Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 2.8e-277 958.0 481 100.0
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.0e-207 726.9 444 85.1
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 4.0e-167 592.0 459 70.4
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 8.9e-167 590.9 457 70.5
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 1.2e-166 590.5 457 70.5
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 1.2e-150 537.3 443 66.8
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 2.0e-142 510.0 413 68.5
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 2.6e-134 483.0 468 58.8
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 4.9e-133 478.8 456 59.0
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 4.2e-132 475.7 458 56.6
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 7.1e-132 474.9 459 59.0
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 7.6e-126 454.9 475 55.6
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.0e-125 454.5 458 55.9
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 1.3e-125 454.1 440 59.1
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.4e-124 450.7 458 55.9
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 1.4e-124 450.7 458 56.1
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 1.4e-124 450.7 471 54.8
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 6.1e-123 445.3 463 55.3
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 1.0e-122 444.5 465 54.6
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.8e-122 443.7 453 55.0
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 2.5e-121 439.9 460 54.8
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.1e-119 434.5 447 54.6
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 1.4e-119 434.1 464 54.1
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 3.1e-119 433.0 468 54.7
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 4.1e-119 432.6 458 53.9
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 5.3e-119 432.2 465 55.3
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 9.0e-119 431.4 444 54.1
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 1.5e-118 430.6 466 53.6
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 2.6e-118 429.9 466 53.4
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 7.7e-118 428.3 443 54.2
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 1.7e-117 427.2 449 54.6
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 5.0e-117 425.6 468 53.8
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 4.2e-116 422.5 457 52.7
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 7.2e-116 421.8 457 53.6
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 7.2e-116 421.8 442 54.8
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 1.6e-115 420.6 461 53.4
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 2.7e-115 419.9 468 52.8
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 3.6e-115 419.5 462 54.5
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 6.1e-115 418.7 445 54.8
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 1.0e-114 417.9 454 53.5
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.4e-114 417.5 450 52.9
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 5.1e-114 415.6 455 52.3
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 5.1e-114 415.6 445 52.8
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 6.7e-114 415.2 455 51.4
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 6.7e-114 415.2 460 52.0
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.5e-113 414.1 468 52.4
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 2.0e-113 413.7 457 52.7
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 1.3e-112 411.0 460 51.5
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.2e-112 410.2 460 51.5
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.8e-112 409.8 460 51.5
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 4.1e-111 406.0 460 52.4
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 6.9e-111 405.2 446 51.8
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 9.1e-111 404.8 465 51.6
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 9.1e-111 404.8 448 52.0
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 1.5e-110 404.1 461 51.4
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 4.5e-110 402.5 440 53.0
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 4.5e-110 402.5 459 51.6
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 2.2e-109 400.2 427 52.0
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 3.8e-109 399.4 440 53.9
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 5.0e-109 399.1 465 51.4
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-107 394.4 387 57.6
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 7.9e-107 391.7 472 48.7
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 2.3e-106 390.2 438 53.2
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 5.1e-106 389.0 439 53.1
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 5.7e-105 385.6 447 50.1
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 9.7e-105 384.8 464 49.6
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 1.3e-104 384.4 458 50.2
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 8.2e-104 381.7 460 49.8
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 1.8e-103 380.6 458 49.1
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 1.8e-103 380.6 452 50.4
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 9.1e-103 378.3 458 50.0
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 4.5e-102 375.9 464 49.8
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 1.0e-101 374.8 443 49.0
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 1.3e-101 374.4 464 49.4
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 3.8e-101 372.9 457 48.1
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 4.2e-100 369.4 463 48.2
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 8.0e-99 365.2 361 56.5
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 1.8e-98 364.0 405 54.8
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 5.7e-97 359.0 410 52.0
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 7.4e-97 358.6 466 48.3
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 7.4e-97 358.6 468 48.1
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 2.8e-96 356.7 479 47.2
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.2e-94 351.3 443 45.8
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 4.5e-94 349.4 438 47.9
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.5e-92 344.4 440 45.9
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 2.5e-92 343.6 454 47.8
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 7.2e-92 342.0 473 44.0
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.4e-89 332.8 380 51.8
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 2.2e-88 330.5 412 50.2
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.4e-87 325.9 387 50.4
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.1e-87 325.1 389 50.1
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 7.7e-86 322.0 402 45.8
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-81 307.0 341 52.2
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.9e-80 302.8 341 51.6
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.9e-80 302.8 341 51.6
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.9e-80 302.8 341 51.6
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 1.2e-78 298.1 408 44.4
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 3.8e-77 293.1 514 37.4
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 4.7e-75 286.2 373 44.5
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 1.8e-71 274.2 459 37.5
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 2.5e-68 263.8 478 35.8
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 6.8e-66 255.8 334 46.4
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 1.9e-60 237.7 336 45.5
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 3.3e-60 236.9 183 66.7
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.3e-56 224.9 324 44.1
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 4.4e-49 199.9 280 45.4
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 1.1e-47 195.3 240 47.5
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 9.0e-34 149.1 410 30.2
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.3e-32 145.2 176 47.2
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 4.8e-27 126.7 79 77.2
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 7.6e-25 119.4 205 36.1
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.8e-19 100.1 132 42.4
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.7e-11 73.9 75 58.7
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.7e-11 73.9 75 58.7
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.7e-11 73.9 75 58.7
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.4e-10 72.0 59 55.9
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 6.5e-08 63.2 94 41.5


User provided reference genes

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