Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 7.4e-250 866.7 422 100.0
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 1.5e-239 832.4 413 97.8
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 1.3e-230 802.7 423 92.0
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 2.2e-230 802.0 423 92.0
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 7.2e-229 797.0 424 91.5
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 2.0e-226 788.9 422 91.0
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 2.8e-225 785.0 423 89.4
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 1.6e-204 716.1 422 79.9
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.2e-199 699.9 421 78.9
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.0e-199 699.1 421 78.6
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 1.6e-196 689.5 426 76.5
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 3.1e-187 658.7 480 67.7
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 2.2e-185 652.5 419 74.5
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 2.2e-185 652.5 433 73.0
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 7.0e-184 647.5 488 66.6
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 1.4e-179 633.3 422 70.6
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 1.8e-179 632.9 426 71.1
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 2.3e-179 632.5 416 72.4
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 1.9e-173 612.8 424 67.2
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 3.3e-173 612.1 425 68.0
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 9.5e-173 610.5 425 68.7
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 1.2e-172 610.1 421 67.9
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 2.4e-171 605.9 451 64.7
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 2.4e-171 605.9 424 67.9
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 2.0e-170 602.8 425 68.5
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 2.6e-170 602.4 426 67.1
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 9.9e-170 600.5 437 69.1
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 1.7e-169 599.7 441 64.4
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 6.4e-169 597.8 434 65.2
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 6.4e-169 597.8 441 64.2
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 2.4e-168 595.9 430 65.1
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 3.9e-166 588.6 410 67.1
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 4.3e-165 585.1 420 65.5
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 4.3e-165 585.1 431 65.2
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 3.6e-164 582.0 429 66.4
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 1.1e-163 580.5 430 63.3
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 4.0e-163 578.6 423 64.1
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 5.2e-163 578.2 425 65.2
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 9.0e-163 577.4 440 61.6
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 1.5e-162 576.6 463 61.1
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 8.4e-161 570.9 424 65.1
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.2e-160 568.9 422 63.5
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 2.7e-159 565.8 371 72.0
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 6.0e-159 564.7 430 62.1
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 7.8e-159 564.3 422 63.3
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 3.9e-158 562.0 347 77.5
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 1.5e-157 560.1 431 61.5
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 2.5e-157 559.3 433 61.7
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 4.3e-157 558.5 422 62.6
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 4.3e-157 558.5 422 62.6
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 9.6e-157 557.4 422 62.6
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 9.6e-157 557.4 434 62.0
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.6e-156 556.6 423 63.4
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 8.1e-156 554.3 430 61.6
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 8.1e-156 554.3 425 61.6
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.8e-155 553.1 422 62.1
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.8e-155 553.1 422 62.1
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 3.1e-155 552.4 421 62.0
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 6.9e-155 551.2 454 59.7
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 2.0e-154 549.7 421 61.5
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 2.6e-154 549.3 424 61.1
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 3.4e-154 548.9 421 61.8
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.7e-153 546.6 452 59.3
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 6.4e-153 544.7 412 62.6
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 1.4e-152 543.5 421 62.7
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 4.2e-152 542.0 419 61.8
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 4.2e-152 542.0 421 60.8
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 9.6e-149 530.8 431 59.6
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 1.5e-146 523.5 424 58.7
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.9e-145 519.2 415 60.5
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 3.5e-143 512.3 444 55.6
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 7.9e-143 511.1 421 58.2
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 3.0e-142 509.2 421 58.0
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 1.9e-141 506.5 422 57.6
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 9.6e-141 504.2 421 57.5
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 3.5e-135 485.7 426 55.9
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.0e-134 484.2 426 55.4
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 1.4e-131 473.8 392 57.7
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.1e-128 464.2 426 54.0
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.4e-128 463.8 422 55.5
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.4e-128 463.8 422 55.5
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.9e-128 463.4 407 54.8
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 6.1e-127 458.4 347 61.7
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 1.3e-124 450.7 456 53.9
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.1e-120 437.6 347 62.5
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.3e-118 429.9 422 48.8
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 2.0e-114 416.8 334 60.8
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 2.3e-110 403.3 448 46.7
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 1.6e-106 390.6 427 45.4
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 6.1e-103 378.6 415 46.0
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 1.8e-99 367.1 493 40.8
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 2.9e-97 359.8 249 69.5
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 3.2e-96 356.3 216 79.6
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 5.4e-91 339.0 206 77.2
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 5.0e-81 305.8 386 41.5
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 1.7e-76 290.8 190 68.9
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 3.2e-75 286.6 186 70.4
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 9.2e-67 258.5 185 64.9
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 4.6e-66 256.1 186 61.3
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 4.4e-53 213.0 158 62.0
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.9e-48 197.6 147 57.8
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 1.7e-44 184.5 103 83.5
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 3.8e-44 183.3 106 79.2
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 3.2e-43 180.3 182 54.4
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 1.2e-42 178.3 182 53.8
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 1.2e-42 178.3 182 54.4
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 1.7e-41 174.5 145 62.1
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 9.6e-40 168.7 152 52.6
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.6e-39 167.9 117 65.8
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.1e-39 167.5 125 62.4
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 4.0e-38 163.3 125 59.2
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 1.2e-34 151.8 125 62.4
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 6.7e-33 146.0 82 80.5
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 8.7e-33 145.6 120 56.7
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 7.4e-32 142.5 88 75.0
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.1e-27 128.6 101 56.4
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 9.3e-27 125.6 72 76.4
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 1.2e-26 125.2 86 69.8
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.1e-26 124.4 108 51.9
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 4.8e-23 113.2 83 61.4
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 8.2e-23 112.5 119 52.1
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.5e-21 108.2 90 52.2
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 8.4e-20 102.4 58 72.4
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 1.9e-19 101.3 60 68.3
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 2.4e-14 84.3 81 50.6
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 6.9e-14 82.8 53 67.9
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 1.5e-13 81.6 171 29.8
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 3.8e-12 77.0 51 64.7
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 4.6e-10 70.1 47 63.8
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 1.8e-09 68.2 42 69.0
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 2.3e-09 67.8 37 73.0
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 8.8e-09 65.9 42 66.7
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 2.0e-08 64.7 42 69.0
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 2.4e-06 57.8 100 36.0
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 9.1e-06 55.8 100 35.0


User provided reference genes

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