Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005649g0010 Nicotiana tabacum HOM05D007062 ORTHO05D008941 1.0e-103 380.6 269 100.0
Nitab4.5_0000993g0090 Nicotiana tabacum HOM05D007062 ORTHO05D008941 3.6e-101 372.1 269 98.9
CAN.G1217.21 Capsicum annuum HOM05D007062 ORTHO05D008941 1.3e-87 327.0 270 90.0
PGSC0003DMG400004788 Solanum tuberosum HOM05D007062 ORTHO05D008941 3.0e-87 325.9 270 91.1
Sopen08g027570 Solanum pennellii HOM05D007062 ORTHO05D008941 2.5e-86 322.8 270 91.9
Peaxi162Scf00002g00075 Petunia axillaris HOM05D007062 ORTHO05D008941 5.6e-86 321.6 269 89.2
Solyc08g079110.4 Solanum lycopersicum HOM05D007062 ORTHO05D008941 3.1e-84 315.8 270 90.7
Migut.A00806 Erythranthe guttata HOM05D007062 ORTHO05D008941 6.1e-72 275.0 273 79.9
CSS0040813 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 6.7e-71 271.6 278 79.1
SalBow6G7097 Salvia bowleyana HOM05D007062 ORTHO05D008941 5.7e-70 268.5 273 79.9
CSS0025302 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 9.7e-70 267.7 284 77.5
Cc08_g12960 Coffea canephora HOM05D007062 ORTHO05D008941 5.3e-68 261.9 271 77.9
Glyma.11G030700 Glycine max HOM05D007062 ORTHO05D008941 3.8e-66 255.8 272 79.0
TPR.G25898 Trifolium pratense HOM05D007062 ORTHO05D008941 3.8e-66 255.8 271 78.6
MSTRG.25539 Avicennia marina HOM05D007062 ORTHO05D008941 8.5e-66 254.6 273 67.8
TAR375G0275 Trochodendron aralioides HOM05D007062 ORTHO05D008941 8.5e-66 254.6 273 77.3
Actinidia02105 Actinidia chinensis HOM05D007062 ORTHO05D008941 1.1e-65 254.2 272 77.6
Phvul.002G061100 Phaseolus vulgaris HOM05D007062 ORTHO05D008941 2.5e-65 253.1 286 73.4
CiPaw.12G106400 Carya illinoinensis HOM05D007062 ORTHO05D008941 3.2e-65 252.7 284 75.4
arahy.Tifrunner.gnm1.ann1.06MV4V Arachis hypogaea HOM05D007062 ORTHO05D008941 7.2e-65 251.5 236 83.9
arahy.Tifrunner.gnm1.ann1.FU46H2 Arachis hypogaea HOM05D007062 ORTHO05D008941 7.2e-65 251.5 236 83.9
GSVIVG01001267001 Vitis vinifera HOM05D007062 ORTHO05D008941 9.4e-65 251.1 259 80.3
Lsat_1_v5_gn_6_2361 Lactuca sativa HOM05D007062 ORTHO05D008941 1.2e-64 250.8 278 76.3
Cpa.g.sc29.119 Carica papaya HOM05D007062 ORTHO05D008941 4.6e-64 248.8 273 77.3
Ciclev10021545m.g Citrus clementina HOM05D007062 ORTHO05D008941 6.1e-64 248.4 287 74.6
Sed0027513 Sechium edule HOM05D007062 ORTHO05D008941 6.1e-64 248.4 272 76.8
Lj2g0026876 Lotus japonicus HOM05D007062 ORTHO05D008941 1.8e-63 246.9 272 76.8
Manes.01G076100 Manihot esculenta HOM05D007062 ORTHO05D008941 1.8e-63 246.9 284 69.4
Thhalv10008422m.g Eutrema salsugineum HOM05D007062 ORTHO05D008941 2.3e-63 246.5 281 76.2
SGA_v2.0_scaffold120G32845 Striga asiatica HOM05D007062 ORTHO05D008941 5.1e-63 245.4 270 75.6
ECA232G1654 Erigeron canadensis HOM05D007062 ORTHO05D008941 8.8e-63 244.6 277 74.0
VMungo1215G0274 Vigna mungo HOM05D007062 ORTHO05D008941 8.8e-63 244.6 286 73.1
Carub.0001s1193 Capsella rubella HOM05D007062 ORTHO05D008941 1.5e-62 243.8 281 74.0
Duzib205G0297 Durio zibethinus HOM05D007062 ORTHO05D008941 1.5e-62 243.8 287 73.2
Atru.chr9.1388 Acer truncatum HOM05D007062 ORTHO05D008941 2.6e-62 243.0 284 73.9
BcaC07g42568 Brassica carinata HOM05D007062 ORTHO05D008941 2.6e-62 243.0 280 74.6
C08p47500 Brassica napus HOM05D007062 ORTHO05D008941 2.6e-62 243.0 280 75.0
