Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005261g0010 Nicotiana tabacum HOM05D004012 ORTHO05D004752 3.8e-148 528.1 259 100.0
Nitab4.5_0000064g0090 Nicotiana tabacum HOM05D004012 ORTHO05D004752 1.3e-140 503.1 278 91.7
PGSC0003DMG401004242 Solanum tuberosum HOM05D004012 ORTHO05D004752 2.6e-128 462.2 278 85.6
Solyc04g024500.3 Solanum lycopersicum HOM05D004012 ORTHO05D004752 2.2e-127 459.1 278 84.5
Sopen04g017040 Solanum pennellii HOM05D004012 ORTHO05D004752 2.2e-127 459.1 278 84.5
CAN.G10.8 Capsicum annuum HOM05D004012 ORTHO05D004752 7.0e-126 454.1 278 84.9
Peaxi162Scf00621g00412 Petunia axillaris HOM05D004012 ORTHO05D004752 5.9e-125 451.1 278 81.7
Hma1.2p1_3052F.1_g332140 Hydrangea macrophylla HOM05D004012 ORTHO05D004752 2.0e-104 382.9 279 69.2
Hma1.2p1_0513F.1_g169610 Hydrangea macrophylla HOM05D004012 ORTHO05D004752 4.9e-103 378.3 279 68.5
Dinv19127 Davidia involucrata HOM05D004012 ORTHO05D004752 6.6e-100 367.9 281 67.6
Dinv26833 Davidia involucrata HOM05D004012 ORTHO05D004752 6.2e-98 361.3 285 64.2
CSS0025733 Camellia sinensis var. sinensis HOM05D004012 ORTHO05D004752 6.4e-95 351.3 279 62.7
SalBow1G0131 Salvia bowleyana HOM05D004012 ORTHO05D004752 2.7e-93 345.9 281 63.7
MSTRG.9397 Avicennia marina HOM05D004012 ORTHO05D004752 6.0e-93 344.7 281 61.9
SGA_v2.0_scaffold14G07064 Striga asiatica HOM05D004012 ORTHO05D004752 6.6e-92 341.3 281 61.9
Oeu034405.1 Olea europaea HOM05D004012 ORTHO05D004752 1.1e-91 340.5 289 63.3
Nn5g27391 Nelumbo nucifera HOM05D004012 ORTHO05D004752 1.5e-91 340.1 280 61.8
Migut.D01135 Erythranthe guttata HOM05D004012 ORTHO05D004752 9.6e-91 337.4 281 60.5
Manes.13G154600 Manihot esculenta HOM05D004012 ORTHO05D004752 9.6e-91 337.4 278 62.2
TAR628G1247 Trochodendron aralioides HOM05D004012 ORTHO05D004752 9.6e-91 337.4 280 60.7
AUR62000581 Chenopodium quinoa HOM05D004012 ORTHO05D004752 3.1e-89 332.4 279 62.0
Hund07194 Selenicereus undatus HOM05D004012 ORTHO05D004752 5.3e-89 331.6 279 62.4
Rhsim01G0147700 Rhododendron simsii HOM05D004012 ORTHO05D004752 9.0e-89 330.9 307 58.0
Atru.chr3.1437 Acer truncatum HOM05D004012 ORTHO05D004752 1.5e-88 330.1 279 61.3
FvH4_5g20280 Fragaria vesca HOM05D004012 ORTHO05D004752 2.2e-87 326.2 281 60.9
AUR62006937 Chenopodium quinoa HOM05D004012 ORTHO05D004752 2.9e-87 325.9 279 60.6
FAN08G1522 Fragaria x ananassa HOM05D004012 ORTHO05D004752 2.9e-87 325.9 281 60.5
RcHm_v2.0_Chr7g0205341 Rosa chinensis HOM05D004012 ORTHO05D004752 2.9e-87 325.9 281 60.5
Oeu036288.1 Olea europaea HOM05D004012 ORTHO05D004752 3.8e-87 325.5 292 59.6
Lj6g0017875 Lotus japonicus HOM05D004012 ORTHO05D004752 4.9e-87 325.1 278 59.0
Ciclev10005092m.g Citrus clementina HOM05D004012 ORTHO05D004752 1.1e-86 323.9 279 59.1
Prupe.5G058000 Prunus persica HOM05D004012 ORTHO05D004752 1.1e-86 323.9 281 61.9
FAN18G2241 Fragaria x ananassa HOM05D004012 ORTHO05D004752 1.9e-86 323.2 281 60.1
Potri.017G122600 Populus trichocarpa HOM05D004012 ORTHO05D004752 2.4e-86 322.8 278 58.6
