Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006590g0020 Nicotiana tabacum HOM05D004110 ORTHO05D004810 0.0e+00 1556.6 791 100.0
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 0.0e+00 1397.9 863 86.3
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 0.0e+00 1255.0 793 81.6
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 0.0e+00 1087.4 815 73.3
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 2.7e-301 1038.5 632 83.9
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 5.8e-288 994.2 786 65.4
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 5.4e-278 961.1 800 61.5
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 1.7e-271 939.5 803 60.6
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 4.1e-270 934.9 783 60.2
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 5.4e-270 934.5 797 60.4
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 1.3e-268 929.9 797 60.0
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 6.4e-263 911.0 779 59.3
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 1.1e-262 910.2 791 58.8
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 7.1e-262 907.5 793 59.0
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 6.0e-261 904.4 779 59.6
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 5.1e-260 901.4 778 59.1
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 1.9e-259 899.4 860 55.8
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 7.3e-259 897.5 781 59.5
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 7.3e-259 897.5 780 58.3
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 1.6e-258 896.3 780 58.5
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 1.1e-257 893.6 781 58.8
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 5.8e-256 887.9 781 58.8
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 5.8e-256 887.9 778 58.9
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 7.6e-256 887.5 778 60.0
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 9.9e-256 887.1 815 58.5
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 6.4e-255 884.4 780 59.1
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 7.1e-254 880.9 791 58.2
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 2.1e-253 879.4 806 57.6
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 6.0e-253 877.9 784 59.1
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 7.8e-253 877.5 783 59.1
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 2.3e-252 875.9 779 58.2
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.3e-252 875.9 779 58.2
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 1.5e-251 873.2 783 56.6
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.4e-249 866.7 781 57.6
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 3.1e-249 865.5 783 57.2
CAN.G603.2 Capsicum annuum HOM05D004110 ORTHO05D004810 4.0e-249 865.1 725 65.8
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 5.3e-249 864.8 781 57.6
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 6.4e-247 857.8 782 56.4
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 2.4e-246 855.9 784 56.2
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 5.4e-246 854.7 783 55.8
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 2.1e-245 852.8 849 53.6
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 7.9e-245 850.9 785 54.9
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 8.7e-244 847.4 784 56.2
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 2.5e-243 845.9 784 56.2
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 1.3e-242 843.6 783 55.7
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 1.3e-242 843.6 797 54.7
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 1.6e-242 843.2 777 56.8
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 4.8e-242 841.6 775 55.9
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 4.8e-242 841.6 797 54.7
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 8.1e-242 840.9 779 56.0
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 1.7e-239 833.2 783 57.2
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 4.9e-239 831.6 851 51.8
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 4.9e-239 831.6 851 51.8
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 6.4e-239 831.2 778 55.5
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 4.2e-238 828.6 783 55.3
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 3.5e-237 825.5 784 55.0
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 8.7e-236 820.8 783 54.5
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 2.5e-235 819.3 783 54.4
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 9.6e-235 817.4 779 54.4
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 2.1e-234 816.2 814 54.4
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 3.7e-234 815.5 786 54.2
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 1.4e-233 813.5 786 53.9
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 6.9e-233 811.2 795 54.0
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 4.5e-232 808.5 790 53.8