Eucgr.D02028 Eucalyptus grandis HOM05D007062 ORTHO05D008941 2.6e-62 243.0 256 62.9
Prupe.5G075900 Prunus persica HOM05D007062 ORTHO05D008941 2.6e-62 243.0 283 70.3
BcaC07g41714 Brassica carinata HOM05D007062 ORTHO05D008941 3.3e-62 242.7 280 74.6
A09p63980 Brassica napus HOM05D007062 ORTHO05D008941 4.4e-62 242.3 280 73.9
AL1G23540 Arabidopsis lyrata HOM05D007062 ORTHO05D008941 7.4e-62 241.5 281 73.3
PSO782G2909 Papaver somniferum HOM05D007062 ORTHO05D008941 7.4e-62 241.5 283 72.1
BraA09t41747Z Brassica rapa HOM05D007062 ORTHO05D008941 9.7e-62 241.1 280 74.3
PSO063G0503 Papaver somniferum HOM05D007062 ORTHO05D008941 9.7e-62 241.1 277 74.7
BolC8t52291H Brassica oleracea HOM05D007062 ORTHO05D008941 1.3e-61 240.7 280 75.7
ClCG01G003790 Citrullus lanatus HOM05D007062 ORTHO05D008941 1.7e-61 240.4 283 72.8
Potri.003G112900 Populus trichocarpa HOM05D007062 ORTHO05D008941 2.2e-61 240.0 285 70.9
QL12p014002 Quercus lobata HOM05D007062 ORTHO05D008941 2.2e-61 240.0 314 48.7
Lalb_Chr16g0379721 Lupinus albus HOM05D007062 ORTHO05D008941 2.8e-61 239.6 220 86.8
Sp1g10870 Schrenkiella parvula HOM05D007062 ORTHO05D008941 2.8e-61 239.6 281 74.0
MELO3C005562.2 Cucumis melo HOM05D007062 ORTHO05D008941 4.8e-61 238.8 284 72.9
AT1G12250 Arabidopsis thaliana HOM05D007062 ORTHO05D008941 8.2e-61 238.0 284 73.2
CsaV3_5G003940 Cucumis sativus L. HOM05D007062 ORTHO05D008941 8.2e-61 238.0 278 73.4
Thecc.03G257500 Theobroma cacao HOM05D007062 ORTHO05D008941 1.4e-60 237.3 292 65.8
TWI60G0310 Tripterygium wilfordii HOM05D007062 ORTHO05D008941 1.4e-60 237.3 270 76.3
HanXRQChr02g0049591 Helianthus annuus HOM05D007062 ORTHO05D008941 1.8e-60 236.9 309 68.3
Gohir.D08G190800 Gossypium hirsutum HOM05D007062 ORTHO05D008941 2.4e-60 236.5 285 67.7
THA.LOC104818475 Tarenaya hassleriana HOM05D007062 ORTHO05D008941 2.4e-60 236.5 286 70.6
PGR031G1282 Punica granatum HOM05D007062 ORTHO05D008941 3.1e-60 236.1 255 65.9
Ah.02g116970 Amaranthus hybridus HOM05D007062 ORTHO05D008941 9.1e-60 234.6 275 74.2
RcHm_v2.0_Chr7g0202221 Rosa chinensis HOM05D007062 ORTHO05D008941 9.1e-60 234.6 284 73.6
Aa31LG1G2430 Aethionema arabicum HOM05D007062 ORTHO05D008941 1.5e-59 233.8 289 61.6
Zm00001eb248670 Zea mays HOM05D007062 ORTHO05D008941 1.5e-59 233.8 279 72.4
Gorai.004G200900 Gossypium raimondii HOM05D007062 ORTHO05D008941 2.6e-59 233.0 285 63.5
MD06G1065500 Malus domestica HOM05D007062 ORTHO05D008941 4.5e-59 232.3 285 73.7
Medtr5g012110 Medicago truncatula HOM05D007062 ORTHO05D008941 5.9e-59 231.9 272 73.9
Hund11577 Selenicereus undatus HOM05D007062 ORTHO05D008941 7.7e-59 231.5 276 71.7
Sc06g0007370 Simmondsia chinensis HOM05D007062 ORTHO05D008941 2.2e-58 229.9 275 71.6
FvH4_5g00330 Fragaria vesca HOM05D007062 ORTHO05D008941 2.9e-58 229.6 284 72.5
HPP92_003260 Vanilla planifolia HOM05D007062 ORTHO05D008941 1.1e-57 227.6 221 85.5
EL10Ac5g13006 Beta vulgaris HOM05D007062 ORTHO05D008941 3.2e-57 226.1 275 59.3
FAN08G1089 Fragaria x ananassa HOM05D007062 ORTHO05D008941 3.2e-57 226.1 297 70.0
FAN18G0001 Fragaria x ananassa HOM05D007062 ORTHO05D008941 3.2e-57 226.1 297 70.0
CANSAT21G0465 Cannabis sativa HOM05D007062 ORTHO05D008941 7.2e-57 224.9 281 72.2
Aqoxy5G03933 Aquilegia oxysepala HOM05D007062 ORTHO05D008941 1.0e-55 221.1 222 83.8
ATR0568G204 Amborella trichopoda HOM05D007062 ORTHO05D008941 1.4e-55 220.7 196 90.3
