Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005596g0010 Nicotiana tabacum HOM05D003089 ORTHO05D003544 1.9e-242 842.0 408 100.0
Nitab4.5_0000336g0120 Nicotiana tabacum HOM05D003089 ORTHO05D003544 6.8e-192 674.1 414 81.9
Peaxi162Scf00684g00421 Petunia axillaris HOM05D003089 ORTHO05D003544 1.3e-187 659.8 440 77.0
Nitab4.5_0000736g0060 Nicotiana tabacum HOM05D003089 ORTHO05D003544 9.5e-186 653.7 440 76.6
CAN.G566.47 Capsicum annuum HOM05D003089 ORTHO05D003544 1.2e-185 653.3 440 76.1
Sopen11g019550 Solanum pennellii HOM05D003089 ORTHO05D003544 6.8e-184 647.5 440 75.5
Solyc11g043130.2 Solanum lycopersicum HOM05D003089 ORTHO05D003544 1.2e-183 646.7 440 75.5
Nitab4.5_0000982g0100 Nicotiana tabacum HOM05D003089 ORTHO05D003544 6.8e-176 620.9 440 73.9
Nitab4.5_0002814g0110 Nicotiana tabacum HOM05D003089 ORTHO05D003544 3.2e-173 612.1 440 73.0
CAN.G638.23 Capsicum annuum HOM05D003089 ORTHO05D003544 1.6e-172 609.8 445 71.2
Peaxi162Scf00242g00019 Petunia axillaris HOM05D003089 ORTHO05D003544 2.2e-166 589.3 445 69.4
Migut.B00253 Erythranthe guttata HOM05D003089 ORTHO05D003544 2.8e-161 572.4 451 66.1
Dinv42085 Davidia involucrata HOM05D003089 ORTHO05D003544 3.4e-159 565.5 453 66.4
SGA_v2.0_scaffold58G20555 Striga asiatica HOM05D003089 ORTHO05D003544 1.1e-157 560.5 451 65.2
MSTRG.20096 Avicennia marina HOM05D003089 ORTHO05D003544 3.2e-157 558.9 449 65.7
Lj9C368G4 Lonicera japonica HOM05D003089 ORTHO05D003544 5.4e-157 558.1 461 65.5
Oeu020770.2 Olea europaea HOM05D003089 ORTHO05D003544 5.4e-157 558.1 454 65.4
CSS0026532 Camellia sinensis var. sinensis HOM05D003089 ORTHO05D003544 3.5e-156 555.4 455 64.4
CSS0027140 Camellia sinensis var. sinensis HOM05D003089 ORTHO05D003544 3.5e-156 555.4 455 64.4
Cc02_g17780 Coffea canephora HOM05D003089 ORTHO05D003544 1.7e-155 553.1 449 64.8
Rhsim11G0174300 Rhododendron simsii HOM05D003089 ORTHO05D003544 2.1e-153 546.2 456 62.7
SalBow6G2407 Salvia bowleyana HOM05D003089 ORTHO05D003544 8.1e-153 544.3 468 61.8
SalBow6G4859 Salvia bowleyana HOM05D003089 ORTHO05D003544 8.1e-153 544.3 468 61.8
Actinidia00513 Actinidia chinensis HOM05D003089 ORTHO05D003544 3.1e-152 542.3 456 62.3
SGA_v2.0_scaffold32G13157 Striga asiatica HOM05D003089 ORTHO05D003544 9.0e-152 540.8 479 60.8
GSVIVG01031931001 Vitis vinifera HOM05D003089 ORTHO05D003544 4.9e-150 535.0 452 63.3
QL11p043039 Quercus lobata HOM05D003089 ORTHO05D003544 1.1e-149 533.9 454 63.0
Haze_02363 Corylus avellana HOM05D003089 ORTHO05D003544 1.6e-148 530.0 455 62.4
