Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006695g0040 Nicotiana tabacum HOM05D000916 ORTHO05D009274 2.6e-93 345.5 194 100.0
Nitab4.5_0002888g0050 Nicotiana tabacum HOM05D000916 ORTHO05D009274 1.2e-64 250.4 229 62.4
Peaxi162Scf01108g00212 Petunia axillaris HOM05D000916 ORTHO05D009274 8.0e-50 201.1 232 55.6
PGSC0003DMG400006832 Solanum tuberosum HOM05D000916 ORTHO05D009274 5.9e-45 184.9 232 53.4
Solyc01g088030.4 Solanum lycopersicum HOM05D000916 ORTHO05D009274 3.3e-43 179.1 230 52.2
Sopen01g034920 Solanum pennellii HOM05D000916 ORTHO05D009274 2.1e-42 176.4 230 52.2
CAN.G410.4 Capsicum annuum HOM05D000916 ORTHO05D009274 2.0e-40 169.9 231 51.5
Dinv07424 Davidia involucrata HOM05D000916 ORTHO05D009274 8.4e-23 111.3 161 45.3
Cc04_g14680 Coffea canephora HOM05D000916 ORTHO05D009274 2.3e-20 103.2 228 36.8
Oeu049471.1 Olea europaea HOM05D000916 ORTHO05D009274 4.3e-19 99.0 175 41.7
Lj9P642T24 Lonicera japonica HOM05D000916 ORTHO05D009274 1.2e-18 97.4 126 47.6
PGR031G2328 Punica granatum HOM05D000916 ORTHO05D009274 2.8e-18 96.3 175 37.1
TAR636G0367 Trochodendron aralioides HOM05D000916 ORTHO05D009274 2.8e-18 96.3 143 42.7
COL.COLO4_12325 Corchorus olitorius HOM05D000916 ORTHO05D003833 4.7e-18 95.5 160 39.4
Nn2g15166 Nelumbo nucifera HOM05D000916 ORTHO05D009274 4.7e-18 95.5 142 42.3
Rhsim07G0060200 Rhododendron simsii HOM05D000916 ORTHO05D009274 4.7e-18 95.5 128 45.3
FvH4_7g01930 Fragaria vesca HOM05D000916 ORTHO05D009274 6.2e-18 95.1 158 40.5
FAN06G1234 Fragaria x ananassa HOM05D000916 ORTHO05D009274 6.2e-18 95.1 158 40.5
TAR636G3509 Trochodendron aralioides HOM05D000916 ORTHO05D009274 8.1e-18 94.7 143 42.0
Atru.chr11.2553 Acer truncatum HOM05D000916 ORTHO05D009274 2.4e-17 93.2 123 45.5
RcHm_v2.0_Chr1g0318771 Rosa chinensis HOM05D000916 ORTHO05D009274 2.4e-17 93.2 158 40.5
FAN03G1280 Fragaria x ananassa HOM05D000916 ORTHO05D009274 4.0e-17 92.4 158 39.9
CiPaw.14G004300 Carya illinoinensis HOM05D000916 ORTHO05D009274 5.2e-17 92.0 122 45.1
THA.LOC104826696 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 5.2e-17 92.0 162 40.7
THA.LOC104826705 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 5.2e-17 92.0 162 40.7
Actinidia06285 Actinidia chinensis HOM05D000916 ORTHO05D009274 2.0e-16 90.1 126 46.0
Gohir.D08G065100 Gossypium hirsutum HOM05D000916 ORTHO05D009274 2.0e-16 90.1 143 41.3
Gorai.004G067400 Gossypium raimondii HOM05D000916 ORTHO05D009274 2.0e-16 90.1 143 41.3
Cpa.g.sc197.27 Carica papaya HOM05D000916 ORTHO05D009274 2.6e-16 89.7 165 35.8
Manes.07G012200 Manihot esculenta HOM05D000916 ORTHO05D009274 3.4e-16 89.4 179 36.9
