Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005539g0060 Nicotiana tabacum HOM05D003431 ORTHO05D005152 7.2e-107 390.6 197 100.0
Nitab4.5_0010140g0020 Nicotiana tabacum HOM05D003431 ORTHO05D005152 6.6e-100 367.5 226 85.8
Solyc01g104470.3 Solanum lycopersicum HOM05D003431 ORTHO05D005152 3.4e-96 355.1 230 81.7
Sopen01g046970 Solanum pennellii HOM05D003431 ORTHO05D005152 2.9e-95 352.1 230 80.9
PGSC0003DMG400023745 Solanum tuberosum HOM05D003431 ORTHO05D005152 3.7e-95 351.7 230 80.9
Peaxi162Scf00011g00014 Petunia axillaris HOM05D003431 ORTHO05D005152 7.8e-93 344.0 230 78.7
Oeu000195.1 Olea europaea HOM05D003431 ORTHO05D005152 1.2e-88 330.1 230 74.3
CSS0006665 Camellia sinensis var. sinensis HOM05D003431 ORTHO05D005152 3.4e-88 328.6 230 73.9
Dinv24261 Davidia involucrata HOM05D003431 ORTHO05D005152 5.8e-88 327.8 230 72.6
SGA_v2.0_scaffold1G00326 Striga asiatica HOM05D003431 ORTHO05D005152 1.7e-87 326.2 230 72.6
DCAR_013995 Daucus carota HOM05D003431 ORTHO05D005152 3.7e-87 325.1 230 73.0
Hma1.2p1_0557F.1_g178330 Hydrangea macrophylla HOM05D003431 ORTHO05D005152 6.4e-87 324.3 230 71.3
Hma1.2p1_2850F.1_g329406 Hydrangea macrophylla HOM05D003431 ORTHO05D005152 6.4e-87 324.3 230 71.3
SalBow6G0908 Salvia bowleyana HOM05D003431 ORTHO05D005152 6.4e-87 324.3 230 73.9
vmacro01777 Vaccinium macrocarpon HOM05D003431 ORTHO05D005152 1.9e-86 322.8 231 71.9
MSTRG.16533 Avicennia marina HOM05D003431 ORTHO05D005152 2.4e-86 322.4 230 72.2
Cc02_g22270 Coffea canephora HOM05D003431 ORTHO05D005152 5.4e-86 321.2 230 72.6
Gohir.D01G167700 Gossypium hirsutum HOM05D003431 ORTHO05D005152 7.0e-86 320.9 230 72.2
Gorai.002G208400 Gossypium raimondii HOM05D003431 ORTHO05D005152 2.1e-85 319.3 230 71.7
CDE12G0598 Ceratophyllum demersum HOM05D003431 ORTHO05D005152 4.6e-85 318.2 230 70.0
TAR633G0411 Trochodendron aralioides HOM05D003431 ORTHO05D005152 6.0e-85 317.8 230 70.4
Atru.chr6.1079 Acer truncatum HOM05D003431 ORTHO05D005152 7.8e-85 317.4 230 70.9
arahy.Tifrunner.gnm1.ann1.I5HCXG Arachis hypogaea HOM05D003431 ORTHO05D005152 7.8e-85 317.4 230 72.2
Glyma.08G184300 Glycine max HOM05D003431 ORTHO05D005152 1.0e-84 317.0 230 72.2
Lsat_1_v5_gn_7_77981 Lactuca sativa HOM05D003431 ORTHO05D005152 1.3e-84 316.6 230 70.9
Atru.chr6.1030 Acer truncatum HOM05D003431 ORTHO05D005152 1.7e-84 316.2 230 70.9
Glyma.15G048200 Glycine max HOM05D003431 ORTHO05D005152 1.7e-84 316.2 230 72.2
HanXRQChr01g0021831 Helianthus annuus HOM05D003431 ORTHO05D005152 1.7e-84 316.2 230 70.4