Sc16g0009950 Simmondsia chinensis HOM05D004012 ORTHO05D004752 7.1e-86 321.2 279 58.8
MSTRG.4671 Avicennia marina HOM05D004012 ORTHO05D004752 9.3e-86 320.9 279 59.9
CiPaw.15G186100 Carya illinoinensis HOM05D004012 ORTHO05D004752 9.3e-86 320.9 278 59.0
FAN13G1241 Fragaria x ananassa HOM05D004012 ORTHO05D004752 1.2e-85 320.5 283 60.1
Glyma.02G005000 Glycine max HOM05D004012 ORTHO05D004752 1.2e-85 320.5 278 59.0
MD04G1052500 Malus domestica HOM05D004012 ORTHO05D004752 1.6e-85 320.1 281 60.5
MELO3C023211.2 Cucumis melo HOM05D004012 ORTHO05D004752 2.7e-85 319.3 278 58.3
CsaV3_2G019600 Cucumis sativus L. HOM05D004012 ORTHO05D004752 2.7e-85 319.3 278 58.6
MD06G1047700 Malus domestica HOM05D004012 ORTHO05D004752 6.0e-85 318.2 281 60.5
GSVIVG01000257001 Vitis vinifera HOM05D004012 ORTHO05D004752 6.0e-85 318.2 254 64.6
Potri.004G092400 Populus trichocarpa HOM05D004012 ORTHO05D004752 1.3e-84 317.0 279 58.4
VMungo0720G3057 Vigna mungo HOM05D004012 ORTHO05D004752 1.7e-84 316.6 278 58.3
Phvul.007G277800 Phaseolus vulgaris HOM05D004012 ORTHO05D004752 3.0e-84 315.8 278 58.3
Aqoxy5G01862 Aquilegia oxysepala HOM05D004012 ORTHO05D004752 3.9e-84 315.5 280 57.5
FAN04G0350 Fragaria x ananassa HOM05D004012 ORTHO05D004752 3.9e-84 315.5 281 59.4
Glyma.10G003500 Glycine max HOM05D004012 ORTHO05D004752 3.9e-84 315.5 278 58.6
Lalb_Chr01g0020921 Lupinus albus HOM05D004012 ORTHO05D004752 5.1e-84 315.1 278 59.0
Eucgr.I00032 Eucalyptus grandis HOM05D004012 ORTHO05D004752 1.9e-83 313.2 275 60.7
Eucgr.I00085 Eucalyptus grandis HOM05D004012 ORTHO05D004752 1.9e-83 313.2 275 60.7
ECA238G2948 Erigeron canadensis HOM05D004012 ORTHO05D004752 4.3e-83 312.0 281 55.9
MBI06_g32154_MAGBIO Magnolia biondii HOM05D004012 ORTHO05D004752 4.3e-83 312.0 306 53.6
Sed0016932 Sechium edule HOM05D004012 ORTHO05D004752 5.6e-83 311.6 277 58.1
PSO210G3799 Papaver somniferum HOM05D004012 ORTHO05D004752 7.3e-83 311.2 279 58.8
unitig_0.g354 Utricularia gibba HOM05D004012 ORTHO05D004752 7.3e-83 311.2 280 58.9
ClCG02G000230 Citrullus lanatus HOM05D004012 ORTHO05D004752 9.6e-83 310.8 290 54.8
Sabra17G0101400 Salix brachista HOM05D004012 ORTHO05D004752 1.3e-82 310.5 218 67.9
PGR119G2008 Punica granatum HOM05D004012 ORTHO05D004752 2.1e-82 309.7 275 59.6
Lalb_Chr19g0127941 Lupinus albus HOM05D004012 ORTHO05D004752 2.8e-82 309.3 278 58.6
Cc07_g20580 Coffea canephora HOM05D004012 ORTHO05D004752 3.6e-82 308.9 218 71.6
Sabra17G0104000 Salix brachista HOM05D004012 ORTHO05D004752 4.8e-82 308.5 218 67.4
CANSAT54G0087 Cannabis sativa HOM05D004012 ORTHO05D004752 1.1e-81 307.4 282 57.8
PSO761G0211 Papaver somniferum HOM05D004012 ORTHO05D004752 4.0e-81 305.4 279 57.7
Gohir.D10G106700 Gossypium hirsutum HOM05D004012 ORTHO05D004752 5.3e-81 305.1 280 58.2
Gorai.011G116800 Gossypium raimondii HOM05D004012 ORTHO05D004752 5.3e-81 305.1 280 58.2
TWI31G0701 Tripterygium wilfordii HOM05D004012 ORTHO05D004752 5.3e-81 305.1 278 58.3
Lalb_Chr03g0037441 Lupinus albus HOM05D004012 ORTHO05D004752 1.5e-80 303.5 278 57.6
