Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006639g0130 Nicotiana tabacum HOM05D000568 ORTHO05D000628 4.1e-63 244.6 125 100.0
Nitab4.5_0002233g0030 Nicotiana tabacum HOM05D000568 ORTHO05D000628 2.1e-35 152.5 127 70.9
Nitab4.5_0001308g0180 Nicotiana tabacum HOM05D000568 ORTHO05D000628 1.4e-34 149.8 127 68.5
Nitab4.5_0001653g0090 Nicotiana tabacum HOM05D000568 ORTHO05D000628 3.6e-27 125.2 127 58.3
PGSC0003DMG400016236 Solanum tuberosum HOM05D000568 ORTHO05D000628 3.6e-27 125.2 128 58.6
Nitab4.5_0011656g0010 Nicotiana tabacum HOM05D000568 ORTHO05D000628 1.0e-26 123.6 127 57.5
CAN.G1177.12 Capsicum annuum HOM05D000568 ORTHO05D000628 8.9e-26 120.6 127 57.5
Solyc11g008900.2 Solanum lycopersicum HOM05D000568 ORTHO05D000628 1.3e-24 116.7 127 56.7
Sopen11g004680 Solanum pennellii HOM05D000568 ORTHO05D000628 1.3e-24 116.7 127 56.7
Peaxi162Scf00253g00721 Petunia axillaris HOM05D000568 ORTHO05D000628 6.4e-24 114.4 127 56.7
Dinv06978 Davidia involucrata HOM05D000568 ORTHO05D000628 2.5e-20 102.4 135 51.9
Hma1.2p1_0123F.1_g057910 Hydrangea macrophylla HOM05D000568 ORTHO05D000628 2.1e-19 99.4 135 50.4
FAN05G2012 Fragaria x ananassa HOM05D000568 ORTHO05D000628 4.7e-19 98.2 134 48.5
Dinv29110 Davidia involucrata HOM05D000568 ORTHO05D000628 8.0e-19 97.4 135 50.4
CSS0035731 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D000628 1.1e-18 97.1 134 51.5
Peaxi162Scf00344g01114 Petunia axillaris HOM05D000568 ORTHO05D000628 3.1e-18 95.5 127 51.2
MD12G1259900 Malus domestica HOM05D000568 ORTHO05D000628 4.0e-18 95.1 133 50.4
AUR62006665 Chenopodium quinoa HOM05D000568 ORTHO05D000628 8.9e-18 94.0 131 48.9
FAN02G1199 Fragaria x ananassa HOM05D000568 ORTHO05D000628 8.9e-18 94.0 133 47.4
AUR62000319 Chenopodium quinoa HOM05D000568 ORTHO05D000628 1.5e-17 93.2 131 48.9
FvH4_6g00570 Fragaria vesca HOM05D000568 ORTHO05D000628 1.5e-17 93.2 133 47.4
FAN09G0846 Fragaria x ananassa HOM05D000568 ORTHO05D000628 1.5e-17 93.2 133 47.4
FAN14G5758 Fragaria x ananassa HOM05D000568 ORTHO05D000628 1.5e-17 93.2 133 47.4
Atru.chr12.1796 Acer truncatum HOM05D000568 ORTHO05D000628 2.0e-17 92.8 133 48.9
TAR362G0496 Trochodendron aralioides HOM05D000568 ORTHO05D000628 2.0e-17 92.8 135 47.4
Manes.08G104100 Manihot esculenta HOM05D000568 ORTHO05D000628 2.6e-17 92.4 133 49.6
Prupe.6G360600 Prunus persica HOM05D000568 ORTHO05D000628 2.6e-17 92.4 133 48.9
MD04G1244100 Malus domestica HOM05D000568 ORTHO05D000628 7.5e-17 90.9 133 48.9
