Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006173g0010 Nicotiana tabacum HOM05D006201 ORTHO05D007178 0.0e+00 1807.7 923 100.0
Nitab4.5_0003493g0040 Nicotiana tabacum HOM05D006201 ORTHO05D007178 0.0e+00 1684.8 925 93.4
PGSC0003DMG400026051 Solanum tuberosum HOM05D006201 ORTHO05D007178 0.0e+00 1439.9 940 80.6
Sopen01g036050 Solanum pennellii HOM05D006201 ORTHO05D007178 0.0e+00 1401.7 940 78.9
Solyc01g090260.5.1 Solanum lycopersicum HOM05D006201 ORTHO05D007178 1.8e-309 1065.8 697 79.8
CAN.G1473.10 Capsicum annuum HOM05D006201 ORTHO05D007178 2.6e-300 1035.4 641 81.6
MSTRG.5539 Avicennia marina HOM05D006201 ORTHO05D007178 6.6e-235 818.1 933 49.1
Rhsim05G0225800 Rhododendron simsii HOM05D006201 ORTHO05D007178 4.0e-232 808.9 947 47.1
Lj2C67G1 Lonicera japonica HOM05D006201 ORTHO05D007178 1.3e-230 803.9 912 49.8
vmacro20327 Vaccinium macrocarpon HOM05D006201 ORTHO05D007178 2.2e-230 803.1 952 47.5
Oeu020418.1 Olea europaea HOM05D006201 ORTHO05D007178 2.5e-226 789.6 911 48.3
Cc06_g00730 Coffea canephora HOM05D006201 ORTHO05D007178 4.3e-226 788.9 915 49.4
Actinidia11549 Actinidia chinensis HOM05D006201 ORTHO05D007178 3.4e-223 779.2 928 48.0
Cfa017112 Carpinus fangiana HOM05D006201 ORTHO05D007178 1.2e-220 770.8 932 48.4
Haze_21088 Corylus avellana HOM05D006201 ORTHO05D007178 6.9e-216 755.0 949 47.0
Migut.J00094 Erythranthe guttata HOM05D006201 ORTHO05D007178 1.4e-213 747.3 923 46.7
Thecc.05G006600 Theobroma cacao HOM05D006201 ORTHO05D007178 9.3e-213 744.6 934 45.8
Prupe.6G285000 Prunus persica HOM05D006201 ORTHO05D007178 4.3e-210 735.7 947 46.3
CiPaw.09G215500 Carya illinoinensis HOM05D006201 ORTHO05D007178 1.3e-209 734.2 934 46.1
Manes.09G111900 Manihot esculenta HOM05D006201 ORTHO05D007178 1.5e-207 727.2 945 44.6
QL07p033902 Quercus lobata HOM05D006201 ORTHO05D007178 9.9e-207 724.5 950 45.3
Ciclev10024812m.g Citrus clementina HOM05D006201 ORTHO05D007178 1.3e-203 714.1 945 43.1
Gorai.012G119200 Gossypium raimondii HOM05D006201 ORTHO05D007178 5.1e-203 712.2 937 44.7
Gohir.A04G095500 Gossypium hirsutum HOM05D006201 ORTHO05D007178 5.6e-202 708.8 938 44.2
MD04G1166800 Malus domestica HOM05D006201 ORTHO05D007178 8.1e-201 704.9 938 45.2
Sabra16G0130900 Salix brachista HOM05D006201 ORTHO05D007178 2.4e-200 703.4 951 43.8
TWI77G1003 Tripterygium wilfordii HOM05D006201 ORTHO05D007178 2.4e-197 693.3 929 44.8
Duzib093G1324 Durio zibethinus HOM05D006201 ORTHO05D007178 6.0e-196 688.7 941 43.4
Lsat_1_v5_gn_5_149661 Lactuca sativa HOM05D006201 ORTHO05D007178 1.9e-194 683.7 925 43.4
