Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006590g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 0.0e+00 2138.2 1087 100.0
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 0.0e+00 2030.0 1134 92.1
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 0.0e+00 1745.7 1093 81.6
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 0.0e+00 1742.2 1087 81.5
CAN.G603.1 Capsicum annuum HOM05D004110 ORTHO05D004810 0.0e+00 1683.7 1088 79.7
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 0.0e+00 1207.2 1052 63.5
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 0.0e+00 1142.5 1093 57.0
CSS0024884 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 0.0e+00 1092.4 1093 54.7
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 0.0e+00 1088.9 1091 53.6
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 5.2e-311 1071.2 1086 53.5
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 1.6e-304 1049.7 1090 51.6
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 3.1e-300 1035.4 1096 51.9
vmacro17377 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 1.5e-299 1033.1 1100 51.9
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 2.6e-299 1032.3 1090 52.8
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 7.1e-289 997.7 1095 50.0
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 3.9e-287 991.9 1090 50.3
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 9.0e-284 980.7 1088 49.8
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 1.2e-283 980.3 1095 49.2
Duzib248G0147 Durio zibethinus HOM05D004110 ORTHO05D004810 2.0e-283 979.5 1084 48.7
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 5.9e-283 978.0 1084 48.2
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 1.3e-282 976.9 1090 49.2
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 1.7e-282 976.5 1083 50.0
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 1.4e-281 973.4 1084 48.1
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 1.6e-280 969.9 1090 48.5
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 6.7e-279 964.5 1084 47.7
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 8.8e-279 964.1 1087 48.1
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 4.3e-278 961.8 1095 47.9
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 1.1e-276 957.2 1091 48.5
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 1.8e-276 956.4 1080 47.8
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 5.5e-273 944.9 1087 48.4
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 4.7e-272 941.8 1095 46.8
Haze_02193 Corylus avellana HOM05D004110 ORTHO05D004810 1.5e-270 936.8 1090 47.5
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 9.7e-270 934.1 1098 48.4
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 4.8e-269 931.8 1102 48.4
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 6.3e-269 931.4 1095 48.2
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 3.1e-268 929.1 1107 46.7
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 2.5e-265 919.5 1097 47.3
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 4.2e-265 918.7 1097 47.0
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 4.7e-264 915.2 1097 46.9
Cpa.g.sc37.187 Carica papaya HOM05D004110 ORTHO05D004810 1.8e-263 913.3 1038 48.7
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 9.1e-260 901.0 1092 46.2
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 1.3e-258 897.1 1091 46.5
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 8.5e-258 894.4 1087 46.7
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 2.1e-256 889.8 1095 47.5
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 3.6e-256 889.0 1085 46.6
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 2.0e-254 883.2 1102 45.0
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 6.3e-253 878.2 1090 45.8
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 1.4e-252 877.1 1090 45.8
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 1.8e-252 876.7 1097 44.7
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 5.4e-252 875.2 1091 45.6
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.9e-249 866.7 1028 47.3
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 6.1e-248 861.7 1098 44.8
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 3.0e-247 859.4 1092 45.8
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 5.2e-247 858.6 1089 44.2
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 1.5e-246 857.1 1097 44.1
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 1.1e-244 850.9 1084 44.7
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 1.4e-244 850.5 1096 44.2
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 2.4e-244 849.7 1095 44.8