RcHm_v2.0_Chr3g0447961 Rosa chinensis HOM05D000568 ORTHO05D000628 7.5e-17 90.9 133 47.4
Cfa006270 Carpinus fangiana HOM05D000568 ORTHO05D000628 2.2e-16 89.4 133 46.6
EL10Ac4g09976 Beta vulgaris HOM05D000568 ORTHO05D000628 2.9e-16 89.0 128 48.4
MBI11_g07421_MAGBIO Magnolia biondii HOM05D000568 ORTHO05D000628 2.9e-16 89.0 135 45.9
Sabra19G0062700 Salix brachista HOM05D000568 ORTHO05D000628 4.9e-16 88.2 134 47.8
Potri.013G086800 Populus trichocarpa HOM05D000568 ORTHO05D000628 6.4e-16 87.8 134 47.0
Potri.019G053200 Populus trichocarpa HOM05D000568 ORTHO05D000628 1.1e-15 87.0 134 47.0
CSS0012695 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D000628 1.9e-15 86.3 135 48.1
Nn1g09782 Nelumbo nucifera HOM05D000568 ORTHO05D000628 1.9e-15 86.3 135 47.4
Duzib128G0444 Durio zibethinus HOM05D000568 ORTHO05D000628 2.4e-15 85.9 133 45.9
Sabra13G0077100 Salix brachista HOM05D000568 ORTHO05D000628 3.2e-15 85.5 134 46.3
Hund07338 Selenicereus undatus HOM05D000568 ORTHO05D000628 3.2e-15 85.5 131 46.6
Gohir.A08G224800 Gossypium hirsutum HOM05D000568 ORTHO05D000628 7.0e-15 84.3 130 43.1
Gohir.D08G245200 Gossypium hirsutum HOM05D000568 ORTHO05D000628 7.0e-15 84.3 130 43.1
Gorai.004G261700 Gossypium raimondii HOM05D000568 ORTHO05D000628 7.0e-15 84.3 130 43.1
CiPaw.07G079600 Carya illinoinensis HOM05D000568 ORTHO05D000628 9.2e-15 84.0 133 45.9
CANSAT54G1162 Cannabis sativa HOM05D000568 ORTHO05D000628 1.2e-14 83.6 133 47.4
Ciclev10011741m.g Citrus clementina HOM05D000568 ORTHO05D000628 1.2e-14 83.6 133 44.4
Nn1g09792 Nelumbo nucifera HOM05D000568 ORTHO05D000628 1.2e-14 83.6 133 46.6
PSO675G2685 Papaver somniferum HOM05D000568 ORTHO05D000628 1.2e-14 83.6 132 44.7
Manes.09G185200 Manihot esculenta HOM05D000568 ORTHO05D000628 1.6e-14 83.2 133 45.9
PSO017G3594 Papaver somniferum HOM05D000568 ORTHO05D000628 1.6e-14 83.2 132 44.7
Rhsim09G0129700 Rhododendron simsii HOM05D000568 ORTHO05D000628 1.6e-14 83.2 134 47.8
TAR392G0001 Trochodendron aralioides HOM05D000568 ORTHO05D000628 2.1e-14 82.8 135 45.2
Lj8A196T47 Lonicera japonica HOM05D000568 ORTHO05D000628 2.7e-14 82.4 136 47.8
Actinidia03829 Actinidia chinensis HOM05D000568 ORTHO05D000628 6.0e-14 81.3 134 46.3
Gohir.A05G391200 Gossypium hirsutum HOM05D000568 ORTHO05D000628 1.0e-13 80.5 133 42.9
vmacro10408 Vaccinium macrocarpon HOM05D000568 ORTHO05D000628 1.7e-13 79.7 133 45.9
CiPaw.08G115800 Carya illinoinensis HOM05D000568 ORTHO05D000628 2.3e-13 79.3 133 45.1
Gohir.D04G026000 Gossypium hirsutum HOM05D000568 ORTHO05D000628 2.3e-13 79.3 133 42.9
