Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.6e-61 238.4 113 100.0
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 3.5e-53 211.5 113 86.7
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 4.5e-53 211.1 113 86.7
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 2.2e-52 208.8 113 85.8
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 2.2e-52 208.8 113 85.8
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 5.2e-49 197.6 113 79.6
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 6.7e-49 197.2 113 80.5
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 5.7e-48 194.1 114 83.3
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 9.7e-48 193.4 113 76.1
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 9.7e-48 193.4 113 77.0
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 9.7e-48 193.4 113 77.0
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 2.2e-47 192.2 113 77.9
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 2.2e-47 192.2 113 77.0
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 3.7e-47 191.4 113 77.0
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 4.8e-47 191.0 113 77.0
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 4.8e-47 191.0 113 75.2
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 6.3e-47 190.7 113 76.1
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 6.3e-47 190.7 113 77.9
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 8.2e-47 190.3 112 79.5
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 8.2e-47 190.3 113 75.2
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 8.2e-47 190.3 113 74.3
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 1.4e-46 189.5 113 77.0
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 1.4e-46 189.5 113 76.1
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 1.4e-46 189.5 113 75.2
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.4e-46 189.5 113 76.1
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 2.4e-46 188.7 113 75.2
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 2.4e-46 188.7 113 76.1
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 2.4e-46 188.7 113 75.2
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 2.4e-46 188.7 113 72.6
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 2.4e-46 188.7 113 76.1
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 3.1e-46 188.3 112 75.0
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 3.1e-46 188.3 113 74.3
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 3.1e-46 188.3 113 75.2
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 4.1e-46 188.0 113 75.2
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 4.1e-46 188.0 113 77.0
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 5.3e-46 187.6 113 75.2
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 7.0e-46 187.2 113 76.1
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 7.0e-46 187.2 113 74.3
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 7.0e-46 187.2 113 78.8
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 9.1e-46 186.8 113 74.3
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 9.1e-46 186.8 113 74.3
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 1.6e-45 186.0 113 72.6
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.6e-45 186.0 113 74.3
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 1.6e-45 186.0 113 76.1
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 1.6e-45 186.0 113 73.5
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.6e-45 186.0 113 76.1
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 2.0e-45 185.7 113 77.0
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 2.0e-45 185.7 113 76.1
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 3.5e-45 184.9 113 73.5
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 3.5e-45 184.9 113 73.5
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 4.5e-45 184.5 113 77.0
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 4.5e-45 184.5 113 77.0
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 4.5e-45 184.5 113 74.3
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 4.5e-45 184.5 113 71.7
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 5.9e-45 184.1 113 72.6
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 7.7e-45 183.7 113 71.7
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 1.0e-44 183.3 120 72.5
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 1.3e-44 183.0 113 74.3
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 1.3e-44 183.0 113 73.5
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 3.8e-44 181.4 113 75.2
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 3.8e-44 181.4 113 76.1
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 5.0e-44 181.0 113 74.3
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 6.5e-44 180.6 113 72.6
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 1.1e-43 179.9 113 72.6
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 1.9e-43 179.1 113 72.6
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 4.2e-43 177.9 113 72.6
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 4.2e-43 177.9 113 69.9
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 5.5e-43 177.6 113 70.8
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 5.5e-43 177.6 113 69.9
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 7.2e-43 177.2 113 71.7
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 7.2e-43 177.2 103 79.6
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 9.4e-43 176.8 108 75.0
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 9.4e-43 176.8 113 71.7
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 2.1e-42 175.6 113 67.3
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 2.1e-42 175.6 113 67.3
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 2.7e-42 175.3 113 69.0
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 3.6e-42 174.9 113 74.3
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 3.6e-42 174.9 113 70.8
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 6.1e-42 174.1 113 68.1
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 1.0e-41 173.3 114 71.1
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 1.4e-41 172.9 113 68.1
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 3.0e-41 171.8 120 70.0
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 3.0e-41 171.8 113 70.8
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 4.0e-41 171.4 113 68.1
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 4.0e-41 171.4 113 70.8
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 4.0e-41 171.4 113 69.0
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 8.8e-41 170.2 133 62.4
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 1.2e-40 169.9 113 69.0
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 1.5e-40 169.5 113 68.1
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 2.0e-40 169.1 115 69.6
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 2.6e-40 168.7 113 69.9
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 2.6e-40 168.7 136 61.8
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 4.4e-40 167.9 113 67.3
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 5.7e-40 167.5 113 69.0
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 5.7e-40 167.5 113 69.0
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 5.7e-40 167.5 113 69.0
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 9.8e-40 166.8 113 69.0
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.7e-39 166.0 113 70.8
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.8e-38 162.5 113 67.3
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 2.4e-38 162.2 91 83.5
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 5.4e-38 161.0 113 67.3
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 5.4e-38 161.0 113 64.6
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 7.7e-37 157.1 91 78.0
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 3.8e-36 154.8 113 62.8
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 5.0e-36 154.5 91 75.8
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 1.2e-34 149.8 114 61.4
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 6.1e-34 147.5 112 57.1
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 6.1e-34 147.5 114 63.2
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 4.0e-33 144.8 115 62.6
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 4.0e-33 144.8 107 62.6
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 5.2e-33 144.4 112 59.8
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.6e-32 142.1 112 58.9
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 5.7e-32 141.0 91 70.3
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 5.7e-32 141.0 112 58.0
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 6.3e-31 137.5 91 68.1
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 3.1e-30 135.2 112 56.2
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 9.2e-30 133.7 106 55.7
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 2.7e-29 132.1 111 55.0
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 4.5e-29 131.3 115 59.1
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 3.3e-27 125.2 92 62.0
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 5.6e-27 124.4 92 66.3
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 8.0e-26 120.6 107 55.1
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 1.2e-24 116.7 114 48.2
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 6.4e-23 110.9 113 51.3
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 2.3e-17 92.4 113 52.2
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.0e-17 91.7 120 46.7
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 3.2e-14 82.0 112 42.9
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 3.7e-07 58.5 35 80.0
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.4e-06 56.6 35 77.1


User provided reference genes

Program Settings