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 5.8e-232 808.1 779 53.8
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 1.3e-228 797.0 781 53.5
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 7.4e-227 791.2 783 52.5
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 1.6e-226 790.0 875 49.3
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 1.8e-225 786.6 789 51.2
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 1.8e-225 786.6 780 52.8
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 1.1e-222 777.3 811 50.2
vmacro17378 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 8.8e-220 767.7 608 63.2
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 2.2e-215 753.1 782 50.8
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 6.5e-215 751.5 810 50.4
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 1.8e-212 743.4 612 61.9
Haze_02194 Corylus avellana HOM05D004110 ORTHO05D004810 2.5e-206 723.0 663 57.3
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 6.7e-204 714.9 816 48.9
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 4.8e-202 708.8 601 61.6
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 1.8e-185 653.7 794 45.6
MD10G1119400 Malus domestica HOM05D004110 ORTHO05D004810 4.4e-179 632.5 592 55.9
Cpa.g.sc37.188 Carica papaya HOM05D004110 ORTHO05D004810 6.0e-168 595.5 475 62.1
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 7.3e-166 588.6 543 58.6
HPP92_005008 Vanilla planifolia HOM05D004110 ORTHO05D004810 9.9e-155 551.6 773 41.7
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 1.1e-148 531.6 797 40.5
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 7.6e-147 525.4 794 40.8
CDE05G0764 Ceratophyllum demersum HOM05D004110 ORTHO05D004810 1.4e-145 521.2 732 40.0
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 2.4e-145 520.4 797 37.9
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 4.8e-133 479.6 810 35.4
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 1.0e-119 435.3 821 33.0
Glyma.11G098551 Glycine max HOM05D004110 ORTHO05D004810 3.3e-118 430.3 333 61.9
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 3.1e-116 423.7 861 31.5
SHI05691 Sapria himalayana HOM05D004110 ORTHO05D004810 7.4e-110 402.5 501 44.9
CSS0003289 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 2.2e-77 294.7 193 71.0
ClCG02G011580 Citrullus lanatus HOM05D004110 ORTHO05D004810 2.1e-72 278.1 232 59.1
Cpa.g.sc37.187 Carica papaya HOM05D004110 ORTHO05D004810 2.7e-59 234.6 301 44.2
Duzib248G1214 Durio zibethinus HOM05D004110 ORTHO05D004810 1.7e-58 231.9 190 61.1
Solyc11g039890.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 4.3e-57 227.3 162 74.1
CBR_g5647 Chara braunii HOM05D004110 ORTHO05D004810 3.2e-44 184.5 829 24.1
Duzib248G0147 Durio zibethinus HOM05D004110 ORTHO05D004810 7.8e-43 179.9 189 54.0
vmacro17377 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 3.1e-39 167.9 182 51.1
CSS0015162 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 6.6e-34 150.2 104 73.1
MD10G1119100 Malus domestica HOM05D004110 ORTHO05D004810 9.6e-33 146.4 127 55.1
CSS0008861 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 4.2e-28 131.0 137 49.6
Hma1.2p1_0032F.1_g019640 Hydrangea macrophylla HOM05D004110 ORTHO05D004810 2.1e-27 128.6 100 65.0
COL.COLO4_17260 Corchorus olitorius HOM05D004110 ORTHO05D004810 7.8e-27 126.7 233 39.5
ClCG02G011550 Citrullus lanatus HOM05D004110 ORTHO05D004810 1.0e-26 126.3 144 49.3
COL.COLO4_17261 Corchorus olitorius HOM05D004110 ORTHO05D004810 2.3e-26 125.2 91 67.0
ClCG02G011590 Citrullus lanatus HOM05D004110 ORTHO05D004810 1.9e-25 122.1 92 59.8
Haze_02193 Corylus avellana HOM05D004110 ORTHO05D004810 4.2e-20 104.4 135 43.7
Gohir.A12G039250 Gossypium hirsutum HOM05D004110 ORTHO05D004810 5.4e-20 104.0 104 48.1
CSS0014003 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 4.6e-19 100.9 88 58.0
Zm00001eb026660 Zea mays HOM05D004110 ORTHO05D004810 7.9e-19 100.1 127 40.2
Os10g0154566 Oryza sativa ssp. japonica HOM05D004110 ORTHO05D004810 3.0e-18 98.2 127 44.1
arahy.Tifrunner.gnm1.ann1.G8A5JV Arachis hypogaea HOM05D004110 ORTHO05D004810 1.5e-17 95.9 87 51.7
BolC8t52466H Brassica oleracea HOM05D004110 ORTHO05D004810 2.8e-16 91.7 86 52.3
Psat1g093160 Pisum sativum HOM05D004110 ORTHO05D004810 8.1e-16 90.1 68 61.8
CSS0024884 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 2.0e-14 85.5 46 84.8
Ciclev10029869m.g Citrus clementina HOM05D004110 ORTHO05D004810 2.2e-13 82.0 50 68.0
Zm00001eb026650 Zea mays HOM05D004110 ORTHO05D004810 1.6e-11 75.9 122 40.2
VMungo0464G1786 Vigna mungo HOM05D004110 ORTHO05D004810 5.1e-10 70.9 57 56.1
CBR_g66117 Chara braunii HOM05D000019 ORTHO05D001702 6.7e-10 70.5 106 34.9
AagrBONN_evm.TU.Sc2ySwM_344.4149 Anthoceros agrestis HOM05D004110 ORTHO05D004810 1.5e-09 69.3 156 27.6
Duzib248G0615 Durio zibethinus HOM05D004110 ORTHO05D004810 5.6e-09 67.4 174 31.0
SHI05692 Sapria himalayana HOM05D004110 ORTHO05D004810 5.6e-09 67.4 69 46.4
HanXRQChr09g0252681 Helianthus annuus HOM05D004110 ORTHO05D004810 9.6e-09 66.6 59 52.5


User provided reference genes

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