Gorai.012G028600 Gossypium raimondii HOM05D000568 ORTHO05D000628 2.3e-13 79.3 133 42.9
QL01p048758 Quercus lobata HOM05D000568 ORTHO05D000628 2.3e-13 79.3 133 45.9
Eucgr.B01407 Eucalyptus grandis HOM05D000568 ORTHO05D000628 3.0e-13 79.0 132 44.7
Gorai.013G179800 Gossypium raimondii HOM05D000568 ORTHO05D000628 3.0e-13 79.0 133 44.4
ECA238G1103 Erigeron canadensis HOM05D000568 ORTHO05D000628 5.1e-13 78.2 133 44.4
Ah.04g158860 Amaranthus hybridus HOM05D000568 ORTHO05D000628 6.6e-13 77.8 129 44.2
TWI36G0920 Tripterygium wilfordii HOM05D000568 ORTHO05D000628 6.6e-13 77.8 133 45.1
GSVIVG01019119001 Vitis vinifera HOM05D000568 ORTHO05D000628 8.6e-13 77.4 112 45.5
Gohir.D13G159100 Gossypium hirsutum HOM05D000568 ORTHO05D000628 1.1e-12 77.0 133 43.6
Ah.06g195520 Amaranthus hybridus HOM05D000568 ORTHO05D000628 1.9e-12 76.3 130 44.6
PGR119G1524 Punica granatum HOM05D000568 ORTHO05D000628 2.5e-12 75.9 133 42.9
Lj1g0006041 Lotus japonicus HOM05D000568 ORTHO05D000628 3.3e-12 75.5 129 38.0
Haze_04544 Corylus avellana HOM05D000568 ORTHO05D000628 4.3e-12 75.1 63 61.9
DCAR_031600 Daucus carota HOM05D000568 ORTHO05D000628 4.3e-12 75.1 135 45.9
Migut.F01877 Erythranthe guttata HOM05D000568 ORTHO05D000628 9.5e-12 73.9 128 43.8
Gohir.A13G154400 Gossypium hirsutum HOM05D000568 ORTHO05D000628 1.2e-11 73.6 133 42.1
ECA232G2670 Erigeron canadensis HOM05D000568 ORTHO05D000628 1.6e-11 73.2 135 39.3
Lalb_Chr21g0311441 Lupinus albus HOM05D000568 ORTHO05D000628 2.1e-11 72.8 133 36.1
Sc09g0001510 Simmondsia chinensis HOM05D000568 ORTHO05D000628 2.1e-11 72.8 132 43.2
arahy.Tifrunner.gnm1.ann1.MSPK9F Arachis hypogaea HOM05D000568 ORTHO05D000628 2.8e-11 72.4 129 38.0
arahy.Tifrunner.gnm1.ann1.ZG36KZ Arachis hypogaea HOM05D000568 ORTHO05D000628 2.8e-11 72.4 129 38.0
Thecc.05G200400 Theobroma cacao HOM05D000568 ORTHO05D000628 2.8e-11 72.4 133 42.9
Glyma.09G251200 Glycine max HOM05D000568 ORTHO05D000628 3.6e-11 72.0 129 38.0
HanXRQChr17g0559161 Helianthus annuus HOM05D000568 ORTHO05D000628 3.6e-11 72.0 134 42.5
VMungo1383G1432 Vigna mungo HOM05D000568 ORTHO05D000628 8.1e-11 70.9 129 37.2
Os11g0472000 Oryza sativa ssp. japonica HOM05D000568 ORTHO05D000628 1.1e-10 70.5 136 38.2
Psat3g103720 Pisum sativum HOM05D000568 ORTHO05D000628 1.1e-10 70.5 129 37.2
Glyma.10G170800 Glycine max HOM05D000568 ORTHO05D000628 1.4e-10 70.1 126 38.9
MSTRG.8215 Avicennia marina HOM05D000568 ORTHO05D000628 2.3e-10 69.3 128 42.2
