Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006119g0010 Nicotiana tabacum HOM05D001533 ORTHO05D005122 1.2e-157 560.1 344 100.0
Nitab4.5_0000438g0040 Nicotiana tabacum HOM05D001533 ORTHO05D005122 4.3e-139 498.4 318 86.8
Peaxi162Scf00034g00264 Petunia axillaris HOM05D001533 ORTHO05D005122 4.0e-137 491.9 341 84.2
CAN.G893.6 Capsicum annuum HOM05D001533 ORTHO05D005122 9.9e-136 487.3 341 79.2
Nitab4.5_0006286g0040 Nicotiana tabacum HOM05D001533 ORTHO05D005122 8.7e-132 474.2 341 77.1
Solyc03g033580.3 Solanum lycopersicum HOM05D001533 ORTHO05D005122 8.7e-132 474.2 341 78.0
Peaxi162Scf00083g00714 Petunia axillaris HOM05D001533 ORTHO05D005122 1.1e-131 473.8 341 76.2
Sopen03g006360 Solanum pennellii HOM05D001533 ORTHO05D005122 1.3e-130 470.3 341 77.4
CAN.G1671.6 Capsicum annuum HOM05D001533 ORTHO05D005122 1.0e-127 460.7 341 75.7
Solyc02g083990.3 Solanum lycopersicum HOM05D001533 ORTHO05D005122 4.9e-127 458.4 341 75.1
Sopen02g028790 Solanum pennellii HOM05D001533 ORTHO05D005122 9.3e-126 454.1 341 74.2
Cc00_g26600 Coffea canephora HOM05D001533 ORTHO05D005122 1.9e-123 446.4 341 70.4
Dinv33621 Davidia involucrata HOM05D001533 ORTHO05D005122 5.7e-123 444.9 341 76.0
Actinidia31002 Actinidia chinensis HOM05D001533 ORTHO05D005122 1.8e-121 439.9 341 69.8
TAR381G0830 Trochodendron aralioides HOM05D001533 ORTHO05D005122 3.1e-121 439.1 341 69.2
Thecc.01G020200 Theobroma cacao HOM05D001533 ORTHO05D005122 6.9e-121 438.0 341 70.7
Ciclev10025997m.g Citrus clementina HOM05D001533 ORTHO05D005122 5.8e-120 434.9 341 69.8
COL.COLO4_21923 Corchorus olitorius HOM05D001533 ORTHO05D005122 1.0e-119 434.1 342 70.8
Gorai.003G010300 Gossypium raimondii HOM05D001533 ORTHO05D005122 8.4e-119 431.0 341 76.8
Cpa.g.sc6.238 Carica papaya HOM05D001533 ORTHO05D005122 3.2e-118 429.1 341 67.4
Gohir.A02G170000 Gossypium hirsutum HOM05D001533 ORTHO05D005122 3.2e-118 429.1 341 76.5
Hma1.2p1_0743F.1_g211570 Hydrangea macrophylla HOM05D001533 ORTHO05D005122 3.2e-118 429.1 341 78.6
Manes.01G145100 Manihot esculenta HOM05D001533 ORTHO05D005122 3.2e-118 429.1 341 68.3
Nn6g32353 Nelumbo nucifera HOM05D001533 ORTHO05D005122 1.6e-117 426.8 339 68.4
Cfa006964 Carpinus fangiana HOM05D001533 ORTHO05D005122 4.6e-117 425.2 335 68.7
MD02G1133400 Malus domestica HOM05D001533 ORTHO05D005122 7.9e-117 424.5 341 67.2
QL06p033501 Quercus lobata HOM05D001533 ORTHO05D005122 7.9e-117 424.5 341 69.2
TWI53G2031 Tripterygium wilfordii HOM05D001533 ORTHO05D005122 1.0e-116 424.1 341 68.6
Duzib187G1725 Durio zibethinus HOM05D001533 ORTHO05D005122 2.3e-116 422.9 343 69.1
Prupe.7G167200 Prunus persica HOM05D001533 ORTHO05D005122 5.1e-116 421.8 341 67.2
Haze_03774 Corylus avellana HOM05D001533 ORTHO05D005122 6.7e-116 421.4 335 68.4
TWI09G0584 Tripterygium wilfordii HOM05D001533 ORTHO05D005122 3.3e-115 419.1 341 67.2
Potri.007G012600 Populus trichocarpa HOM05D001533 ORTHO05D005122 9.7e-115 417.5 339 68.7
Rhsim08G0034200 Rhododendron simsii HOM05D001533 ORTHO05D005122 1.3e-114 417.2 341 66.0