MBI15_g28822_MAGBIO Magnolia biondii HOM05D003431 ORTHO05D005152 1.7e-84 316.2 230 70.4
Lj6g0011327 Lotus japonicus HOM05D003431 ORTHO05D005152 3.0e-84 315.5 230 72.2
Sabra11G0143500 Salix brachista HOM05D003431 ORTHO05D005152 3.0e-84 315.5 230 70.0
GSVIVG01023018001 Vitis vinifera HOM05D003431 ORTHO05D005152 3.0e-84 315.5 230 70.4
TWI14G0641 Tripterygium wilfordii HOM05D003431 ORTHO05D005152 3.9e-84 315.1 230 70.4
Duzib132G0664 Durio zibethinus HOM05D003431 ORTHO05D005152 5.1e-84 314.7 230 70.9
Migut.B00667 Erythranthe guttata HOM05D003431 ORTHO05D005152 5.1e-84 314.7 230 70.0
Sc11g0006640 Simmondsia chinensis HOM05D003431 ORTHO05D005152 5.1e-84 314.7 230 71.7
HanXRQChr03g0066511 Helianthus annuus HOM05D003431 ORTHO05D005152 1.1e-83 313.5 230 70.0
Potri.011G156300 Populus trichocarpa HOM05D003431 ORTHO05D005152 1.1e-83 313.5 230 69.6
PSO017G6291 Papaver somniferum HOM05D003431 ORTHO05D005152 1.5e-83 313.2 230 70.4
Actinidia39056 Actinidia chinensis HOM05D003431 ORTHO05D005152 1.9e-83 312.8 230 71.3
PSO170G4153 Papaver somniferum HOM05D003431 ORTHO05D005152 1.9e-83 312.8 230 70.4
Rhsim11G0131700 Rhododendron simsii HOM05D003431 ORTHO05D005152 1.9e-83 312.8 231 71.0
Gohir.A01G176900 Gossypium hirsutum HOM05D003431 ORTHO05D005152 2.5e-83 312.4 230 71.3
TWI23G0077 Tripterygium wilfordii HOM05D003431 ORTHO05D005152 2.5e-83 312.4 230 70.0
Manes.10G132200 Manihot esculenta HOM05D003431 ORTHO05D005152 3.3e-83 312.0 230 70.0
Duzib248G1379 Durio zibethinus HOM05D003431 ORTHO05D005152 5.6e-83 311.2 228 70.2
Aqoxy4G02442 Aquilegia oxysepala HOM05D003431 ORTHO05D005152 7.3e-83 310.8 230 69.1
ECA236G3864 Erigeron canadensis HOM05D003431 ORTHO05D005152 1.2e-82 310.1 230 69.6
Hma1.2p1_0557F.1_g178340 Hydrangea macrophylla HOM05D003431 ORTHO05D005152 1.2e-82 310.1 220 70.5
Thecc.02G041300 Theobroma cacao HOM05D003431 ORTHO05D005152 1.6e-82 309.7 230 69.1
Haze_13054 Corylus avellana HOM05D003431 ORTHO05D005152 3.6e-82 308.5 230 69.6
Lj9A308T36 Lonicera japonica HOM05D003431 ORTHO05D005152 3.6e-82 308.5 230 69.1
Manes.07G013300 Manihot esculenta HOM05D003431 ORTHO05D005152 3.6e-82 308.5 230 70.9
Cfa014508 Carpinus fangiana HOM05D003431 ORTHO05D005152 4.7e-82 308.1 230 69.6
Sabra16G0311800 Salix brachista HOM05D003431 ORTHO05D005152 4.7e-82 308.1 230 69.6
Potri.001G460100 Populus trichocarpa HOM05D003431 ORTHO05D005152 8.1e-82 307.4 230 68.7
Cpa.g.sc2.27 Carica papaya HOM05D003431 ORTHO05D005152 1.1e-81 307.0 230 69.1
VMungo0540G2199 Vigna mungo HOM05D003431 ORTHO05D005152 1.4e-81 306.6 230 69.6