VMungo0720G0170 Vigna mungo HOM05D000568 ORTHO05D000628 3.1e-10 68.9 133 36.1
Glyma.18G241300 Glycine max HOM05D000568 ORTHO05D000628 4.0e-10 68.6 129 36.4
Phvul.008G054800 Phaseolus vulgaris HOM05D000568 ORTHO05D000628 4.0e-10 68.6 129 36.4
Zm00001eb090510 Zea mays HOM05D000568 ORTHO05D000628 4.0e-10 68.6 135 40.0
COL.COLO4_27387 Corchorus olitorius HOM05D000568 ORTHO05D000628 5.2e-10 68.2 62 58.1
Lalb_Chr02g0149441 Lupinus albus HOM05D000568 ORTHO05D000628 6.8e-10 67.8 133 36.1
Ca_07974_v3 Cicer arietinum L. HOM05D000568 ORTHO05D000628 1.2e-09 67.0 118 37.3
Nitab4.5_0006333g0050 Nicotiana tabacum HOM05D000568 ORTHO05D000628 1.2e-09 67.0 45 86.7
Glyma.20G219100 Glycine max HOM05D000568 ORTHO05D000628 1.5e-09 66.6 133 36.8
Medtr7g079840 Medicago truncatula HOM05D000568 ORTHO05D000628 2.6e-09 65.9 126 36.5
Phvul.007G118500 Phaseolus vulgaris HOM05D000568 ORTHO05D000628 3.4e-09 65.5 133 35.3
Zm00001eb169920 Zea mays HOM05D000568 ORTHO05D000628 3.4e-09 65.5 136 41.2
TPR.G30345 Trifolium pratense HOM05D000568 ORTHO05D000628 4.4e-09 65.1 129 34.9
Os12g0405100 Oryza sativa ssp. japonica HOM05D000568 ORTHO05D000628 5.8e-09 64.7 136 37.5
MSTRG.325 Avicennia marina HOM05D000568 ORTHO05D000628 9.9e-09 63.9 128 41.4
Oeu062053.1 Olea europaea HOM05D000568 ORTHO05D000628 2.9e-08 62.4 122 42.6
SGA_v2.0_scaffold122G33175 Striga asiatica HOM05D000568 ORTHO05D000628 2.9e-08 62.4 128 38.3
SalBow6G1599 Salvia bowleyana HOM05D000568 ORTHO05D000628 6.4e-08 61.2 128 40.6
HanXRQChr02g0039631 Helianthus annuus HOM05D000568 ORTHO05D000628 1.1e-07 60.5 132 36.4
TWI75G1052 Tripterygium wilfordii HOM05D000568 ORTHO05D000628 1.1e-07 60.5 122 40.2
Zm00001eb143430 Zea mays HOM05D000568 ORTHO05D000628 1.1e-07 60.5 120 42.5
Oeu040497.1 Olea europaea HOM05D000568 ORTHO05D000628 1.4e-07 60.1 128 35.2
HPP92_003544 Vanilla planifolia HOM05D000568 ORTHO05D000628 1.4e-07 60.1 132 37.9
Os01g0917400 Oryza sativa ssp. japonica HOM05D000568 ORTHO05D000628 2.4e-07 59.3 134 38.1
PGR031G3440 Punica granatum HOM05D000568 ORTHO05D000628 3.2e-07 58.9 115 44.3
THA.LOC104802944 Tarenaya hassleriana HOM05D000568 ORTHO05D000628 3.2e-07 58.9 128 39.1
Zm00001eb364730 Zea mays HOM05D000568 ORTHO05D000628 3.2e-07 58.9 120 40.8
ATR0561G241 Amborella trichopoda HOM05D000568 ORTHO05D000628 4.1e-07 58.5 134 38.1
Lj5g0010452 Lotus japonicus HOM05D000568 ORTHO05D000628 4.6e-06 55.1 132 33.3


User provided reference genes

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