HanXRQChr12g0375461 Helianthus annuus HOM05D006201 ORTHO05D007178 2.6e-191 673.3 911 44.1
CANSAT35G1627 Cannabis sativa HOM05D006201 ORTHO05D007178 4.5e-191 672.5 937 43.4
SGA_v2.0_scaffold85G26680 Striga asiatica HOM05D006201 ORTHO05D007178 2.5e-189 666.8 942 44.4
Cpa.g.sc861.1 Carica papaya HOM05D006201 ORTHO05D007178 1.2e-188 664.5 934 42.4
DCAR_023994 Daucus carota HOM05D006201 ORTHO05D007178 4.6e-188 662.5 938 42.4
FAN05G0393 Fragaria x ananassa HOM05D006201 ORTHO05D007178 5.7e-186 655.6 917 42.9
FAN05G0066 Fragaria x ananassa HOM05D006201 ORTHO05D007178 2.1e-185 653.7 917 42.7
PGR004G1794 Punica granatum HOM05D006201 ORTHO05D007178 1.8e-184 650.6 927 42.9
Aqoxy1G01280 Aquilegia oxysepala HOM05D006201 ORTHO05D007178 1.8e-179 634.0 938 39.7
Psat3g124360 Pisum sativum HOM05D006201 ORTHO05D007178 1.9e-178 630.6 917 42.5
Medtr7g070280 Medicago truncatula HOM05D006201 ORTHO05D007178 2.5e-178 630.2 909 42.2
TPR.G6637 Trifolium pratense HOM05D006201 ORTHO05D007178 9.1e-176 621.7 912 42.9
VMungo1383G1579 Vigna mungo HOM05D006201 ORTHO05D007178 8.5e-174 615.1 931 41.4
CsaV3_1G013180 Cucumis sativus L. HOM05D006201 ORTHO05D007178 1.9e-173 614.0 819 43.2
ClCG03G002510 Citrullus lanatus HOM05D006201 ORTHO05D007178 9.4e-173 611.7 817 42.4
FAN14G5119 Fragaria x ananassa HOM05D006201 ORTHO05D007178 3.6e-172 609.8 965 39.7
Lalb_Chr01g0023361 Lupinus albus HOM05D006201 ORTHO05D007178 6.1e-172 609.0 909 40.3
PSO017G2042 Papaver somniferum HOM05D006201 ORTHO05D007178 6.1e-172 609.0 931 40.7
CSS0012693 Camellia sinensis var. sinensis HOM05D006201 ORTHO05D007178 1.5e-170 604.4 681 51.1
PSO349G0155 Papaver somniferum HOM05D006201 ORTHO05D007178 2.2e-169 600.5 945 39.8
Sc22g0002850 Simmondsia chinensis HOM05D006201 ORTHO05D007178 6.9e-168 595.5 925 39.8
COL.COLO4_14449 Corchorus olitorius HOM05D006201 ORTHO05D007178 1.0e-166 591.7 821 43.7
Sed0013207 Sechium edule HOM05D006201 ORTHO05D007178 3.8e-166 589.7 816 41.8
Glyma.07G156700 Glycine max HOM05D006201 ORTHO05D007178 2.1e-164 583.9 911 41.2
FAN02G1356 Fragaria x ananassa HOM05D006201 ORTHO05D007178 1.0e-163 581.6 917 39.5
EL10Ac5g12480 Beta vulgaris HOM05D006201 ORTHO05D007178 1.4e-163 581.3 936 40.1
AUR62036404 Chenopodium quinoa HOM05D006201 ORTHO05D007178 2.8e-161 573.5 932 38.6
Lj1g0025030 Lotus japonicus HOM05D006201 ORTHO05D007178 1.1e-160 571.6 915 40.1
Aa31LG5G18800 Aethionema arabicum HOM05D006201 ORTHO05D007178 2.6e-159 567.0 942 36.5
MELO3C004988.2 Cucumis melo HOM05D006201 ORTHO05D007178 1.7e-158 564.3 819 40.3
THA.LOC104823304 Tarenaya hassleriana HOM05D006201 ORTHO05D007178 3.6e-156 556.6 928 37.3