MD08G1225200 Malus domestica HOM05D003431 ORTHO05D005152 2.3e-81 305.8 230 69.1
Eucgr.I02710 Eucalyptus grandis HOM05D003431 ORTHO05D005152 3.1e-81 305.4 230 69.1
Ciclev10002376m.g Citrus clementina HOM05D003431 ORTHO05D005152 4.0e-81 305.1 229 69.9
Prupe.1G562900 Prunus persica HOM05D003431 ORTHO05D005152 4.0e-81 305.1 230 69.6
Thhalv10008680m.g Eutrema salsugineum HOM05D003431 ORTHO05D005152 5.2e-81 304.7 230 67.8
PSO339G0293 Papaver somniferum HOM05D003431 ORTHO05D005152 5.2e-81 304.7 230 68.3
PSO801G0645 Papaver somniferum HOM05D003431 ORTHO05D005152 5.2e-81 304.7 230 68.3
BcaC01g01674 Brassica carinata HOM05D003431 ORTHO05D005152 6.8e-81 304.3 230 67.8
MD15G1418800 Malus domestica HOM05D003431 ORTHO05D005152 6.8e-81 304.3 230 68.7
unitig_22.g6119 Utricularia gibba HOM05D003431 ORTHO05D005152 6.8e-81 304.3 228 67.5
BcaB03g12039 Brassica carinata HOM05D003431 ORTHO05D005152 8.9e-81 303.9 230 68.3
CAN.G1352.24 Capsicum annuum HOM05D003431 ORTHO05D005152 8.9e-81 303.9 265 64.2
A09p39090 Brassica napus HOM05D003431 ORTHO05D005152 2.6e-80 302.4 230 67.8
BraA09t39409Z Brassica rapa HOM05D003431 ORTHO05D005152 2.6e-80 302.4 230 67.8
Ca_00090_v3 Cicer arietinum L. HOM05D003431 ORTHO05D005152 2.6e-80 302.4 230 69.1
Ca_29929_v3 Cicer arietinum L. HOM05D003431 ORTHO05D005152 2.6e-80 302.4 230 69.1
CiPaw.06G149000 Carya illinoinensis HOM05D003431 ORTHO05D005152 4.4e-80 301.6 230 68.7
Phvul.006G212200 Phaseolus vulgaris HOM05D003431 ORTHO05D005152 4.4e-80 301.6 230 68.7
BcaC05g26486 Brassica carinata HOM05D003431 ORTHO05D005152 9.9e-80 300.4 228 67.5
A07p12440 Brassica napus HOM05D003431 ORTHO05D005152 9.9e-80 300.4 230 68.3
C05p25340 Brassica napus HOM05D003431 ORTHO05D005152 9.9e-80 300.4 228 67.5
BraA07t29025Z Brassica rapa HOM05D003431 ORTHO05D005152 9.9e-80 300.4 230 68.3
Sp1g23030 Schrenkiella parvula HOM05D003431 ORTHO05D005152 9.9e-80 300.4 230 67.8
BcaC05g26690 Brassica carinata HOM05D003431 ORTHO05D005152 1.7e-79 299.7 230 67.4
Lalb_Chr18g0060821 Lupinus albus HOM05D003431 ORTHO05D005152 2.2e-79 299.3 227 67.4
QL02p098641 Quercus lobata HOM05D003431 ORTHO05D005152 2.9e-79 298.9 229 67.2
BolC3t19610H Brassica oleracea HOM05D003431 ORTHO05D005152 3.7e-79 298.5 225 68.0
AUR62020868 Chenopodium quinoa HOM05D003431 ORTHO05D005152 3.7e-79 298.5 230 66.5
Psat1g220040 Pisum sativum HOM05D003431 ORTHO05D005152 3.7e-79 298.5 230 67.4
CANSAT11G1865 Cannabis sativa HOM05D003431 ORTHO05D005152 4.9e-79 298.1 230 67.0
Aa31LG7G9280 Aethionema arabicum HOM05D003431 ORTHO05D005152 6.4e-79 297.7 230 67.8