CiPaw.08G132200 Carya illinoinensis HOM05D001533 ORTHO05D005122 4.8e-114 415.2 343 65.6
CiPaw.07G057700 Carya illinoinensis HOM05D001533 ORTHO05D005122 8.2e-114 414.5 337 65.9
vmacro18418 Vaccinium macrocarpon HOM05D001533 ORTHO05D005122 1.1e-113 414.1 341 65.1
SGA_v2.0_scaffold137G35090 Striga asiatica HOM05D001533 ORTHO05D005122 1.4e-113 413.7 341 70.7
Potri.005G115500 Populus trichocarpa HOM05D001533 ORTHO05D005122 4.1e-113 412.1 339 67.8
Manes.02G103600 Manihot esculenta HOM05D001533 ORTHO05D005122 5.3e-113 411.8 341 74.2
Lj4g0002557 Lotus japonicus HOM05D001533 ORTHO05D005122 2.0e-112 409.8 341 63.9
Duzib264G0112 Durio zibethinus HOM05D001533 ORTHO05D005122 4.5e-112 408.7 341 74.5
RcHm_v2.0_Chr2g0099581 Rosa chinensis HOM05D001533 ORTHO05D005122 4.5e-112 408.7 341 66.6
MELO3C016393.2 Cucumis melo HOM05D001533 ORTHO05D005122 1.7e-111 406.8 341 65.7
Oeu035307.1 Olea europaea HOM05D001533 ORTHO05D005122 1.7e-111 406.8 340 75.9
Sabra05G0094600 Salix brachista HOM05D001533 ORTHO05D005122 6.5e-111 404.8 368 63.3
FvH4_1g11960 Fragaria vesca HOM05D001533 ORTHO05D005122 8.5e-111 404.4 341 66.0
Glyma.02G049100 Glycine max HOM05D001533 ORTHO05D005122 1.1e-110 404.1 341 66.0
Gohir.D03G010000 Gossypium hirsutum HOM05D001533 ORTHO05D005122 1.4e-110 403.7 341 73.3
MSTRG.2705 Avicennia marina HOM05D001533 ORTHO05D005122 2.5e-110 402.9 315 75.9
FAN19G0503 Fragaria x ananassa HOM05D001533 ORTHO05D005122 2.5e-110 402.9 341 65.7
Glyma.16G129200 Glycine max HOM05D001533 ORTHO05D005122 2.5e-110 402.9 341 69.8
SalBow3G3323 Salvia bowleyana HOM05D001533 ORTHO05D005122 2.5e-110 402.9 390 59.7
CsaV3_4G005560 Cucumis sativus L. HOM05D001533 ORTHO05D005122 4.2e-110 402.1 341 65.1
ClCG07G008590 Citrullus lanatus HOM05D001533 ORTHO05D005122 7.2e-110 401.4 335 66.0
FAN26G0519 Fragaria x ananassa HOM05D001533 ORTHO05D005122 7.2e-110 401.4 341 65.4
FAN23G2041 Fragaria x ananassa HOM05D001533 ORTHO05D005122 9.4e-110 401.0 341 65.4
FAN28G1062 Fragaria x ananassa HOM05D001533 ORTHO05D005122 9.4e-110 401.0 341 65.4
Gohir.A11G176200 Gossypium hirsutum HOM05D001533 ORTHO05D005122 9.4e-110 401.0 340 73.2
Atru.chr3.790 Acer truncatum HOM05D001533 ORTHO05D005122 2.1e-109 399.8 341 74.5
VMungo0251G1454 Vigna mungo HOM05D001533 ORTHO05D005122 2.3e-108 396.4 341 63.6
Glyma.01G166700 Glycine max HOM05D001533 ORTHO05D005122 3.0e-108 396.0 341 63.3
Gorai.007G195800 Gossypium raimondii HOM05D001533 ORTHO05D005122 1.1e-107 394.0 341 73.3
CSS0030027 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D005122 1.5e-107 393.7 341 64.8
Phvul.003G262700 Phaseolus vulgaris HOM05D001533 ORTHO05D005122 3.3e-107 392.5 336 63.1
Phvul.002G109200 Phaseolus vulgaris HOM05D001533 ORTHO05D005122 5.7e-107 391.7 341 61.6
Gohir.D11G183900 Gossypium hirsutum HOM05D001533 ORTHO05D005122 1.3e-106 390.6 341 73.0
Ca_22369_v3 Cicer arietinum L. HOM05D001533 ORTHO05D005122 2.8e-106 389.4 341 65.7
CSS0008566 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D005122 4.8e-106 388.7 315 68.6
