Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006077g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-202 709.1 351 100.0
Nitab4.5_0006547g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.6e-80 302.4 183 80.3
Nitab4.5_0007527g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.5e-73 278.9 254 61.8
Nitab4.5_0000386g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-50 204.9 122 82.0
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 1.7e-50 204.1 268 43.7
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 1.5e-46 191.0 320 36.6
Nitab4.5_0003141g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.2e-42 177.2 244 42.6
Nitab4.5_0000138g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.8e-37 160.2 309 39.2
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 9.1e-36 155.2 195 39.0
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 1.6e-35 154.5 195 39.0
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 1.7e-34 151.0 320 30.3
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 8.5e-34 148.7 256 34.8
Lalb_Chr22g0358521 Lupinus albus HOM05D002954 ORTHO05D003353 2.5e-33 147.1 257 36.6
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 9.4e-33 145.2 182 39.0
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.0e-31 140.2 229 34.1
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 4.0e-31 139.8 318 31.1
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.6e-30 137.1 222 33.8
Nitab4.5_0003874g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.2e-29 134.0 234 40.2
Nitab4.5_0004985g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.2e-29 134.0 140 47.9
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 3.7e-29 133.3 203 39.4
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 3.1e-28 130.2 192 39.1
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 1.2e-27 128.3 328 29.6
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 2.7e-27 127.1 186 38.2
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 5.9e-27 125.9 326 28.8
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 7.7e-27 125.6 214 34.1
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 6.6e-26 122.5 167 36.5
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 1.5e-25 121.3 235 31.1
Phvul.001G154901 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.1e-24 117.5 209 34.4
Nitab4.5_0006180g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.3e-23 114.0 104 51.9
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.0e-23 113.2 147 38.1
Nitab4.5_0009966g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.0e-23 113.2 187 34.8
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 2.0e-22 110.9 142 44.4
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 4.4e-22 109.8 256 30.5
Nitab4.5_0000074g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-21 108.2 236 28.8
Nitab4.5_0000562g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.7e-21 107.8 96 59.4
arahy.Tifrunner.gnm1.ann1.HJ32VC Arachis hypogaea HOM05D002954 ORTHO05D003353 2.2e-21 107.5 147 38.1
Sopen01g012110 Solanum pennellii HOM05D002954 ORTHO05D003353 6.4e-21 105.9 151 37.7
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.3e-21 105.5 195 32.8
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 8.3e-21 105.5 241 30.3
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 1.1e-20 105.1 287 26.5
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 1.4e-20 104.8 257 27.2
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 4.1e-20 103.2 224 30.4
Nitab4.5_0000154g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.2e-20 102.1 230 33.0
Peaxi162Scf00005g00443 Petunia axillaris HOM05D002954 ORTHO05D003353 3.5e-19 100.1 272 30.9
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 3.5e-19 100.1 259 27.4
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-18 98.6 201 30.3
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 5.0e-18 96.3 257 28.4
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 5.0e-18 96.3 243 24.7