Gohir.D04G135400 Gossypium hirsutum HOM05D006201 ORTHO05D007178 4.7e-156 556.2 715 44.2
Sp3g07220 Schrenkiella parvula HOM05D006201 ORTHO05D007178 4.7e-156 556.2 936 37.8
Ah.12g059100 Amaranthus hybridus HOM05D006201 ORTHO05D007178 6.1e-156 555.8 913 39.0
BolC5t34557H Brassica oleracea HOM05D006201 ORTHO05D007178 8.0e-156 555.4 909 38.1
AL3G19800 Arabidopsis lyrata HOM05D006201 ORTHO05D007178 1.8e-155 554.3 942 37.2
C05p59050 Brassica napus HOM05D006201 ORTHO05D007178 2.3e-155 553.9 909 38.1
A05p40010 Brassica napus HOM05D006201 ORTHO05D007178 5.2e-155 552.7 909 38.4
BraA05t22910Z Brassica rapa HOM05D006201 ORTHO05D007178 6.7e-155 552.4 914 38.3
MBI09_g02137_MAGBIO Magnolia biondii HOM05D006201 ORTHO05D007178 4.8e-153 546.2 928 39.0
Carub.0003s0793 Capsella rubella HOM05D006201 ORTHO05D007178 1.8e-152 544.3 932 37.2
CARHR083120 Cardamine hirsuta HOM05D006201 ORTHO05D007178 2.4e-152 543.9 938 37.4
GSVIVG01030267001 Vitis vinifera HOM05D006201 ORTHO05D007178 9.1e-152 542.0 686 48.3
Thhalv10022535m.g Eutrema salsugineum HOM05D006201 ORTHO05D007178 6.5e-150 535.8 933 36.8
BcaC05g29618 Brassica carinata HOM05D006201 ORTHO05D007178 1.2e-148 531.6 903 36.5
FvH4_6g10600 Fragaria vesca HOM05D006201 ORTHO05D007178 2.1e-148 530.8 688 43.9
Dinv12171 Davidia involucrata HOM05D006201 ORTHO05D007178 2.8e-145 520.4 553 48.5
unitig_578.g15909 Utricularia gibba HOM05D006201 ORTHO05D007178 2.7e-143 513.8 924 36.8
RcHm_v2.0_Chr3g0461591 Rosa chinensis HOM05D006201 ORTHO05D007178 8.6e-142 508.8 666 44.1
Peaxi162Scf00028g00419 Petunia axillaris HOM05D006201 ORTHO05D007178 1.8e-139 501.1 426 67.1
AUR62030757 Chenopodium quinoa HOM05D006201 ORTHO05D007178 7.5e-138 495.7 801 37.6
TAR623G1020 Trochodendron aralioides HOM05D006201 ORTHO05D007178 1.3e-137 495.0 545 51.4
Peaxi162Scf00028g00413 Petunia axillaris HOM05D006201 ORTHO05D007178 3.7e-137 493.4 370 69.5
ECA248G2923 Erigeron canadensis HOM05D006201 ORTHO05D007178 7.0e-136 489.2 1146 30.7
arahy.Tifrunner.gnm1.ann1.WUZ318 Arachis hypogaea HOM05D006201 ORTHO05D007178 1.6e-132 478.0 944 35.2
arahy.Tifrunner.gnm1.ann1.0N3F9M Arachis hypogaea HOM05D006201 ORTHO05D007178 3.4e-130 470.3 939 34.8
Eucgr.K02944 Eucalyptus grandis HOM05D006201 ORTHO05D007178 5.6e-125 453.0 680 40.1
AUR62044474 Chenopodium quinoa HOM05D006201 ORTHO05D007178 6.4e-121 439.5 808 35.4
Nn4g22431 Nelumbo nucifera HOM05D006201 ORTHO05D007178 2.0e-119 434.5 630 42.5
Atru.chr8.2337 Acer truncatum HOM05D006201 ORTHO05D007178 2.5e-117 427.6 485 49.7
Ca_07697_v3 Cicer arietinum L. HOM05D006201 ORTHO05D007178 1.8e-115 421.4 703 39.3