Psat0s488g0040 Pisum sativum HOM05D000916 ORTHO05D009274 7.6e-16 88.2 143 39.2
GSVIVG01001443001 Vitis vinifera HOM05D000916 ORTHO05D009274 1.3e-15 87.4 122 45.1
arahy.Tifrunner.gnm1.ann1.W0KZJE Arachis hypogaea HOM05D000916 ORTHO05D009274 1.7e-15 87.0 144 41.0
Eucgr.G03277 Eucalyptus grandis HOM05D000916 ORTHO05D009274 1.7e-15 87.0 125 42.4
Potri.001G259216 Populus trichocarpa HOM05D000916 ORTHO05D009274 1.7e-15 87.0 143 41.3
Potri.001G259900 Populus trichocarpa HOM05D000916 ORTHO05D009274 1.7e-15 87.0 143 41.3
Rhsim07G0060800 Rhododendron simsii HOM05D000916 ORTHO05D009274 1.7e-15 87.0 178 37.6
Aqoxy2G00212 Aquilegia oxysepala HOM05D000916 ORTHO05D009274 2.2e-15 86.7 138 39.1
Migut.N01806 Erythranthe guttata HOM05D000916 ORTHO05D009274 2.2e-15 86.7 159 37.1
Medtr0003s0480 Medicago truncatula HOM05D000916 ORTHO05D009274 2.2e-15 86.7 146 38.4
DCAR_022368 Daucus carota HOM05D000916 ORTHO05D009274 2.9e-15 86.3 151 41.1
MELO3C024009.2 Cucumis melo HOM05D000916 ORTHO05D009274 3.8e-15 85.9 181 34.3
Lsat_1_v5_gn_7_34400 Lactuca sativa HOM05D000916 ORTHO05D009274 3.8e-15 85.9 177 36.7
TWI53G0499 Tripterygium wilfordii HOM05D000916 ORTHO05D009274 3.8e-15 85.9 145 37.9
AUR62023107 Chenopodium quinoa HOM05D000916 ORTHO05D009274 4.9e-15 85.5 176 33.5
Potri.001G260600 Populus trichocarpa HOM05D000916 ORTHO05D009274 4.9e-15 85.5 122 44.3
Lj3g0014758 Lotus japonicus HOM05D000916 ORTHO05D009274 8.4e-15 84.7 146 39.7
PSO170G4961 Papaver somniferum HOM05D000916 ORTHO05D009274 8.4e-15 84.7 124 41.1
Sed0025824 Sechium edule HOM05D000916 ORTHO05D009274 8.4e-15 84.7 142 37.3
THA.LOC104827433 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 8.4e-15 84.7 145 42.1
EL10Ac2g04385 Beta vulgaris HOM05D000916 ORTHO05D009274 1.1e-14 84.3 124 40.3
MSTRG.5047 Avicennia marina HOM05D000916 ORTHO05D009274 1.4e-14 84.0 227 33.9
CSS0046245 Camellia sinensis var. sinensis HOM05D000916 ORTHO05D009274 4.2e-14 82.4 122 44.3
Prupe.2G025000 Prunus persica HOM05D000916 ORTHO05D009274 4.2e-14 82.4 162 37.0
Ciclev10032919m.g Citrus clementina HOM05D000916 ORTHO05D009274 5.4e-14 82.0 122 41.0
Thhalv10003279m.g Eutrema salsugineum HOM05D000916 ORTHO05D009274 5.4e-14 82.0 175 40.0
A02p27690 Brassica napus HOM05D000916 ORTHO05D009274 7.1e-14 81.6 161 38.5
BraA02t07808Z Brassica rapa HOM05D000916 ORTHO05D009274 7.1e-14 81.6 161 38.5
vmacro13705 Vaccinium macrocarpon HOM05D000916 ORTHO05D009274 7.1e-14 81.6 178 33.7
CsaV3_3G031830 Cucumis sativus L. HOM05D000916 ORTHO05D009274 9.3e-14 81.3 177 35.0
Sp2g08020 Schrenkiella parvula HOM05D000916 ORTHO05D009274 9.3e-14 81.3 176 36.9