VMungo1215G1138 Vigna mungo HOM05D001533 ORTHO05D005122 8.2e-106 387.9 341 61.0
Nn5g29330 Nelumbo nucifera HOM05D001533 ORTHO05D005122 2.4e-105 386.3 338 67.8
Lj2g0008453 Lotus japonicus HOM05D001533 ORTHO05D005122 4.1e-105 385.6 341 62.2
TAR628G0959 Trochodendron aralioides HOM05D001533 ORTHO05D005122 5.3e-105 385.2 341 68.9
Duzib147G0876 Durio zibethinus HOM05D001533 ORTHO05D005122 1.2e-104 384.0 341 71.6
Hma1.2p1_2281F.1_g318810 Hydrangea macrophylla HOM05D001533 ORTHO05D005122 1.2e-104 384.0 262 76.0
Nitab4.5_0001959g0020 Nicotiana tabacum HOM05D001533 ORTHO05D005122 1.2e-104 384.0 262 79.0
DCAR_016613 Daucus carota HOM05D001533 ORTHO05D005122 2.0e-104 383.3 337 70.0
TPR.G30063 Trifolium pratense HOM05D001533 ORTHO05D005122 7.7e-104 381.3 341 60.7
Sed0027203 Sechium edule HOM05D001533 ORTHO05D005122 1.7e-103 380.2 337 61.7
arahy.Tifrunner.gnm1.ann1.H1V2NS Arachis hypogaea HOM05D001533 ORTHO05D005122 6.5e-103 378.3 326 63.8
PSO170G0469 Papaver somniferum HOM05D001533 ORTHO05D005122 3.2e-102 375.9 339 61.1
Hund16484 Selenicereus undatus HOM05D001533 ORTHO05D005122 1.2e-101 374.0 341 71.3
PSO700G0386 Papaver somniferum HOM05D001533 ORTHO05D005122 1.4e-100 370.5 339 60.8
PGSC0003DMG400003635 Solanum tuberosum HOM05D001533 ORTHO05D005122 3.3e-99 365.9 236 83.1
AUR62043756 Chenopodium quinoa HOM05D001533 ORTHO05D005122 4.4e-99 365.5 341 68.9
AUR62044201 Chenopodium quinoa HOM05D001533 ORTHO05D005122 4.4e-99 365.5 341 68.9
AUR62007522 Chenopodium quinoa HOM05D001533 ORTHO05D005122 1.6e-96 357.1 338 67.5
Lalb_Chr05g0229891 Lupinus albus HOM05D001533 ORTHO05D005122 1.6e-96 357.1 341 67.7
Glyma.11G076600 Glycine max HOM05D001533 ORTHO05D005122 1.3e-95 354.0 327 59.9
GSVIVG01018794001 Vitis vinifera HOM05D001533 ORTHO05D005122 1.1e-94 350.9 341 67.4
EL10As8g23833 Beta vulgaris HOM05D001533 ORTHO05D005122 3.2e-94 349.4 366 63.1
Lj2C466T13 Lonicera japonica HOM05D001533 ORTHO05D005122 1.4e-92 344.0 342 57.3
arahy.Tifrunner.gnm1.ann1.JA3WP2 Arachis hypogaea HOM05D001533 ORTHO05D005122 4.0e-92 342.4 262 68.3
CANSAT01G1879 Cannabis sativa HOM05D001533 ORTHO05D005122 8.8e-92 341.3 341 64.2
CANSAT80G2154 Cannabis sativa HOM05D001533 ORTHO05D005122 8.8e-92 341.3 340 57.9
PGR119G1411 Punica granatum HOM05D001533 ORTHO05D005122 1.1e-91 340.9 344 66.6
Eucgr.J02426 Eucalyptus grandis HOM05D001533 ORTHO05D005122 2.0e-91 340.1 342 59.1
Lalb_Chr09g0321781 Lupinus albus HOM05D001533 ORTHO05D005122 4.4e-91 339.0 341 56.0
Lalb_Chr16g0377521 Lupinus albus HOM05D001533 ORTHO05D005122 9.7e-91 337.8 341 62.8
Lj4C217T16 Lonicera japonica HOM05D001533 ORTHO05D005122 7.0e-89 331.6 369 54.2
ECA246G3074 Erigeron canadensis HOM05D001533 ORTHO05D005122 2.0e-88 330.1 341 61.6
THA.LOC104804260 Tarenaya hassleriana HOM05D001533 ORTHO05D005122 1.1e-86 324.3 343 53.9
MBI05_g43883_MAGBIO Magnolia biondii HOM05D001533 ORTHO05D005122 2.3e-84 316.6 341 61.0
THA.LOC104807492 Tarenaya hassleriana HOM05D001533 ORTHO05D005122 5.2e-84 315.5 341 52.8