AT3G08800 Arabidopsis thaliana HOM05D006201 ORTHO05D007178 6.8e-107 392.9 637 40.5
Dinv12170 Davidia involucrata HOM05D006201 ORTHO05D007178 2.4e-99 367.9 359 61.3
Zm00001eb012870 Zea mays HOM05D006201 ORTHO05D007178 2.2e-97 361.3 772 33.4
Phvul.008G092200 Phaseolus vulgaris HOM05D006201 ORTHO05D007178 1.8e-91 341.7 474 43.7
Potri.016G127500 Populus trichocarpa HOM05D006201 ORTHO05D007178 2.0e-90 338.2 501 39.3
Rhsim05G0226000 Rhododendron simsii HOM05D006201 ORTHO05D007178 3.5e-87 327.4 493 39.1
HPP92_025099 Vanilla planifolia HOM05D006201 ORTHO05D007178 1.2e-82 312.4 704 31.4
Hund14937 Selenicereus undatus HOM05D006201 ORTHO05D007178 5.8e-82 310.1 382 47.1
CDE04G1687 Ceratophyllum demersum HOM05D006201 ORTHO05D007178 7.9e-79 299.7 923 28.1
Hma1.2p1_0479F.1_g161690 Hydrangea macrophylla HOM05D006201 ORTHO05D007178 3.0e-70 271.2 346 41.0
CAN.G1473.9 Capsicum annuum HOM05D006201 ORTHO05D007178 4.3e-69 267.3 211 71.1
Mapoly0011s0138 Marchantia polymorpha HOM05D006201 ORTHO05D007178 2.7e-63 248.1 823 28.2
ClCG10G022450 Citrullus lanatus HOM05D006201 ORTHO05D007178 4.3e-61 240.7 592 30.4
Hund14942 Selenicereus undatus HOM05D006201 ORTHO05D007178 1.1e-56 226.1 465 31.8
TAR623G1438 Trochodendron aralioides HOM05D006201 ORTHO05D007178 6.7e-54 216.9 252 46.0
ATR0605G352 Amborella trichopoda HOM05D006201 ORTHO05D007178 5.5e-48 197.2 310 39.0
Pp3c1_35690 Physcomitrium patens HOM05D006201 ORTHO05D007178 7.7e-42 176.8 382 31.9
AagrBONN_evm.TU.Sc2ySwM_344.1123 Anthoceros agrestis HOM05D006201 ORTHO05D007178 1.0e-41 176.4 362 32.0
ATR0605G310 Amborella trichopoda HOM05D006201 ORTHO05D007178 1.6e-34 152.5 348 30.7
SEGI_17367 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 1.5e-32 146.0 213 39.4
RcHm_v2.0_Chr3g0461601 Rosa chinensis HOM05D006201 ORTHO05D007178 2.1e-31 142.1 236 41.1
CANSAT64G1736 Cannabis sativa HOM05D006201 ORTHO05D007178 5.0e-25 120.9 121 52.1
SEGI_30477 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 4.7e-23 114.4 246 28.5
SMO351G0194 Selaginella moellendorffii HOM05D006201 ORTHO05D007178 2.1e-15 89.0 351 25.1
CARHR220410 Cardamine hirsuta HOM05D006201 ORTHO05D007178 2.3e-14 85.5 140 34.3
Nn2g13629 Nelumbo nucifera HOM05D001630 ORTHO05D007178 1.2e-10 73.2 85 42.4
Rhsim05G0225900 Rhododendron simsii HOM05D006201 ORTHO05D007178 2.0e-10 72.4 90 45.6
HPP92_025098 Vanilla planifolia HOM05D006201 ORTHO05D007178 3.3e-08 65.1 254 28.0
CBR_g8780 Chara braunii HOM05D006201 ORTHO05D007178 1.6e-07 62.8 309 23.3


User provided reference genes

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