Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006196g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.9e-47 192.2 99 100.0
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 3.2e-10 68.6 42 81.0
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 3.2e-10 68.6 42 81.0
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 3.2e-10 68.6 42 81.0
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 3.2e-10 68.6 42 81.0
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.2e-10 68.6 42 81.0
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 4.1e-10 68.2 46 73.9
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 4.1e-10 68.2 42 81.0
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 9.2e-10 67.0 42 78.6
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 1.6e-09 66.2 42 78.6
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 1.6e-09 66.2 46 71.7
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 1.6e-09 66.2 46 71.7
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 1.6e-09 66.2 46 71.7
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 1.6e-09 66.2 42 78.6
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 2.1e-09 65.9 46 71.7
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 2.7e-09 65.5 46 71.7
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 2.7e-09 65.5 42 76.2
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 3.5e-09 65.1 71 54.9
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 3.5e-09 65.1 44 75.0
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 4.6e-09 64.7 59 59.3
TPR.G36113 Trifolium pratense HOM05D003517 ORTHO05D009798 4.6e-09 64.7 41 78.0
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 7.8e-09 63.9 37 86.5
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 7.8e-09 63.9 37 86.5
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 7.8e-09 63.9 37 86.5
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 7.8e-09 63.9 37 86.5
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 7.8e-09 63.9 37 86.5
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 7.8e-09 63.9 37 86.5
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 7.8e-09 63.9 71 53.5
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 7.8e-09 63.9 42 76.2
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 7.8e-09 63.9 42 76.2
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 1.0e-08 63.5 41 78.0
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 1.0e-08 63.5 42 73.8
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 1.3e-08 63.2 41 75.6
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 1.3e-08 63.2 41 75.6
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 1.3e-08 63.2 41 75.6
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 1.3e-08 63.2 41 75.6
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.3e-08 63.2 46 69.6
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 5.1e-08 61.2 42 71.4
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 6.6e-08 60.8 34 88.2
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 8.6e-08 60.5 46 67.4
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 4.3e-07 58.2 39 76.9
Nitab4.5_0003945g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.6e-07 57.8 65 49.2
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 7.3e-07 57.4 46 65.2
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 1.2e-06 56.6 36 77.8
Lalb_Chr22g0353791 Lupinus albus HOM05D003517 ORTHO05D009798 1.2e-06 56.6 35 77.1
Zm00001eb438110 Zea mays HOM05D003517 ORTHO05D009798 1.6e-06 56.2 35 77.1
Zm00001eb438970 Zea mays HOM05D003517 ORTHO05D009798 1.6e-06 56.2 35 77.1
Zm00001eb439050 Zea mays HOM05D003517 ORTHO05D009798 1.6e-06 56.2 35 77.1
Zm00001eb440630 Zea mays HOM05D003517 ORTHO05D009798 1.6e-06 56.2 35 77.1
Solyc11g030935.1 Solanum lycopersicum HOM05D003517 ORTHO05D009798 4.7e-06 54.7 64 48.4
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 6.2e-06 54.3 45 66.7
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 8.1e-06 53.9 37 70.3
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 8.1e-06 53.9 35 74.3


User provided reference genes

Program Settings