Os06g0715400 Oryza sativa ssp. japonica HOM05D001533 ORTHO05D005122 2.2e-82 310.1 319 54.9
Oeu005320.1 Olea europaea HOM05D001533 ORTHO05D005122 1.8e-81 307.0 315 58.7
Sc16g0002080 Simmondsia chinensis HOM05D001533 ORTHO05D005122 1.6e-80 303.9 341 62.5
Psat4g098560 Pisum sativum HOM05D001533 ORTHO05D005122 5.9e-80 302.0 342 61.7
Sp3g31420 Schrenkiella parvula HOM05D001533 ORTHO05D005122 1.0e-79 301.2 344 51.7
CDE04G1263 Ceratophyllum demersum HOM05D001533 ORTHO05D005122 2.5e-78 296.6 340 54.4
Zm00001eb228040 Zea mays HOM05D001533 ORTHO05D005122 2.5e-78 296.6 323 53.3
AT2G17990 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 3.6e-77 292.7 346 51.2
Aa31LG1G14750 Aethionema arabicum HOM05D001533 ORTHO05D005122 1.0e-76 291.2 342 51.2
CDE02G4489 Ceratophyllum demersum HOM05D001533 ORTHO05D005122 5.2e-76 288.9 341 54.8
AL3G51060 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 1.5e-75 287.3 345 50.4
Carub.0003s3213 Capsella rubella HOM05D001533 ORTHO05D005122 6.3e-74 282.0 344 50.6
Ah.02g124450 Amaranthus hybridus HOM05D001533 ORTHO05D005122 1.2e-72 277.7 262 61.1
Aqoxy6G02302 Aquilegia oxysepala HOM05D001533 ORTHO05D005122 7.7e-72 275.0 326 51.5
CARHR108480 Cardamine hirsuta HOM05D001533 ORTHO05D005122 1.0e-71 274.6 319 51.4
Thhalv10022777m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 1.3e-71 274.2 343 50.4
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 5.0e-71 272.3 263 58.2
Oeu048459.1 Olea europaea HOM05D001533 ORTHO05D005122 1.1e-70 271.2 262 59.9
Thhalv10004494m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 1.2e-69 267.7 319 49.8
Medtr8g076020 Medicago truncatula HOM05D001533 ORTHO05D005122 4.7e-69 265.8 341 58.1
A07p02680 Brassica napus HOM05D001533 ORTHO05D005122 1.0e-68 264.6 342 49.1
BraA07t28064Z Brassica rapa HOM05D001533 ORTHO05D005122 1.0e-68 264.6 342 49.1
C07p04980 Brassica napus HOM05D001533 ORTHO05D005122 3.0e-68 263.1 342 48.5
BcaC06g36351 Brassica carinata HOM05D001533 ORTHO05D005122 2.6e-67 260.0 342 48.0
BcaB08g34783 Brassica carinata HOM05D001533 ORTHO05D005122 5.7e-67 258.8 342 49.1
Aa31LG8G15170 Aethionema arabicum HOM05D001533 ORTHO05D005122 3.2e-65 253.1 347 47.8
Sp2g30440 Schrenkiella parvula HOM05D001533 ORTHO05D005122 1.5e-62 244.2 303 51.2
AL6G43540 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 1.9e-62 243.8 342 46.5
AL8G45270 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 2.8e-61 240.0 343 46.4
BraA06t26280Z Brassica rapa HOM05D001533 ORTHO05D005122 2.8e-61 240.0 321 48.9
AT5G66250 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 1.0e-60 238.0 344 45.3
A06p33470 Brassica napus HOM05D001533 ORTHO05D005122 3.1e-60 236.5 341 46.9
Thhalv10025665m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 3.1e-60 236.5 320 45.6
BolC3t18147H Brassica oleracea HOM05D001533 ORTHO05D005122 1.2e-59 234.6 341 46.9
Aa31LG6G13050 Aethionema arabicum HOM05D001533 ORTHO05D005122 9.8e-59 231.5 341 41.9