Gohir.A10G084900 Gossypium hirsutum HOM05D004012 ORTHO05D004752 2.0e-80 303.1 280 57.9
Cpa.g.sc138.55 Carica papaya HOM05D004012 ORTHO05D004752 3.4e-80 302.4 218 68.8
TAR376G0099 Trochodendron aralioides HOM05D004012 ORTHO05D004752 4.5e-80 302.0 219 67.6
Ca_12160_v3 Cicer arietinum L. HOM05D004012 ORTHO05D004752 7.6e-80 301.2 278 54.7
Sabra04G0062100 Salix brachista HOM05D004012 ORTHO05D004752 7.6e-80 301.2 307 53.4
arahy.Tifrunner.gnm1.ann1.5Q2P9B Arachis hypogaea HOM05D004012 ORTHO05D004752 9.9e-80 300.8 259 59.1
arahy.Tifrunner.gnm1.ann1.EZQ64B Arachis hypogaea HOM05D004012 ORTHO05D004752 9.9e-80 300.8 259 59.1
Cc07_g20480 Coffea canephora HOM05D004012 ORTHO05D004752 3.8e-79 298.9 218 70.2
Actinidia14359 Actinidia chinensis HOM05D004012 ORTHO05D004752 4.9e-79 298.5 280 58.6
MBI10_g20270_MAGBIO Magnolia biondii HOM05D004012 ORTHO05D004752 6.4e-79 298.1 280 55.7
Thecc.01G145600 Theobroma cacao HOM05D004012 ORTHO05D004752 4.2e-78 295.4 281 55.9
HanXRQChr13g0402671 Helianthus annuus HOM05D004012 ORTHO05D004752 1.2e-77 293.9 280 53.6
DCAR_009624 Daucus carota HOM05D004012 ORTHO05D004752 2.1e-77 293.1 261 60.2
CDE05G2224 Ceratophyllum demersum HOM05D004012 ORTHO05D004752 1.8e-76 290.0 280 56.4
EL10Ac4g09708 Beta vulgaris HOM05D004012 ORTHO05D004752 8.7e-76 287.7 262 58.8
Medtr1g041405 Medicago truncatula HOM05D004012 ORTHO05D004752 1.9e-75 286.6 298 50.7
Psat6g104000 Pisum sativum HOM05D004012 ORTHO05D004752 1.3e-74 283.9 297 49.5
TPR.G25177 Trifolium pratense HOM05D004012 ORTHO05D004752 1.3e-74 283.9 291 50.9
TWI79G0644 Tripterygium wilfordii HOM05D004012 ORTHO05D004752 1.8e-73 280.0 259 58.3
Thhalv10013606m.g Eutrema salsugineum HOM05D004012 ORTHO05D004752 4.9e-71 271.9 275 50.9
Duzib147G1077 Durio zibethinus HOM05D004012 ORTHO05D004752 3.2e-70 269.2 265 57.0
Cc07_g20540 Coffea canephora HOM05D004012 ORTHO05D004752 5.5e-70 268.5 221 62.9
Ah.02g118090 Amaranthus hybridus HOM05D004012 ORTHO05D004752 1.6e-69 266.9 260 55.0
Ah.06g188310 Amaranthus hybridus HOM05D004012 ORTHO05D004752 2.1e-69 266.5 214 63.1
BcaB08g36680 Brassica carinata HOM05D004012 ORTHO05D004752 2.7e-69 266.2 278 50.4
Sp6g25900 Schrenkiella parvula HOM05D004012 ORTHO05D004752 4.6e-69 265.4 279 48.0
vmacro21003 Vaccinium macrocarpon HOM05D004012 ORTHO05D004752 3.0e-68 262.7 234 58.5
A10p21150 Brassica napus HOM05D004012 ORTHO05D004752 1.5e-67 260.4 298 47.3
C09p58260 Brassica napus HOM05D004012 ORTHO05D004752 1.5e-67 260.4 292 47.6
BraA10t44178Z Brassica rapa HOM05D004012 ORTHO05D004752 1.5e-67 260.4 298 47.3
Actinidia12239 Actinidia chinensis HOM05D004012 ORTHO05D004752 3.3e-67 259.2 164 77.4
AT5G18420 Arabidopsis thaliana HOM05D004012 ORTHO05D004752 9.6e-67 257.7 275 48.7
BolC9t58691H Brassica oleracea HOM05D004012 ORTHO05D004752 9.6e-67 257.7 293 47.1
Lsat_1_v5_gn_0_9061 Lactuca sativa HOM05D004012 ORTHO05D004752 9.6e-67 257.7 279 50.9
Aa31LG11G11210 Aethionema arabicum HOM05D004012 ORTHO05D004752 1.1e-65 254.2 300 44.0
QL10p034897 Quercus lobata HOM05D004012 ORTHO05D004752 1.2e-64 250.8 162 72.8