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 9.1e-244 847.8 1090 45.0
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 3.5e-243 845.9 1091 43.4
AUR62010090 Chenopodium quinoa HOM05D004110 ORTHO05D004810 5.0e-242 842.0 1086 44.6
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 1.9e-241 840.1 1089 44.7
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 8.9e-239 831.2 1094 43.7
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 8.3e-237 824.7 1080 43.2
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 1.4e-236 823.9 1093 42.8
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 4.1e-236 822.4 1111 42.1
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 5.4e-236 822.0 1079 42.1
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 2.0e-235 820.1 1118 42.7
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 5.9e-235 818.5 1079 42.6
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 1.0e-234 817.8 1112 43.3
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 1.0e-234 817.8 1088 43.0
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 2.5e-233 813.1 1092 42.9
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 2.5e-233 813.1 990 47.0
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 8.0e-232 808.1 1079 42.1
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 4.0e-231 805.8 1088 42.6
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 1.2e-230 804.3 1086 42.4
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 1.2e-230 804.3 1086 42.4
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 9.8e-230 801.2 1088 42.5
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 9.2e-228 794.7 1086 43.4
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 1.7e-226 790.4 1101 42.1
MELO3C020789.2 Cucumis melo HOM05D004110 ORTHO05D004810 9.5e-225 784.6 1020 42.7
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 9.5e-225 784.6 1058 42.0
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 1.2e-203 714.5 1078 39.9
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 7.6e-198 695.3 1088 40.2
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 6.2e-192 675.6 1086 38.7
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 4.9e-189 666.0 1105 38.6
ClCG02G011600 Citrullus lanatus HOM05D004110 ORTHO05D004810 2.8e-184 650.2 747 46.6
CARHR294450 Cardamine hirsuta HOM05D004110 ORTHO05D004810 2.7e-179 633.6 738 45.9
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 4.6e-179 632.9 912 41.7
Zm00001eb026650 Zea mays HOM05D004110 ORTHO05D004810 4.0e-146 523.5 1089 33.4
Potri.004G168700 Populus trichocarpa HOM05D004110 ORTHO05D004810 1.4e-143 515.0 795 41.9
FAN27G1057 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.2e-131 475.3 540 49.6
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 1.8e-114 418.3 1158 28.2
COL.COLO4_17262 Corchorus olitorius HOM05D004110 ORTHO05D004810 5.2e-114 416.8 772 35.1
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 2.0e-113 414.8 1156 27.9
Glyma.11G098600 Glycine max HOM05D004110 ORTHO05D004810 7.3e-108 396.4 417 53.2
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 9.5e-108 396.0 1005 27.5
MD10G1119600 Malus domestica HOM05D004110 ORTHO05D004810 7.1e-103 379.8 391 50.1
SHI05701 Sapria himalayana HOM05D004110 ORTHO05D004810 6.0e-102 376.7 606 39.1
SEGI_22669 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 2.3e-101 374.8 740 33.8
Os10g0154600 Oryza sativa ssp. japonica HOM05D004110 ORTHO05D004810 4.1e-95 354.0 658 35.7
HPP92_005015 Vanilla planifolia HOM05D004110 ORTHO05D004810 2.7e-78 298.1 647 31.7
CBR_g5647 Chara braunii HOM05D004110 ORTHO05D004810 6.2e-75 287.0 1254 23.8
SMO171G0108 Selaginella moellendorffii HOM05D004110 ORTHO05D004810 2.3e-53 215.3 479 28.4
MD10G1119500 Malus domestica HOM05D004110 ORTHO05D004810 5.7e-44 184.1 208 48.6
FAN27G2584 Fragaria x ananassa HOM05D004110 ORTHO05D004810 8.5e-40 170.2 138 61.6
SEGI_07180 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 5.7e-36 157.5 397 30.2
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 9.7e-28 130.2 294 31.6
PGSC0003DMG400022052 Solanum tuberosum HOM05D004110 ORTHO05D004810 4.2e-23 114.8 67 83.6
Lj3g0004699 Lotus japonicus HOM05D004110 ORTHO05D004810 1.4e-21 109.8 152 41.4
SHI05700 Sapria himalayana HOM05D004110 ORTHO05D004810 8.3e-19 100.5 122 41.8
AUR62040642 Chenopodium quinoa HOM05D004110 ORTHO05D004810 1.1e-18 100.1 112 46.4
HPP92_005007 Vanilla planifolia HOM05D004110 ORTHO05D004810 1.8e-18 99.4 291 28.5
BcaB03g12223 Brassica carinata HOM05D004110 ORTHO05D004810 8.8e-13 80.5 118 41.5
SHI05699 Sapria himalayana HOM05D004110 ORTHO05D004810 3.6e-06 58.5 151 29.1


User provided reference genes

Program Settings