BraA08t34627Z Brassica rapa HOM05D003431 ORTHO05D005152 8.3e-79 297.4 225 68.0
PGR142G4046 Punica granatum HOM05D003431 ORTHO05D005152 8.3e-79 297.4 230 67.4
Hund24426 Selenicereus undatus HOM05D003431 ORTHO05D005152 1.1e-78 297.0 233 68.7
EL10Ac3g07449 Beta vulgaris HOM05D003431 ORTHO05D005152 1.4e-78 296.6 230 67.8
A08p26810 Brassica napus HOM05D003431 ORTHO05D005152 2.4e-78 295.8 222 68.0
BolC5t31269H Brassica oleracea HOM05D003431 ORTHO05D005152 2.4e-78 295.8 228 67.1
RcHm_v2.0_Chr7g0224251 Rosa chinensis HOM05D003431 ORTHO05D005152 3.2e-78 295.4 230 66.5
AUR62018551 Chenopodium quinoa HOM05D003431 ORTHO05D005152 7.1e-78 294.3 230 66.1
CiPaw.05G042700 Carya illinoinensis HOM05D003431 ORTHO05D005152 9.2e-78 293.9 219 70.3
C03p73140 Brassica napus HOM05D003431 ORTHO05D005152 2.1e-77 292.7 222 67.1
BcaB03g14023 Brassica carinata HOM05D003431 ORTHO05D005152 4.6e-77 291.6 238 64.7
CARHR026300 Cardamine hirsuta HOM05D003431 ORTHO05D005152 4.6e-77 291.6 230 66.1
FAN08G2387 Fragaria x ananassa HOM05D003431 ORTHO05D005152 6.0e-77 291.2 230 65.2
C07p18390 Brassica napus HOM05D003431 ORTHO05D005152 1.0e-76 290.4 222 68.0
FAN13G1098 Fragaria x ananassa HOM05D003431 ORTHO05D005152 1.3e-76 290.0 230 64.8
HPP92_026977 Vanilla planifolia HOM05D003431 ORTHO05D005152 1.1e-75 287.0 230 65.7
BcaC06g35235 Brassica carinata HOM05D003431 ORTHO05D005152 1.5e-75 286.6 253 61.7
Medtr2g007780 Medicago truncatula HOM05D003431 ORTHO05D005152 3.3e-75 285.4 228 65.8
THA.LOC104807949 Tarenaya hassleriana HOM05D003431 ORTHO05D005152 5.6e-75 284.6 226 66.8
HPP92_015419 Vanilla planifolia HOM05D003431 ORTHO05D005152 5.6e-75 284.6 230 65.7
TPR.G39937 Trifolium pratense HOM05D003431 ORTHO05D005152 9.6e-75 283.9 227 64.8
BolC7t42349H Brassica oleracea HOM05D003431 ORTHO05D005152 1.6e-74 283.1 230 65.7
AL1G40100 Arabidopsis lyrata HOM05D003431 ORTHO05D005152 2.8e-74 282.3 230 65.2
Carub.0001s2531 Capsella rubella HOM05D003431 ORTHO05D005152 8.1e-74 280.8 230 63.9
Sed0006026 Sechium edule HOM05D003431 ORTHO05D005152 1.1e-73 280.4 230 62.6
Sed0002836 Sechium edule HOM05D003431 ORTHO05D005152 3.1e-73 278.9 230 62.2
AT1G25260 Arabidopsis thaliana HOM05D003431 ORTHO05D005152 1.2e-72 276.9 236 63.1
ATR0174G027 Amborella trichopoda HOM05D003431 ORTHO05D005152 2.6e-72 275.8 220 62.7
CsaV3_2G018120 Cucumis sativus L. HOM05D003431 ORTHO05D005152 1.7e-71 273.1 230 60.9
Lsat_1_v5_gn_9_116360 Lactuca sativa HOM05D003431 ORTHO05D005152 1.1e-70 270.4 204 69.1
ClCG02G000650 Citrullus lanatus HOM05D003431 ORTHO05D005152 1.2e-69 266.9 229 61.6
