPaw.09G181700 Carya illinoinensis HOM05D005775 ORTHO05D000023 3.6e-08 62.0 46 73.9
Sabra16G0115500 Salix brachista HOM05D005775 ORTHO05D000023 3.6e-08 62.0 171 28.1
Sed0017897 Sechium edule HOM05D005775 ORTHO05D000023 3.6e-08 62.0 46 71.7
THA.LOC104800814 Tarenaya hassleriana HOM05D005775 ORTHO05D000023 4.7e-08 61.6 171 25.1
Thhalv10016605m.g Eutrema salsugineum HOM05D005775 ORTHO05D000023 6.2e-08 61.2 172 27.9
Glyma.19G151700 Glycine max HOM05D005775 ORTHO05D000023 6.2e-08 61.2 171 31.0
MD11G1295800 Malus domestica HOM05D005775 ORTHO05D000023 6.2e-08 61.2 46 65.2
COL.COLO4_08057 Corchorus olitorius HOM05D005775 ORTHO05D000023 8.1e-08 60.8 46 67.4
Aa31LG5G6080 Aethionema arabicum HOM05D005775 ORTHO05D000023 1.1e-07 60.5 175 28.6
MSTRG.12583 Avicennia marina HOM05D005775 ORTHO05D000023 1.1e-07 60.5 53 54.7
MD03G1273200 Malus domestica HOM05D005775 ORTHO05D000023 1.1e-07 60.5 46 67.4
CARHR124250 Cardamine hirsuta HOM05D005775 ORTHO05D000023 1.4e-07 60.1 172 27.9
CANSAT25G1854 Cannabis sativa HOM05D005775 ORTHO05D000023 1.8e-07 59.7 46 63.0
Eucgr.H01610 Eucalyptus grandis HOM05D005775 ORTHO05D000023 1.8e-07 59.7 46 67.4
Sed0008104 Sechium edule HOM05D005775 ORTHO05D000023 1.8e-07 59.7 46 67.4
CsaV3_3G003500 Cucumis sativus L. HOM05D005775 ORTHO05D000023 2.3e-07 59.3 46 69.6
QL12p023176 Quercus lobata HOM05D005775 ORTHO05D000023 2.3e-07 59.3 46 65.2
Rhsim13G0020300 Rhododendron simsii HOM05D005775 ORTHO05D000023 2.3e-07 59.3 46 69.6
AL4G25710 Arabidopsis lyrata HOM05D005775 ORTHO05D000023 3.1e-07 58.9 171 24.6
Sp4g13280 Schrenkiella parvula HOM05D005775 ORTHO05D000023 3.1e-07 58.9 173 26.6
A04p23470 Brassica napus HOM05D005775 ORTHO05D000023 4.0e-07 58.5 46 58.7
C04p59780 Brassica napus HOM05D005775 ORTHO05D000023 4.0e-07 58.5 46 58.7
SGA_v2.0_scaffold172G39044 Striga asiatica HOM05D005775 ORTHO05D000023 4.0e-07 58.5 53 54.7
MELO3C014018.2 Cucumis melo HOM05D005775 ORTHO05D000023 5.2e-07 58.2 46 65.2
FAN24G2890 Fragaria x ananassa HOM05D005775 ORTHO05D000023 5.2e-07 58.2 46 65.2
RcHm_v2.0_Chr6g0292231 Rosa chinensis HOM05D005775 ORTHO05D000023 5.2e-07 58.2 171 28.7
DCAR_005831 Daucus carota HOM05D005775 ORTHO05D000023 6.8e-07 57.8 168 28.0
THA.LOC104817539 Tarenaya hassleriana HOM05D005775 ORTHO05D000023 6.8e-07 57.8 171 26.9
Cpa.g.sc731.2 Carica papaya HOM05D005775 ORTHO05D000023 8.9e-07 57.4 46 63.0
AL4G25690 Arabidopsis lyrata HOM05D005775 ORTHO05D000023 1.2e-06 57.0 171 24.0
AUR62037928 Chenopodium quinoa HOM05D005775 ORTHO05D000023 1.2e-06 57.0 171 27.5
Actinidia24862 Actinidia chinensis HOM05D005775 ORTHO05D000023 1.5e-06 56.6 46 65.2
Ah.08g220410 Amaranthus hybridus HOM05D005775 ORTHO05D000023 1.5e-06 56.6 53 54.7
Carub.0004s1199 Capsella rubella HOM05D005775 ORTHO05D000023 1.5e-06 56.6 171 26.3
Nn5g27607 Nelumbo nucifera HOM05D005775 ORTHO05D000023 1.5e-06 56.6 46 56.5
DCAR_002776 Daucus carota HOM05D005775 ORTHO05D000023 2.0e-06 56.2 172 29.7
TWI14G1024 Tripterygium wilfordii HOM05D005775 ORTHO05D000023 2.0e-06 56.2 171 26.9
HanXRQChr12g0362741 Helianthus annuus HOM05D005775 ORTHO05D000023 2.6e-06 55.8 172 29.7
Psat1g018400 Pisum sativum HOM05D005775 ORTHO05D000023 2.6e-06 55.8 46 60.9
Sc17g0003740 Simmondsia chinensis HOM05D005775 ORTHO05D000023 2.6e-06 55.8 53 56.6
HPP92_003166 Vanilla planifolia HOM05D005775 ORTHO05D000023 3.4e-06 55.5 172 26.2
AUR62043492 Chenopodium quinoa HOM05D005775 ORTHO05D006285 4.4e-06 55.1 53 56.6
CARHR143390 Cardamine hirsuta HOM05D005775 ORTHO05D000023 7.6e-06 54.3 172 27.3
CDE10G1068 Ceratophyllum demersum HOM05D005775 ORTHO05D000023 7.6e-06 54.3 44 56.8
FvH4_2g24360 Fragaria vesca HOM05D005775 ORTHO05D000023 7.6e-06 54.3 30 83.3
arahy.Tifrunner.gnm1.ann1.84DKWJ Arachis hypogaea HOM05D005775 ORTHO05D000023 9.9e-06 53.9 80 40.0
SEGI_28259 Sequoiadendron giganteum HOM05D005775 ORTHO05D000023 9.9e-06 53.9 50 56.0


User provided reference genes

Program Settings