DCAR_003639 Daucus carota HOM05D003089 ORTHO05D003544 2.1e-148 529.6 458 61.1
unitig_61.g25998 Utricularia gibba HOM05D003089 ORTHO05D003544 3.0e-147 525.8 449 60.8
Cpa.g.sc62.125 Carica papaya HOM05D003089 ORTHO05D003544 3.9e-147 525.4 454 63.2
Nn3g17070 Nelumbo nucifera HOM05D003089 ORTHO05D003544 7.4e-146 521.2 456 60.3
Thecc.02G123600 Theobroma cacao HOM05D003089 ORTHO05D003544 1.6e-145 520.0 453 60.7
CANSAT25G2870 Cannabis sativa HOM05D003089 ORTHO05D003544 1.1e-144 517.3 456 62.1
Ciclev10027664m.g Citrus clementina HOM05D003089 ORTHO05D003544 1.8e-144 516.5 458 61.8
CiPaw.06G137000 Carya illinoinensis HOM05D003089 ORTHO05D003544 2.4e-144 516.2 451 60.1
Duzib132G0336 Durio zibethinus HOM05D003089 ORTHO05D003544 2.4e-144 516.2 453 60.7
TAR369G0923 Trochodendron aralioides HOM05D003089 ORTHO05D003544 5.3e-144 515.0 458 60.5
FvH4_2g08470 Fragaria vesca HOM05D003089 ORTHO05D003544 3.4e-143 512.3 457 60.8
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 5.8e-143 511.5 457 59.7
vmacro02128 Vaccinium macrocarpon HOM05D003089 ORTHO05D003544 7.6e-143 511.1 509 54.8
RcHm_v2.0_Chr6g0263811 Rosa chinensis HOM05D003089 ORTHO05D003544 9.9e-143 510.8 457 61.5
Potri.004G152400 Populus trichocarpa HOM05D003089 ORTHO05D003544 1.7e-142 510.0 454 60.1
Prupe.8G100100 Prunus persica HOM05D003089 ORTHO05D003544 1.7e-142 510.0 457 60.6
Lj1g0018032 Lotus japonicus HOM05D003089 ORTHO05D003544 2.9e-142 509.2 453 60.7
MD05G1068200 Malus domestica HOM05D003089 ORTHO05D003544 2.9e-142 509.2 457 60.2
Gorai.012G146100 Gossypium raimondii HOM05D003089 ORTHO05D003544 3.8e-142 508.8 451 59.4
FAN24G1972 Fragaria x ananassa HOM05D003089 ORTHO05D003544 6.4e-142 508.1 457 60.4
FAN24G2674 Fragaria x ananassa HOM05D003089 ORTHO05D003544 6.4e-142 508.1 457 60.4
Carub.0001s3852 Capsella rubella HOM05D003089 ORTHO05D003544 8.4e-142 507.7 454 59.3
Gohir.D04G158700 Gossypium hirsutum HOM05D003089 ORTHO05D003544 8.4e-142 507.7 451 59.4
Duzib052G1069 Durio zibethinus HOM05D003089 ORTHO05D003544 1.1e-141 507.3 462 59.3
Thhalv10011177m.g Eutrema salsugineum HOM05D003089 ORTHO05D003544 1.1e-141 507.3 454 59.0
FAN27G3350 Fragaria x ananassa HOM05D003089 ORTHO05D003544 1.9e-141 506.5 457 60.4
Medtr3g116250 Medicago truncatula HOM05D003089 ORTHO05D003544 1.9e-141 506.5 454 60.4
AL1G56300 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 3.2e-141 505.8 454 59.0
A06p03880 Brassica napus HOM05D003089 ORTHO05D003544 3.2e-141 505.8 454 59.3
BraA06t23597Z Brassica rapa HOM05D003089 ORTHO05D003544 3.2e-141 505.8 454 59.3