Carub.0006s1668 Capsella rubella HOM05D004012 ORTHO05D004752 2.0e-64 250.0 275 46.9
CDE05G3168 Ceratophyllum demersum HOM05D004012 ORTHO05D004752 2.0e-64 250.0 280 51.4
HPP92_005635 Vanilla planifolia HOM05D004012 ORTHO05D004752 4.5e-64 248.8 195 64.1
Lju41A56G29 Lonicera japonica HOM05D004012 ORTHO05D004752 1.3e-63 247.3 343 44.3
ATR1089G159 Amborella trichopoda HOM05D004012 ORTHO05D004752 6.5e-63 245.0 281 46.3
AL6G29670 Arabidopsis lyrata HOM05D004012 ORTHO05D004752 1.9e-62 243.4 218 54.1
BolC3t13514H Brassica oleracea HOM05D004012 ORTHO05D004752 1.9e-62 243.4 295 45.1
C03p10330 Brassica napus HOM05D004012 ORTHO05D004752 2.5e-62 243.0 295 44.7
BraA03t10211Z Brassica rapa HOM05D004012 ORTHO05D004752 2.5e-62 243.0 295 44.7
CARHR194600 Cardamine hirsuta HOM05D004012 ORTHO05D004752 3.2e-62 242.7 278 46.8
THA.LOC104806688 Tarenaya hassleriana HOM05D004012 ORTHO05D004752 2.7e-61 239.6 277 48.0
Lj4A823T24 Lonicera japonica HOM05D004012 ORTHO05D004752 1.3e-58 230.7 145 77.2
Duzib264G1318 Durio zibethinus HOM05D004012 ORTHO05D004752 1.8e-57 226.9 164 68.9
Duzib187G0370 Durio zibethinus HOM05D004012 ORTHO05D004752 2.0e-56 223.4 164 67.1
Mapoly0005s0018 Marchantia polymorpha HOM05D004012 ORTHO05D004752 1.7e-55 220.3 278 41.7
Zm00001eb138450 Zea mays HOM05D004012 ORTHO05D004752 1.7e-55 220.3 273 47.3
DCAR_019944 Daucus carota HOM05D004012 ORTHO05D004752 5.5e-54 215.3 223 52.5
Pp3c20_12330 Physcomitrium patens HOM05D004012 ORTHO05D004752 5.5e-54 215.3 276 41.7
AagrBONN_evm.TU.Sc2ySwM_228.2915 Anthoceros agrestis HOM05D004012 ORTHO05D004752 1.4e-52 210.7 255 43.1
Lsat_1_v5_gn_5_118080 Lactuca sativa HOM05D004012 ORTHO05D004752 6.7e-52 208.4 282 43.3
Actinidia30855 Actinidia chinensis HOM05D004012 ORTHO05D004752 1.7e-50 203.8 279 44.4
HPP92_005646 Vanilla planifolia HOM05D004012 ORTHO05D004752 2.2e-50 203.4 232 49.6
Os11g0240900 Oryza sativa ssp. japonica HOM05D004012 ORTHO05D004752 2.8e-50 203.0 266 44.4
Pp3c24_6950 Physcomitrium patens HOM05D004012 ORTHO05D004752 1.0e-47 194.5 278 38.8
SHI03102 Sapria himalayana HOM05D004012 ORTHO05D004752 2.9e-47 193.0 144 64.6
CBR_g22449 Chara braunii HOM05D004012 ORTHO05D004752 9.4e-46 188.0 277 41.5
Zm00001eb112220 Zea mays HOM05D004012 ORTHO05D004752 3.6e-45 186.0 276 41.7
Pp3c23_1780 Physcomitrium patens HOM05D004012 ORTHO05D004752 1.0e-44 184.5 197 46.2
Zm00001eb167940 Zea mays HOM05D004012 ORTHO05D004752 9.1e-41 171.4 275 41.5
HPP92_005679 Vanilla planifolia HOM05D004012 ORTHO05D004752 4.4e-35 152.5 261 39.1
SMO196G0070 Selaginella moellendorffii HOM05D004012 ORTHO05D004752 7.7e-24 115.2 120 48.3
BcaC04g18693 Brassica carinata HOM05D004012 ORTHO05D004752 1.3e-23 114.4 220 39.5
QL10p034900 Quercus lobata HOM05D004012 ORTHO05D004752 2.0e-16 90.5 117 45.3
Actinidia12240 Actinidia chinensis HOM05D004012 ORTHO05D004752 3.4e-11 73.2 99 40.4
Cre17.g726800 Chlamydomonas reinhardtii HOM05D004012 ORTHO05D004752 1.1e-06 58.2 287 26.5


User provided reference genes

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