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 1.1e-17 95.1 358 25.4
Nitab4.5_0004481g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.5e-17 94.0 77 62.3
Nitab4.5_0000062g0240 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.6e-17 92.8 47 91.5
Nitab4.5_0000358g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.6e-17 92.8 86 48.8
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 7.3e-17 92.4 247 27.5
arahy.Tifrunner.gnm1.ann1.E8HHXW Arachis hypogaea HOM05D002954 ORTHO05D010308 2.1e-16 90.9 231 28.6
arahy.Tifrunner.gnm1.ann1.Y6RTQD Arachis hypogaea HOM05D002954 ORTHO05D010308 3.6e-16 90.1 231 29.0
Peaxi162Scf00818g00410 Petunia axillaris HOM05D002954 ORTHO05D003353 3.6e-16 90.1 202 28.7
Nitab4.5_0003920g0040 Nicotiana tabacum HOM05D002954 ORTHO05D015034 4.7e-16 89.7 77 54.5
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 6.2e-16 89.4 150 32.0
Nitab4.5_0000668g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.0e-16 89.0 100 48.0
PGSC0003DMG400040446 Solanum tuberosum HOM05D002954 ORTHO05D003353 1.0e-15 88.6 219 29.2
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 1.4e-15 88.2 230 27.4
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 1.4e-15 88.2 258 24.0
Nitab4.5_0000668g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.3e-15 87.4 63 65.1
Peaxi162Scf00006g00207 Petunia axillaris HOM05D002954 ORTHO05D003353 3.1e-15 87.0 235 24.7
Phvul.011G145200 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.1e-15 87.0 294 25.2
Nitab4.5_0006031g0080 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.2e-15 86.3 43 93.0
arahy.Tifrunner.gnm1.ann1.VWW6CB Arachis hypogaea HOM05D002954 ORTHO05D003353 1.2e-14 85.1 294 25.9
Nitab4.5_0010215g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.4e-14 83.6 66 54.5
Nitab4.5_0000712g0160 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.4e-14 83.2 159 33.3
Nitab4.5_0002123g0030 Nicotiana tabacum HOM05D002954 ORTHO05D286554 4.4e-14 83.2 68 63.2
arahy.Tifrunner.gnm1.ann1.35BP8C Arachis hypogaea HOM05D009662 ORTHO05D003353 7.5e-14 82.4 125 35.2
arahy.Tifrunner.gnm1.ann1.LZRM5J Arachis hypogaea HOM05D011000 ORTHO05D000385 3.7e-13 80.1 200 27.0
TPR.G22956 Trifolium pratense HOM05D013784 ORTHO05D003353 3.7e-13 80.1 85 42.4
Nitab4.5_0001542g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.9e-13 79.7 108 41.7
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 6.4e-13 79.3 217 22.6
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 8.3e-13 79.0 135 32.6
CAN.G211.11 Capsicum annuum HOM05D013683 ORTHO05D014550 1.4e-12 78.2 165 31.5
VMungo0720G1591 Vigna mungo HOM05D002954 ORTHO05D000385 1.9e-12 77.8 173 30.6
TPR.G13772 Trifolium pratense HOM05D000107 ORTHO05D000062 3.2e-12 77.0 107 31.8
Nitab4.5_0006326g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.1e-12 76.6 159 27.7
Lj1g0024925 Lotus japonicus HOM05D002954 ORTHO05D003353 5.4e-12 76.3 164 31.1
Peaxi162Scf00914g00054 Petunia axillaris HOM05D002954 ORTHO05D003353 7.0e-12 75.9 178 23.0
Psat0s797g0080 Pisum sativum HOM05D002954 ORTHO05D010767 9.2e-12 75.5 225 24.4
Nitab4.5_0000068g0470 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.6e-11 73.2 156 27.6
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 1.0e-10 72.0 206 27.2
Lj2g0015436 Lotus japonicus HOM05D002954 ORTHO05D010308 1.0e-10 72.0 170 24.7
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-10 72.0 129 31.0
Nitab4.5_0009529g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-10 71.6 211 28.9
arahy.Tifrunner.gnm1.ann1.2XU2QD Arachis hypogaea HOM05D002954 ORTHO05D003353 3.9e-10 70.1 173 32.4
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 3.9e-10 70.1 122 32.0
Nitab4.5_0006141g0010 Nicotiana tabacum HOM05D002954 ORTHO05D283040 5.0e-10 69.7 78 48.7
Nitab4.5_0008563g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.0e-10 69.7 111 35.1
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.6e-10 68.9 232 24.1
Nitab4.5_0002100g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-09 68.6 64 48.4
