Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.4e-162 576.2 294 100.0
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.7e-160 569.3 294 98.3
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 1.9e-151 539.3 296 92.2
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 2.7e-150 535.4 296 91.6
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 2.3e-149 532.3 292 91.4
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 2.3e-149 532.3 296 91.2
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 1.5e-148 529.6 294 90.1
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 2.0e-137 492.7 294 82.7
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 2.1e-134 482.6 294 80.6
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 3.3e-132 475.3 292 80.5
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 2.8e-131 472.2 293 78.8
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 2.8e-131 472.2 294 79.9
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 1.1e-130 470.3 293 78.5
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 1.8e-130 469.5 294 78.2
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 3.1e-130 468.8 290 79.7
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 7.0e-130 467.6 294 77.6
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 5.9e-129 464.5 291 77.7
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 1.7e-128 463.0 292 77.7
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 1.7e-128 463.0 294 77.2
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 6.5e-128 461.1 294 76.9
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 6.5e-128 461.1 291 77.3
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 8.5e-128 460.7 294 76.5
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 1.9e-127 459.5 277 80.1
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 2.5e-127 459.1 294 77.6
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 3.2e-127 458.8 289 76.8
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 3.2e-127 458.8 292 77.4
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 3.2e-127 458.8 294 77.2
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 1.2e-126 456.8 292 77.1
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 1.6e-126 456.4 291 76.6
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 2.1e-126 456.1 289 76.1
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 6.1e-126 454.5 292 74.7
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 8.0e-126 454.1 292 78.4
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 1.0e-125 453.8 294 77.2
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 1.4e-125 453.4 294 75.2
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 6.7e-125 451.1 294 76.5
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 8.8e-125 450.7 294 76.5
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 1.1e-124 450.3 292 75.3
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 2.0e-124 449.5 292 76.0
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 2.6e-124 449.1 295 75.9
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 3.3e-124 448.7 289 78.2
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 3.3e-124 448.7 293 77.1
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 3.3e-124 448.7 289 74.7
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 5.7e-124 448.0 292 75.0
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 5.7e-124 448.0 292 75.7
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 5.7e-124 448.0 294 76.2
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 7.5e-124 447.6 294 76.5
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 7.5e-124 447.6 292 75.7
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 1.3e-123 446.8 289 76.1
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 6.3e-123 444.5 293 75.4
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 8.2e-123 444.1 292 74.0
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 1.1e-122 443.7 289 74.0
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 1.1e-122 443.7 292 75.7
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 1.4e-122 443.4 271 79.3
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 1.4e-122 443.4 293 75.1
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 4.1e-122 441.8 288 76.4
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 4.1e-122 441.8 289 74.7
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 4.1e-122 441.8 295 73.6
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 7.0e-122 441.0 294 73.5
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 1.2e-121 440.3 294 74.1
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 1.6e-121 439.9 289 75.4
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 1.6e-121 439.9 294 74.5
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 7.7e-121 437.6 288 73.6
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 2.2e-120 436.0 319 70.2
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 6.5e-120 434.5 289 73.0
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 8.5e-120 434.1 291 73.2
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 3.2e-119 432.2 274 77.0
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 4.2e-119 431.8 294 73.8
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 7.2e-119 431.0 296 72.6
Nitab4.5_0000132g0170 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.2e-118 430.3 225 96.4
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 1.6e-118 429.9 294 73.5
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 2.1e-118 429.5 276 76.1
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 2.7e-118 429.1 292 73.3
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 2.7e-118 429.1 294 73.1