Carub.0008s2824 Capsella rubella HOM05D001533 ORTHO05D005122 2.4e-57 226.9 343 44.9
C03p58890 Brassica napus HOM05D001533 ORTHO05D005122 4.6e-56 222.6 344 44.5
Lsat_1_v5_gn_4_146800 Lactuca sativa HOM05D001533 ORTHO05D005122 1.1e-54 218.0 354 50.6
Sp7g33880 Schrenkiella parvula HOM05D001533 ORTHO05D005122 1.5e-54 217.6 285 46.3
Lsat_1_v5_gn_4_146821 Lactuca sativa HOM05D001533 ORTHO05D005122 1.9e-54 217.2 354 50.3
AagrBONN_evm.TU.Sc2ySwM_228.4945 Anthoceros agrestis HOM05D001533 ORTHO05D005122 2.3e-52 210.3 350 37.7
C09p11970 Brassica napus HOM05D001533 ORTHO05D005122 6.8e-52 208.8 285 49.1
BolC7t40899H Brassica oleracea HOM05D001533 ORTHO05D005122 9.8e-51 204.9 263 47.9
A09p10100 Brassica napus HOM05D001533 ORTHO05D005122 1.7e-50 204.1 284 47.9
BraA09t36653Z Brassica rapa HOM05D001533 ORTHO05D005122 3.7e-50 203.0 296 47.0
BolC9t54085H Brassica oleracea HOM05D001533 ORTHO05D005122 1.4e-49 201.1 303 46.2
BcaNung04495 Brassica carinata HOM05D001533 ORTHO05D005122 2.4e-49 200.3 270 49.3
ATR0680G362 Amborella trichopoda HOM05D001533 ORTHO05D005122 3.2e-49 199.9 336 41.1
Carub.0007s0413 Capsella rubella HOM05D001533 ORTHO05D005122 1.6e-48 197.6 319 40.8
SEGI_32707 Sequoiadendron giganteum HOM05D001533 ORTHO05D005122 3.0e-47 193.4 346 37.6
SMO358G0186 Selaginella moellendorffii HOM05D001533 ORTHO05D005122 2.9e-42 176.8 290 40.7
HanXRQChr16g0531321 Helianthus annuus HOM05D001533 ORTHO05D005122 5.4e-41 172.6 185 50.3
BcaNung04499 Brassica carinata HOM05D001533 ORTHO05D005122 1.7e-39 167.5 213 49.8
AUR62043805 Chenopodium quinoa HOM05D001533 ORTHO05D005122 5.1e-39 166.0 153 81.7
CARHR281470 Cardamine hirsuta HOM05D001533 ORTHO05D005122 3.3e-38 163.3 201 49.8
MD15G1246600 Malus domestica HOM05D001533 ORTHO05D005122 2.4e-33 147.1 134 65.7
AT4G36105 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 1.7e-31 141.0 301 38.5
HPP92_007128 Vanilla planifolia HOM05D001533 ORTHO05D005122 5.6e-30 136.0 228 42.5
unitig_899.g14709 Utricularia gibba HOM05D001533 ORTHO05D000063 4.5e-27 126.3 139 54.0
CARHR244500 Cardamine hirsuta HOM05D001533 ORTHO05D005122 1.7e-26 124.4 317 34.1
C01p02930 Brassica napus HOM05D001533 ORTHO05D024397 7.4e-22 109.0 316 31.6
unitig_699.g19710 Utricularia gibba HOM05D001533 ORTHO05D005122 1.3e-15 88.2 139 54.0
BcaNung00764 Brassica carinata HOM05D001533 ORTHO05D024397 2.3e-15 87.4 286 43.4
A01p02640 Brassica napus HOM05D001533 ORTHO05D024397 4.3e-14 83.2 229 30.6
BraA01t00250Z Brassica rapa HOM05D001533 ORTHO05D024397 4.3e-14 83.2 229 30.6
BolC1t00279H Brassica oleracea HOM05D001533 ORTHO05D024397 2.8e-13 80.5 286 29.7
CARHR281460 Cardamine hirsuta HOM05D001533 ORTHO05D019802 2.0e-11 74.3 45 84.4
arahy.Tifrunner.gnm1.ann1.2HD0B7 Arachis hypogaea HOM05D001533 ORTHO05D019802 2.5e-09 67.4 39 87.2
BraA09t36810Z Brassica rapa HOM05D001533 ORTHO05D019802 1.2e-08 65.1 111 43.2
A09p11640 Brassica napus HOM05D001533 ORTHO05D019802 2.1e-08 64.3 111 43.2


User provided reference genes

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