Sp1g36200 Schrenkiella parvula HOM05D003089 ORTHO05D003544 4.2e-141 505.4 454 59.3
FAN15G0570 Fragaria x ananassa HOM05D003089 ORTHO05D003544 5.5e-141 505.0 457 60.6
AT1G49340 Arabidopsis thaliana HOM05D003089 ORTHO05D003544 9.3e-141 504.2 454 58.8
Manes.15G165000 Manihot esculenta HOM05D003089 ORTHO05D003544 9.3e-141 504.2 456 61.2
Eucgr.G00451 Eucalyptus grandis HOM05D003089 ORTHO05D003544 1.2e-140 503.8 455 58.2
Lsat_1_v5_gn_9_109381 Lactuca sativa HOM05D003089 ORTHO05D003544 1.6e-140 503.4 447 59.3
PGR042G2422 Punica granatum HOM05D003089 ORTHO05D003544 1.6e-140 503.4 453 60.5
Aa31LG10G4610 Aethionema arabicum HOM05D003089 ORTHO05D003544 2.1e-140 503.1 454 58.6
BcaC08g43133 Brassica carinata HOM05D003089 ORTHO05D003544 2.1e-140 503.1 454 58.8
Lalb_Chr08g0246561 Lupinus albus HOM05D003089 ORTHO05D003544 2.1e-140 503.1 452 60.6
TAR622G0009 Trochodendron aralioides HOM05D003089 ORTHO05D003544 2.1e-140 503.1 458 59.6
C06p04080 Brassica napus HOM05D003089 ORTHO05D003544 2.7e-140 502.7 454 58.8
BolC6t35540H Brassica oleracea HOM05D003089 ORTHO05D003544 2.7e-140 502.7 454 58.8
BcaB02g11071 Brassica carinata HOM05D003089 ORTHO05D003544 4.6e-140 501.9 454 58.6
A05p20670 Brassica napus HOM05D003089 ORTHO05D003544 4.6e-140 501.9 454 58.6
BraA05t20975Z Brassica rapa HOM05D003089 ORTHO05D003544 4.6e-140 501.9 454 58.6
TWI75G1044 Tripterygium wilfordii HOM05D003089 ORTHO05D003544 4.6e-140 501.9 452 60.4
BcaB07g33678 Brassica carinata HOM05D003089 ORTHO05D003544 6.0e-140 501.5 454 58.8
Ca_15379_v3 Cicer arietinum L. HOM05D003089 ORTHO05D003544 7.9e-140 501.1 453 59.4
HanXRQChr08g0216591 Helianthus annuus HOM05D003089 ORTHO05D003544 7.9e-140 501.1 458 58.5
MD10G1078200 Malus domestica HOM05D003089 ORTHO05D003544 7.9e-140 501.1 457 59.1
Psat5g008280 Pisum sativum HOM05D003089 ORTHO05D003544 1.0e-139 500.7 453 59.6
Potri.009G113700 Populus trichocarpa HOM05D003089 ORTHO05D003544 1.0e-139 500.7 453 59.8
TPR.G38232 Trifolium pratense HOM05D003089 ORTHO05D003544 1.0e-139 500.7 454 60.1
Gohir.A04G117000 Gossypium hirsutum HOM05D003089 ORTHO05D003544 1.8e-139 500.0 451 59.0
Sed0019364 Sechium edule HOM05D003089 ORTHO05D003544 2.3e-139 499.6 456 57.9
Glyma.06G013800 Glycine max HOM05D003089 ORTHO05D003544 3.0e-139 499.2 453 59.8
Sc18g0004600 Simmondsia chinensis HOM05D003089 ORTHO05D003544 3.9e-139 498.8 456 58.6
Phvul.009G009000 Phaseolus vulgaris HOM05D003089 ORTHO05D003544 6.7e-139 498.0 453 59.6
BcaC05g27516 Brassica carinata HOM05D003089 ORTHO05D003544 1.1e-138 497.3 454 57.7