TAR636G0765 Trochodendron aralioides HOM05D003431 ORTHO05D005152 2.3e-68 262.7 230 62.2
arahy.Tifrunner.gnm1.ann1.N8P1ZJ Arachis hypogaea HOM05D003431 ORTHO05D005152 2.8e-66 255.8 193 71.5
Zm00001eb094240 Zea mays HOM05D003431 ORTHO05D005152 2.8e-66 255.8 222 60.4
Zm00001eb163260 Zea mays HOM05D003431 ORTHO05D005152 1.8e-65 253.1 222 59.5
CDE06G1320 Ceratophyllum demersum HOM05D003431 ORTHO05D005152 2.4e-65 252.7 191 68.6
Nn2g13208 Nelumbo nucifera HOM05D003431 ORTHO05D005152 3.4e-64 248.8 191 67.5
Os11g0105400 Oryza sativa ssp. japonica HOM05D003431 ORTHO05D005152 5.8e-64 248.1 229 56.3
Pp3c11_25500 Physcomitrium patens HOM05D003431 ORTHO05D005152 5.8e-64 248.1 217 56.2
SMO367G0584 Selaginella moellendorffii HOM05D003431 ORTHO05D005152 9.9e-64 247.3 218 56.4
Pp3s128_30 Physcomitrium patens HOM05D003431 ORTHO05D005152 2.9e-63 245.7 217 55.8
AagrBONN_evm.TU.Sc2ySwM_369.396 Anthoceros agrestis HOM05D003431 ORTHO05D005152 4.9e-63 245.0 229 54.6
FAN04G1904 Fragaria x ananassa HOM05D003431 ORTHO05D005152 1.1e-62 243.8 219 59.8
FvH4_5g30060 Fragaria vesca HOM05D003431 ORTHO05D005152 3.2e-62 242.3 193 64.8
FAN18G1423 Fragaria x ananassa HOM05D003431 ORTHO05D005152 1.6e-61 240.0 191 64.9
SHI16687 Sapria himalayana HOM05D003431 ORTHO05D005152 2.1e-61 239.6 212 61.8
Mapoly0015s0017 Marchantia polymorpha HOM05D003431 ORTHO05D005152 2.7e-61 239.2 219 56.6
Ah.04g149460 Amaranthus hybridus HOM05D003431 ORTHO05D005152 6.0e-61 238.0 208 64.4
Os12g0105200 Oryza sativa ssp. japonica HOM05D003431 ORTHO05D005152 1.3e-60 236.9 221 55.7
CBR_g26270 Chara braunii HOM05D003431 ORTHO05D005152 2.8e-58 229.2 215 54.9
Hma1.2p1_0217F.1_g091920 Hydrangea macrophylla HOM05D003431 ORTHO05D005152 2.2e-55 219.5 156 67.9
SGA_v2.0_scaffold110G31286 Striga asiatica HOM05D003431 ORTHO05D005152 2.3e-52 209.5 190 57.4
Oeu026055.1 Olea europaea HOM05D003431 ORTHO05D005152 3.5e-45 185.7 153 65.4
MCO04G167 Micromonas commoda HOM05D003431 ORTHO05D005152 1.8e-41 173.3 214 42.5
MELO3C023261.2 Cucumis melo HOM05D003431 ORTHO05D005152 5.1e-36 155.2 97 73.2
Dinv19350 Davidia involucrata HOM05D003431 ORTHO05D005152 1.1e-35 154.1 114 71.1
COL.COLO4_17896 Corchorus olitorius HOM05D003431 ORTHO05D005152 3.7e-34 149.1 81 82.7
Cre06.g261700 Chlamydomonas reinhardtii HOM05D003431 ORTHO05D005152 1.8e-33 146.7 217 40.1
SEGI_37042 Sequoiadendron giganteum HOM05D003431 ORTHO05D005152 5.3e-33 145.2 95 66.3
PRCOL_00006634 Prasinoderma coloniale HOM05D003431 ORTHO05D005152 2.2e-31 139.8 226 34.5