VMungo0464G1180 Vigna mungo HOM05D003555 ORTHO05D004542 1.1e-09 68.6 68 42.6
arahy.Tifrunner.gnm1.ann1.0IB4TY Arachis hypogaea HOM05D002954 ORTHO05D003353 1.9e-09 67.8 205 25.9
Psat0s2164g0040 Pisum sativum HOM05D000107 ORTHO05D010767 1.9e-09 67.8 143 30.1
Psat0s2247g0040 Pisum sativum HOM05D002954 ORTHO05D017747 3.3e-09 67.0 100 40.0
Psat4g174600 Pisum sativum HOM05D002954 ORTHO05D003353 3.3e-09 67.0 100 40.0
Lj2g0004380 Lotus japonicus HOM05D005022 ORTHO05D002200 4.3e-09 66.6 168 25.0
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.3e-09 66.6 108 34.3
Nitab4.5_0001404g0070 Nicotiana tabacum HOM05D002954 ORTHO05D015034 4.3e-09 66.6 55 54.5
Nitab4.5_0002983g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.3e-09 66.6 34 85.3
CAN.G11.13 Capsicum annuum HOM05D000262 ORTHO05D000300 5.6e-09 66.2 62 53.2
Lj6g0018783 Lotus japonicus HOM05D002954 ORTHO05D000385 5.6e-09 66.2 151 24.5
Nitab4.5_0000386g0150 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.3e-09 65.9 52 61.5
Nitab4.5_0002983g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.3e-09 65.9 42 71.4
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.7e-08 63.2 106 32.1
Lsat_1_v5_gn_7_106561 Lactuca sativa HOM05D001309 ORTHO05D000385 6.2e-08 62.8 189 29.6
Nitab4.5_0004786g0070 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.2e-08 62.8 33 84.8
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.1e-08 62.4 228 24.6
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.1e-07 62.0 215 26.5
Nitab4.5_0000612g0070 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-07 61.6 136 31.6
Ca_11947_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.3e-07 60.8 99 31.3
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 2.3e-07 60.8 199 26.1
arahy.Tifrunner.gnm1.ann1.I134XL Arachis hypogaea HOM05D011000 ORTHO05D003353 3.1e-07 60.5 152 27.0
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 3.1e-07 60.5 171 26.9
Peaxi162Scf00603g00522 Petunia axillaris HOM05D002954 ORTHO05D003353 4.0e-07 60.1 122 26.2
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.2e-07 59.7 234 23.9
Phvul.011G161300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 5.2e-07 59.7 259 26.6
Sopen04g009500 Solanum pennellii HOM05D022806 ORTHO05D030645 5.2e-07 59.7 87 41.4
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.8e-07 59.3 229 22.3
arahy.Tifrunner.gnm1.ann1.FX9Q6E Arachis hypogaea HOM05D002954 ORTHO05D003353 8.9e-07 58.9 185 24.3
Lj2g0001970 Lotus japonicus HOM05D003938 ORTHO05D004759 8.9e-07 58.9 167 23.4
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-06 58.5 231 24.2
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-06 58.5 231 24.2
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-06 58.5 231 24.2
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.0e-06 57.8 70 40.0
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.6e-06 57.4 231 24.2
Nitab4.5_0001155g0120 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.6e-06 57.4 60 46.7
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 2.6e-06 57.4 196 25.0
Solyc07g026873.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 2.6e-06 57.4 49 53.1
arahy.Tifrunner.gnm1.ann1.WG3QGY Arachis hypogaea HOM05D002954 ORTHO05D003353 3.4e-06 57.0 131 30.5
Nitab4.5_0004792g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.4e-06 57.0 119 29.4
Nitab4.5_0000051g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.4e-06 56.6 47 57.4
CSS0031187 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.8e-06 56.2 234 24.4
Solyc05g042010.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 7.5e-06 55.8 47 53.2
Sopen04g020530 Solanum pennellii HOM05D002954 ORTHO05D003353 7.5e-06 55.8 72 44.4
arahy.Tifrunner.gnm1.ann1.DXNF3X Arachis hypogaea HOM05D002954 ORTHO05D003353 9.8e-06 55.5 123 26.8
Gohir.D10G156350 Gossypium hirsutum HOM05D001309 ORTHO05D000385 9.8e-06 55.5 137 29.9
Hund24609 Selenicereus undatus HOM05D001385 ORTHO05D008760 9.8e-06 55.5 78 34.6


User provided reference genes

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