C05p34900 Brassica napus HOM05D003089 ORTHO05D003544 1.1e-138 497.3 454 57.7
CARHR039330 Cardamine hirsuta HOM05D003089 ORTHO05D003544 1.1e-138 497.3 454 58.8
Sabra04G0101100 Salix brachista HOM05D003089 ORTHO05D003544 1.5e-138 496.9 478 56.9
Glyma.04G013900 Glycine max HOM05D003089 ORTHO05D003544 1.9e-138 496.5 453 59.8
ECA234G4407 Erigeron canadensis HOM05D003089 ORTHO05D003544 2.5e-138 496.1 456 57.7
Sabra09G0087300 Salix brachista HOM05D003089 ORTHO05D003544 2.5e-138 496.1 453 58.7
ClCG02G005170 Citrullus lanatus HOM05D003089 ORTHO05D003544 4.3e-138 495.4 456 57.7
BolC5t32215H Brassica oleracea HOM05D003089 ORTHO05D003544 1.3e-137 493.8 454 57.5
CsaV3_7G023410 Cucumis sativus L. HOM05D003089 ORTHO05D003544 8.2e-137 491.1 453 57.4
Lsat_1_v5_gn_5_118040 Lactuca sativa HOM05D003089 ORTHO05D003544 8.2e-137 491.1 454 58.4
MELO3C012545.2 Cucumis melo HOM05D003089 ORTHO05D003544 1.1e-136 490.7 456 57.0
VMungo1309G0726 Vigna mungo HOM05D003089 ORTHO05D003544 4.0e-136 488.8 454 58.6
Lalb_Chr23g0265471 Lupinus albus HOM05D003089 ORTHO05D003544 2.6e-135 486.1 452 58.4
Ah.01g019560 Amaranthus hybridus HOM05D003089 ORTHO05D003544 3.4e-135 485.7 451 59.0
THA.LOC104804915 Tarenaya hassleriana HOM05D003089 ORTHO05D003544 3.4e-135 485.7 454 57.9
MBI03_g27663_MAGBIO Magnolia biondii HOM05D003089 ORTHO05D003544 4.5e-135 485.3 460 58.3
HanXRQChr10g0307291 Helianthus annuus HOM05D003089 ORTHO05D003544 2.2e-134 483.0 469 56.1
PSO161G0089 Papaver somniferum HOM05D003089 ORTHO05D003544 1.1e-133 480.7 456 58.3
arahy.Tifrunner.gnm1.ann1.U64SVT Arachis hypogaea HOM05D003089 ORTHO05D003544 3.2e-133 479.2 452 58.0
HPP92_026531 Vanilla planifolia HOM05D003089 ORTHO05D003544 9.3e-133 477.6 446 55.4
Sed0010503 Sechium edule HOM05D003089 ORTHO05D003544 2.1e-132 476.5 454 55.1
PSO478G0141 Papaver somniferum HOM05D003089 ORTHO05D003544 2.7e-132 476.1 455 57.6
ATR0749G081 Amborella trichopoda HOM05D003089 ORTHO05D003544 7.9e-132 474.6 456 56.4
arahy.Tifrunner.gnm1.ann1.AHB8GW Arachis hypogaea HOM05D003089 ORTHO05D003544 7.9e-132 474.6 452 58.0
ClCG11G004530 Citrullus lanatus HOM05D003089 ORTHO05D003544 1.1e-130 470.7 453 56.3
EL10Ac9g21746 Beta vulgaris HOM05D003089 ORTHO05D003544 2.5e-130 469.5 450 57.1
Aqoxy3G03189 Aquilegia oxysepala HOM05D003089 ORTHO05D003544 5.7e-130 468.4 448 56.2
CANSAT21G0290 Cannabis sativa HOM05D003089 ORTHO05D003544 9.7e-130 467.6 447 57.9
Hund06224 Selenicereus undatus HOM05D003089 ORTHO05D003544 1.6e-129 466.8 452 57.5