Dinv19351 Davidia involucrata HOM05D003431 ORTHO05D005152 5.0e-31 138.7 84 81.0
BolC5t29949H Brassica oleracea HOM05D003431 ORTHO05D005152 8.2e-26 121.3 139 52.5
HanXRQChr10g0305141 Helianthus annuus HOM05D003431 ORTHO05D005152 1.1e-25 120.9 135 48.1
Cfa023894 Carpinus fangiana HOM05D003431 ORTHO05D005152 2.9e-23 112.8 228 31.1
C05p02190 Brassica napus HOM05D003431 ORTHO05D014368 1.8e-20 103.6 114 53.5
Zm00001eb078820 Zea mays HOM05D003431 ORTHO05D005152 1.8e-20 103.6 97 53.6
BcaC06g34618 Brassica carinata HOM05D003431 ORTHO05D027670 1.7e-18 97.1 114 50.0
A02p15310 Brassica napus HOM05D003431 ORTHO05D027670 6.3e-18 95.1 97 52.6
A04p21520 Brassica napus HOM05D003431 ORTHO05D027670 6.3e-18 95.1 97 52.6
C07p26410 Brassica napus HOM05D003431 ORTHO05D027670 1.8e-17 93.6 97 52.6
Hma1.2p1_1038F.1_g250760 Hydrangea macrophylla HOM05D003431 ORTHO05D005152 2.6e-16 89.7 56 80.4
BolC5t28997H Brassica oleracea HOM05D003431 ORTHO05D014368 1.3e-15 87.4 103 51.5
Zm00001eb026620 Zea mays HOM05D003431 ORTHO05D005152 1.5e-14 84.0 82 52.4
SEGI_34754 Sequoiadendron giganteum HOM05D003431 ORTHO05D005152 2.5e-14 83.2 55 72.7
BcaC05g24499 Brassica carinata HOM05D003431 ORTHO05D014368 1.6e-13 80.5 111 47.7
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 2.1e-13 80.1 75 54.7
Hma1.2p1_1425F.1_g282850 Hydrangea macrophylla HOM05D003263 ORTHO05D004801 3.6e-13 79.3 42 85.7
MELO3C034572.2 Cucumis melo HOM05D003431 ORTHO05D005152 3.0e-12 76.3 55 67.3
EL10Ac8g19160 Beta vulgaris HOM05D003431 ORTHO05D005152 1.1e-11 74.3 42 73.8
SEGI_29948 Sequoiadendron giganteum HOM05D003431 ORTHO05D005152 2.2e-10 70.1 58 51.7
HanXRQChr07g0193031 Helianthus annuus HOM05D003431 ORTHO05D004801 1.4e-09 67.4 42 71.4
ATR0085G001 Amborella trichopoda HOM05D003431 ORTHO05D014368 1.8e-09 67.0 49 55.1
TAR636G2181 Trochodendron aralioides HOM05D003431 ORTHO05D005152 1.6e-08 63.9 32 90.6
Lalb_Chr15g0090611 Lupinus albus HOM05D003431 ORTHO05D005152 7.7e-08 61.6 39 69.2
A05p19340 Brassica napus HOM05D003431 ORTHO05D014368 1.0e-07 61.2 57 61.4
PSO173G0151 Papaver somniferum HOM05D003431 ORTHO05D304616 2.2e-07 60.1 207 28.0
BcaC07g37686 Brassica carinata HOM05D003431 ORTHO05D032197 2.9e-07 59.7 106 36.8
BcaC08g45659 Brassica carinata HOM05D003431 ORTHO05D014368 5.0e-07 58.9 81 42.0
BolC6t38529H Brassica oleracea HOM05D003431 ORTHO05D014368 1.1e-06 57.8 87 40.2
Actinidia00219 Actinidia chinensis HOM05D003431 ORTHO05D056071 3.2e-06 56.2 82 47.6


User provided reference genes

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