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 2.7e-118 429.1 294 73.5
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 3.6e-118 428.7 293 72.7
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 4.7e-118 428.3 289 73.7
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 1.4e-117 426.8 289 74.4
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 1.8e-117 426.4 290 72.1
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 2.3e-117 426.0 290 71.7
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 3.0e-117 425.6 292 71.6
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 6.8e-117 424.5 319 67.7
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 1.2e-116 423.7 294 72.4
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 1.3e-115 420.2 289 71.6
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 3.7e-115 418.7 294 70.4
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 8.3e-115 417.5 294 68.7
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 8.3e-115 417.5 294 68.7
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 1.1e-114 417.2 277 71.8
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 1.4e-114 416.8 294 68.4
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 1.8e-114 416.4 294 68.4
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 2.4e-114 416.0 294 68.4
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 3.1e-114 415.6 296 69.6
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 5.4e-114 414.8 294 68.0
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 1.6e-113 413.3 307 68.4
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.6e-113 413.3 307 68.4
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.6e-113 413.3 307 68.4
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 2.0e-113 412.9 294 68.4
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 3.5e-113 412.1 289 68.5
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 4.5e-113 411.8 294 69.4
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.3e-112 410.2 306 68.0
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 1.7e-112 409.8 294 66.7
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 1.7e-112 409.8 292 71.9
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 2.2e-112 409.5 306 68.3
Atru.chr8.1634 Acer truncatum HOM05D005183 ORTHO05D006684 2.9e-112 409.1 269 72.5
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 2.9e-112 409.1 277 70.8
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 6.5e-112 407.9 277 70.4
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 8.5e-112 407.5 277 70.0
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 8.5e-112 407.5 277 70.0
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 2.5e-111 406.0 288 69.1
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 9.4e-111 404.1 307 67.4
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 1.2e-110 403.7 291 70.1
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 3.6e-110 402.1 298 67.4
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 3.6e-110 402.1 300 67.0
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 6.3e-107 391.3 288 67.7
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 3.8e-104 382.1 293 65.9
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 3.8e-104 382.1 293 66.2
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 6.6e-104 381.3 235 77.0
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 6.6e-104 381.3 267 69.7
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 1.7e-99 366.7 308 63.6
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 1.8e-98 363.2 231 74.9
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 1.7e-91 340.1 292 62.3
Lalb_Chr02g0155161 Lupinus albus HOM05D005183 ORTHO05D006684 1.7e-91 340.1 231 71.4
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 3.7e-91 339.0 292 62.0
Ca_28565_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 2.4e-90 336.3 223 76.2
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 8.9e-85 317.8 272 56.2
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 2.2e-83 313.2 274 57.7
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 1.0e-80 304.3 275 56.0
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 2.2e-75 286.6 294 53.1
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 6.6e-72 275.0 283 50.5
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 6.6e-72 275.0 254 57.9
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 6.6e-72 275.0 290 49.7
Oeu037537.3 Olea europaea HOM05D005183 ORTHO05D006684 3.3e-71 272.7 232 64.2
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 2.4e-69 266.5 273 50.2
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 9.0e-61 238.0 275 47.3
PRCOL_00004600 Prasinoderma coloniale HOM05D005183 ORTHO05D006684 1.3e-48 197.6 278 41.7
HanXRQChr08g0223931 Helianthus annuus HOM05D005183 ORTHO05D006684 1.8e-48 197.2 173 64.2
Ca_11626_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 3.3e-39 166.4 104 79.8
Os05g0506900 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 1.0e-24 118.2 72 73.6
Lalb_Chr02g0155171 Lupinus albus HOM05D005183 ORTHO05D006684 5.7e-23 112.5 71 70.4
MSTRG.19230 Avicennia marina HOM05D005183 ORTHO05D026969 9.7e-23 111.7 69 76.8
TAR371G0095 Trochodendron aralioides HOM05D005183 ORTHO05D045124 4.1e-21 106.3 116 53.4
MELO3C028534.2 Cucumis melo HOM05D005183 ORTHO05D006684 3.6e-17 93.2 57 73.7
Dinv21257 Davidia involucrata HOM05D005183 ORTHO05D045124 3.1e-13 80.1 99 50.5
C04p39730 Brassica napus HOM05D005183 ORTHO05D026969 1.7e-11 74.3 68 57.4
BolC4t25545H Brassica oleracea HOM05D005183 ORTHO05D026969 1.7e-11 74.3 68 57.4
BolC6t35803H Brassica oleracea HOM05D005183 ORTHO05D026969 3.3e-07 60.1 68 50.0


User provided reference genes

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