Os02g0643500 Oryza sativa ssp. japonica HOM05D007062 ORTHO05D008941 1.4e-55 220.7 215 74.0
SEGI_22381 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 1.8e-55 220.3 244 77.5
vmacro05405 Vaccinium macrocarpon HOM05D007062 ORTHO05D008941 3.9e-55 219.2 196 87.2
FAN04G1528 Fragaria x ananassa HOM05D007062 ORTHO05D008941 4.4e-54 215.7 254 56.3
Sabra03G0078200 Salix brachista HOM05D007062 ORTHO05D008941 1.2e-51 207.6 368 43.2
Mapoly0083s0077 Marchantia polymorpha HOM05D007062 ORTHO05D008941 8.5e-50 201.4 263 59.7
Gohir.A08G172400 Gossypium hirsutum HOM05D007062 ORTHO05D008941 9.4e-49 198.0 193 75.1
AUR62007471 Chenopodium quinoa HOM05D007062 ORTHO05D008941 1.5e-46 190.7 182 83.5
SMO137G0193 Selaginella moellendorffii HOM05D007062 ORTHO05D008941 1.3e-45 187.6 216 63.0
CBR_g19734 Chara braunii HOM05D007062 ORTHO05D008941 2.8e-45 186.4 212 64.2
Pp3c21_17930 Physcomitrium patens HOM05D007062 ORTHO05D008941 1.8e-44 183.7 208 75.5
FAN13G1422 Fragaria x ananassa HOM05D007062 ORTHO05D008941 7.2e-41 171.8 217 54.8
Glyma.01G211100 Glycine max HOM05D007062 ORTHO05D008941 2.1e-40 170.2 237 48.5
Hma1.2p1_1691F.1_g297810 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 1.5e-38 164.1 88 88.6
COL.COLO4_37223 Corchorus olitorius HOM05D007062 ORTHO05D008941 5.7e-38 162.2 90 86.7
DCAR_004919 Daucus carota HOM05D007062 ORTHO05D008941 2.2e-37 160.2 88 87.5
Hma1.2p1_1691F.1_g297800 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 8.3e-37 158.3 85 88.2
CDE04G1356 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 1.8e-36 157.1 85 89.4
AUR62039929 Chenopodium quinoa HOM05D007062 ORTHO05D008941 1.6e-35 154.1 90 83.3
AUR62043761 Chenopodium quinoa HOM05D007062 ORTHO05D008941 1.6e-35 154.1 90 83.3
CARHR012560 Cardamine hirsuta HOM05D007062 ORTHO05D008941 2.0e-35 153.7 85 88.2
Dinv39100 Davidia involucrata HOM05D007062 ORTHO05D008941 8.6e-34 148.3 186 54.8
Cfa012777 Carpinus fangiana HOM05D007062 ORTHO05D008941 1.8e-31 140.6 214 72.4
AagrBONN_evm.TU.Sc2ySwM_228.1920 Anthoceros agrestis HOM05D000741 ORTHO05D000506 2.3e-26 123.6 198 61.1
GSVIVG01001268001 Vitis vinifera HOM05D007062 ORTHO05D008941 2.8e-24 116.7 110 60.9
Haze_08582 Corylus avellana HOM05D007062 ORTHO05D008941 3.6e-24 116.3 143 60.1
Psat2g178680 Pisum sativum HOM05D007062 ORTHO05D008941 6.1e-24 115.5 207 70.0
Nn6g34047 Nelumbo nucifera HOM05D007062 ORTHO05D008941 5.2e-23 112.5 121 55.4
CDE04G0607 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 2.4e-20 103.6 68 76.5
CAN.G1293.1 Capsicum annuum HOM05D007062 ORTHO05D008941 1.6e-19 100.9 59 86.4
COL.COLO4_37221 Corchorus olitorius HOM05D007062 ORTHO05D008941 5.2e-15 85.9 53 77.4
Cre17.g721700 Chlamydomonas reinhardtii HOM05D007062 ORTHO05D008941 2.0e-14 84.0 200 45.0
Lj8A257G61 Lonicera japonica HOM05D007062 ORTHO05D008941 5.8e-14 82.4 45 86.7
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 3.5e-11 73.2 90 52.2
MCO12G419 Micromonas commoda HOM05D007062 ORTHO05D008941 4.6e-11 72.8 44 77.3
SEGI_25676 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 1.6e-08 64.3 40 77.5
MCO04G309 Micromonas commoda HOM05D007062 ORTHO05D008941 1.8e-07 60.8 53 58.5


User provided reference genes

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