FAN03G2260 Fragaria x ananassa HOM05D000916 ORTHO05D009274 1.2e-13 80.9 144 39.6
Carub.0008s0547 Capsella rubella HOM05D000916 ORTHO05D009274 4.6e-13 79.0 147 38.1
HanXRQChr15g0480451 Helianthus annuus HOM05D000916 ORTHO05D009274 7.8e-13 78.2 165 36.4
ATR0782G182 Amborella trichopoda HOM05D000916 ORTHO05D009274 1.0e-12 77.8 151 35.1
Phvul.011G013300 Phaseolus vulgaris HOM05D000916 ORTHO05D009274 1.0e-12 77.8 147 35.4
SGA_v2.0_scaffold5G02941 Striga asiatica HOM05D000916 ORTHO05D009274 3.0e-12 76.3 124 41.1
AT5G43210 Arabidopsis thaliana HOM05D000916 ORTHO05D009274 8.7e-12 74.7 147 38.8
ClCG10G012070 Citrullus lanatus HOM05D000916 ORTHO05D009274 8.7e-12 74.7 165 35.2
Glyma.09G226100 Glycine max HOM05D000916 ORTHO05D009274 1.1e-11 74.3 127 37.8
PSO210G2598 Papaver somniferum HOM05D000916 ORTHO05D009274 1.1e-11 74.3 124 37.9
VMungo1127G0561 Vigna mungo HOM05D000916 ORTHO05D009274 1.1e-11 74.3 172 35.5
MD02G1299300 Malus domestica HOM05D000916 ORTHO05D009274 1.9e-11 73.6 62 56.5
Sc11g0009010 Simmondsia chinensis HOM05D000916 ORTHO05D009274 1.9e-11 73.6 154 37.0
AUR62009428 Chenopodium quinoa HOM05D000916 ORTHO05D009274 2.5e-11 73.2 68 48.5
BcaB07g30592 Brassica carinata HOM05D000916 ORTHO05D009274 3.3e-11 72.8 144 36.8
MBI11_g21817_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D009274 3.3e-11 72.8 125 40.0
Aa31LG9G13290 Aethionema arabicum HOM05D000916 ORTHO05D009274 7.3e-11 71.6 122 40.2
Duzib133G0774 Durio zibethinus HOM05D000916 ORTHO05D009274 4.8e-10 68.9 133 37.6
CDE11G0804 Ceratophyllum demersum HOM05D000916 ORTHO05D009274 1.8e-09 67.0 126 34.9
RcHm_v2.0_Chr1g0318631 Rosa chinensis HOM05D000916 ORTHO05D009274 1.8e-09 67.0 60 55.0
CANSAT80G0736 Cannabis sativa HOM05D000916 ORTHO05D009274 2.4e-09 66.6 128 37.5
Gohir.A08G055800 Gossypium hirsutum HOM05D000916 ORTHO05D009274 1.2e-08 64.3 60 55.0
Ah.16g100710 Amaranthus hybridus HOM05D000916 ORTHO05D009274 1.5e-08 63.9 68 48.5
Hma1.2p1_0579F.1_g182540 Hydrangea macrophylla HOM05D000916 ORTHO05D009274 1.5e-08 63.9 90 43.3
Potri.001G260300 Populus trichocarpa HOM05D000916 ORTHO05D009274 2.6e-08 63.2 113 38.9
Zm00001eb405020 Zea mays HOM05D000916 ORTHO05D009274 7.6e-08 61.6 123 36.6
Os11g0146550 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D009274 2.2e-07 60.1 128 34.4
Sabra16G0159300 Salix brachista HOM05D000916 ORTHO05D009274 3.8e-07 59.3 60 51.7
TAR636G0653 Trochodendron aralioides HOM05D000916 ORTHO05D009274 1.1e-06 57.8 108 37.0


User provided reference genes

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