Lj5C199G5 Lonicera japonica HOM05D003089 ORTHO05D003544 3.7e-129 465.7 442 57.2
CsaV3_2G014550 Cucumis sativus L. HOM05D003089 ORTHO05D003544 3.1e-128 462.6 453 55.6
Gohir.A03G179500 Gossypium hirsutum HOM05D003089 ORTHO05D003544 2.2e-126 456.4 453 54.1
Hund00286 Selenicereus undatus HOM05D003089 ORTHO05D003544 3.8e-126 455.7 458 55.7
Gorai.005G228400 Gossypium raimondii HOM05D003089 ORTHO05D003544 6.5e-126 454.9 453 54.1
Gohir.D02G202895 Gossypium hirsutum HOM05D003089 ORTHO05D003544 8.5e-126 454.5 453 53.9
AUR62016712 Chenopodium quinoa HOM05D003089 ORTHO05D003544 1.1e-125 454.1 447 56.6
Zm00001eb216400 Zea mays HOM05D003089 ORTHO05D003544 2.1e-124 449.9 442 55.2
CSS0001432 Camellia sinensis var. sinensis HOM05D003089 ORTHO05D003544 1.8e-123 446.8 343 66.5
Aa31LG10G3360 Aethionema arabicum HOM05D003089 ORTHO05D003544 3.9e-123 445.7 442 54.5
Carub.0001s3993 Capsella rubella HOM05D003089 ORTHO05D003544 1.7e-121 440.3 442 53.2
AL4G25950 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 3.7e-121 439.1 446 53.8
SHI05424 Sapria himalayana HOM05D003089 ORTHO05D003544 4.1e-120 435.6 482 49.6
BcaB07g33546 Brassica carinata HOM05D003089 ORTHO05D003544 7.7e-119 431.4 442 53.6
HPP92_026558 Vanilla planifolia HOM05D003089 ORTHO05D003544 1.4e-117 427.2 482 49.6
Sp1g37760 Schrenkiella parvula HOM05D003089 ORTHO05D003544 2.5e-117 426.4 442 52.7
A06p02740 Brassica napus HOM05D003089 ORTHO05D003544 2.1e-116 423.3 441 53.3
BcaC08g43274 Brassica carinata HOM05D003089 ORTHO05D003544 5.7e-114 415.2 440 52.3
BraA06t23482Z Brassica rapa HOM05D003089 ORTHO05D003544 5.7e-114 415.2 441 53.1
AUR62011350 Chenopodium quinoa HOM05D003089 ORTHO05D003544 4.8e-113 412.1 456 52.2
C06p06220 Brassica napus HOM05D003089 ORTHO05D003544 8.2e-113 411.4 441 52.2
BolC6t35733H Brassica oleracea HOM05D003089 ORTHO05D003544 8.2e-113 411.4 441 52.2
vmacro02129 Vaccinium macrocarpon HOM05D003089 ORTHO05D003544 4.1e-104 382.5 399 53.4
Atru.chr5.2983 Acer truncatum HOM05D003089 ORTHO05D003544 8.5e-102 374.8 320 62.5
COL.COLO4_32443 Corchorus olitorius HOM05D003089 ORTHO05D003544 2.5e-101 373.2 455 49.7
Thhalv10012090m.g Eutrema salsugineum HOM05D003089 ORTHO05D003544 1.8e-99 367.1 392 52.0
CDE04G2374 Ceratophyllum demersum HOM05D003089 ORTHO05D003544 4.0e-99 365.9 355 55.5
Mapoly0001s0451 Marchantia polymorpha HOM05D003089 ORTHO05D003544 6.5e-94 348.6 443 44.5
Lalb_Chr00c44g0412571 Lupinus albus HOM05D003089 ORTHO05D003544 5.7e-90 335.5 269 65.1
Mapoly0001s0228 Marchantia polymorpha HOM05D003089 ORTHO05D003544 7.5e-90 335.1 460 44.1
