Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005671g0050 Nicotiana tabacum HOM05D002168 ORTHO05D043365 9.5e-60 233.4 126 100.0
Nitab4.5_0000098g0270 Nicotiana tabacum HOM05D002168 ORTHO05D002277 8.6e-53 210.3 125 90.4
Peaxi162Scf01421g00011 Petunia axillaris HOM05D002168 ORTHO05D002277 1.2e-43 179.9 123 79.7
PGSC0003DMG401007628 Solanum tuberosum HOM05D002168 ORTHO05D002277 9.9e-25 117.1 92 72.8
Sopen08g019820 Solanum pennellii HOM05D002168 ORTHO05D002277 7.8e-22 107.5 92 67.4
Solyc08g066140.3 Solanum lycopersicum HOM05D002168 ORTHO05D002277 8.7e-21 104.0 91 65.9
CAN.G9.1 Capsicum annuum HOM05D002168 ORTHO05D002277 1.2e-17 93.6 60 81.7
QL07p017571 Quercus lobata HOM05D002168 ORTHO05D002277 3.2e-15 85.5 142 40.8
Cfa017714 Carpinus fangiana HOM05D002168 ORTHO05D002277 7.9e-14 80.9 142 39.4
CSS0003504 Camellia sinensis var. sinensis HOM05D002168 ORTHO05D043365 1.0e-13 80.5 139 41.7
Dinv25043 Davidia involucrata HOM05D002168 ORTHO05D002277 1.3e-13 80.1 72 56.9
MBI11_g10545_MAGBIO Magnolia biondii HOM05D002168 ORTHO05D002277 8.7e-13 77.4 147 37.4
Prupe.7G014600 Prunus persica HOM05D002168 ORTHO05D002277 1.1e-12 77.0 130 43.8
Oeu044206.2 Olea europaea HOM05D002168 ORTHO05D002277 2.5e-12 75.9 124 43.5
TAR633G2049 Trochodendron aralioides HOM05D002168 ORTHO05D002277 4.3e-12 75.1 146 41.8
Dinv13788 Davidia involucrata HOM05D002168 ORTHO05D002277 3.6e-11 72.0 109 41.3
DCAR_016962 Daucus carota HOM05D002168 ORTHO05D002277 4.8e-11 71.6 132 45.5
Manes.08G153100 Manihot esculenta HOM05D002168 ORTHO05D002277 8.1e-11 70.9 132 38.6
Nn2g14555 Nelumbo nucifera HOM05D002168 ORTHO05D002277 8.1e-11 70.9 143 36.4
PGR042G1483 Punica granatum HOM05D002168 ORTHO05D002277 1.1e-10 70.5 127 40.9
Rhsim03G0049500 Rhododendron simsii HOM05D002168 ORTHO05D002277 1.1e-10 70.5 136 36.0
Haze_20409 Corylus avellana HOM05D002168 ORTHO05D002277 1.8e-10 69.7 140 38.6
vmacro07652 Vaccinium macrocarpon HOM05D002168 ORTHO05D002277 1.8e-10 69.7 134 39.6
Actinidia03921 Actinidia chinensis HOM05D002168 ORTHO05D002277 3.1e-10 68.9 141 36.9
arahy.Tifrunner.gnm1.ann1.B3FMDE Arachis hypogaea HOM05D002168 ORTHO05D002277 4.0e-10 68.6 138 37.0
TWI32G0897 Tripterygium wilfordii HOM05D002168 ORTHO05D002277 6.9e-10 67.8 142 38.0
SGA_v2.0_scaffold69G23217 Striga asiatica HOM05D002168 ORTHO05D002277 2.9e-08 62.4 132 43.9
MD12G1011400 Malus domestica HOM05D002168 ORTHO05D002277 3.8e-08 62.0 130 41.5
arahy.Tifrunner.gnm1.ann1.V0KP8I Arachis hypogaea HOM05D002168 ORTHO05D002277 8.4e-08 60.8 133 35.3
MD14G1008000 Malus domestica HOM05D002168 ORTHO05D002277 8.4e-08 60.8 129 38.0
Phvul.001G105633 Phaseolus vulgaris HOM05D002168 ORTHO05D002277 1.1e-07 60.5 128 39.1
Eucgr.A02140 Eucalyptus grandis HOM05D002168 ORTHO05D002277 1.9e-07 59.7 133 35.3
GSVIVG01029958001 Vitis vinifera HOM05D002168 ORTHO05D002277 4.2e-07 58.5 107 42.1
CiPaw.09G166700 Carya illinoinensis HOM05D002168 ORTHO05D002277 7.1e-07 57.8 131 37.4
Potri.013G065700 Populus trichocarpa HOM05D002168 ORTHO05D002277 7.1e-07 57.8 124 37.1
Lalb_Chr14g0364831 Lupinus albus HOM05D002168 ORTHO05D002277 1.2e-06 57.0 127 37.8
ECA238G2164 Erigeron canadensis HOM05D002168 ORTHO05D002277 2.1e-06 56.2 125 37.6
Lj1A1072T24 Lonicera japonica HOM05D002168 ORTHO05D002277 2.7e-06 55.8 125 36.0
Cc06_g21470 Coffea canephora HOM05D002168 ORTHO05D002277 6.0e-06 54.7 128 38.3
Sabra13G0057400 Salix brachista HOM05D002168 ORTHO05D002277 7.9e-06 54.3 125 34.4


User provided reference genes

Program Settings