SMO116G0267 Selaginella moellendorffii HOM05D003089 ORTHO05D003544 4.8e-89 332.4 448 44.9
AagrBONN_evm.TU.Sc2ySwM_344.1888 Anthoceros agrestis HOM05D003089 ORTHO05D003544 1.8e-88 330.5 467 41.1
Nn1g03865 Nelumbo nucifera HOM05D003089 ORTHO05D003544 1.8e-80 303.9 238 63.9
Pp3c5_19540 Physcomitrium patens HOM05D003089 ORTHO05D003544 8.6e-78 295.0 465 38.7
CSS0034967 Camellia sinensis var. sinensis HOM05D003089 ORTHO05D003544 1.6e-76 290.8 226 66.4
Cc03_g13160 Coffea canephora HOM05D003089 ORTHO05D003544 3.1e-75 286.6 187 74.3
Pp3c22_1940 Physcomitrium patens HOM05D003089 ORTHO05D003544 4.0e-75 286.2 444 39.9
CBR_g31025 Chara braunii HOM05D003089 ORTHO05D003544 4.9e-65 252.7 474 33.8
Peaxi162Scf00242g00009 Petunia axillaris HOM05D003089 ORTHO05D003544 2.1e-63 247.3 442 41.2
Lsat_1_v5_gn_5_127261 Lactuca sativa HOM05D003089 ORTHO05D003544 1.2e-58 231.5 304 45.1
Nn4g22984 Nelumbo nucifera HOM05D003089 ORTHO05D003544 4.6e-55 219.5 232 53.4
MBI16_g11568_MAGBIO Magnolia biondii HOM05D003089 ORTHO05D003544 5.8e-50 202.6 176 59.7
MBI16_g11567_MAGBIO Magnolia biondii HOM05D003089 ORTHO05D003544 4.3e-29 133.3 180 44.4
AL325U10010 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 6.2e-28 129.4 127 56.7
Lsat_1_v5_gn_8_45721 Lactuca sativa HOM05D003089 ORTHO05D003544 3.2e-24 117.1 99 57.6
Lsat_1_v5_gn_6_86720 Lactuca sativa HOM05D003089 ORTHO05D001202 1.1e-21 108.6 103 54.4
Lsat_1_v5_gn_2_102140 Lactuca sativa HOM05D003089 ORTHO05D003544 1.6e-20 104.8 117 47.9
Lsat_1_v5_gn_8_66001 Lactuca sativa HOM05D003089 ORTHO05D003544 6.2e-20 102.8 63 71.4
Atru.chr5.2984 Acer truncatum HOM05D003089 ORTHO05D003544 2.4e-19 100.9 109 51.4
Lsat_1_v5_gn_5_122700 Lactuca sativa HOM05D003089 ORTHO05D003544 4.1e-19 100.1 64 71.9
Lsat_1_v5_gn_7_80801 Lactuca sativa HOM05D003089 ORTHO05D003544 3.5e-15 87.0 155 37.4
Os03g0711200 Oryza sativa ssp. japonica HOM05D003089 ORTHO05D003544 3.0e-14 84.0 76 56.6
CDE04G3709 Ceratophyllum demersum HOM05D003089 ORTHO05D003544 6.7e-14 82.8 71 60.6
Lsat_1_v5_gn_6_56301 Lactuca sativa HOM05D001292 ORTHO05D001202 8.7e-14 82.4 123 40.7
Lsat_1_v5_gn_3_48181 Lactuca sativa HOM05D003089 ORTHO05D003544 6.9e-11 72.8 75 54.7
vmacro02130 Vaccinium macrocarpon HOM05D003089 ORTHO05D003544 1.5e-10 71.6 52 67.3
Lsat_1_v5_gn_6_71821 Lactuca sativa HOM05D003089 ORTHO05D003544 4.5e-10 70.1 75 53.3
Cfa027017 Carpinus fangiana HOM05D003089 ORTHO05D003544 2.3e-06 57.8 327 21.1


User provided reference genes

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