Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005245g0010 Nicotiana tabacum HOM05D000161 ORTHO05D009031 0.0e+00 1745.7 860 100.0
Nitab4.5_0001102g0080 Nicotiana tabacum HOM05D000161 ORTHO05D009031 0.0e+00 1566.6 841 93.2
Solyc09g074660.3 Solanum lycopersicum HOM05D000161 ORTHO05D009031 0.0e+00 1409.8 841 84.4
CAN.G1777.2 Capsicum annuum HOM05D000161 ORTHO05D009031 0.0e+00 1399.8 798 86.8
PGSC0003DMG400011361 Solanum tuberosum HOM05D000161 ORTHO05D009031 0.0e+00 1396.7 758 89.8
Sopen09g029540 Solanum pennellii HOM05D000161 ORTHO05D009031 0.0e+00 1385.9 742 90.6
Dinv33015 Davidia involucrata HOM05D000161 ORTHO05D009031 0.0e+00 1286.2 811 78.8
Peaxi162Scf00067g01926 Petunia axillaris HOM05D000161 ORTHO05D009031 0.0e+00 1280.0 687 91.0
Prupe.8G255100 Prunus persica HOM05D000161 ORTHO05D009031 0.0e+00 1247.6 810 75.4
Cc01_g20450 Coffea canephora HOM05D000161 ORTHO05D009031 0.0e+00 1241.5 817 73.9
Cfa005996 Carpinus fangiana HOM05D000161 ORTHO05D009031 0.0e+00 1238.4 834 74.1
vmacro02493 Vaccinium macrocarpon HOM05D000161 ORTHO05D009031 0.0e+00 1232.2 826 73.4
Ciclev10018836m.g Citrus clementina HOM05D000161 ORTHO05D009031 0.0e+00 1231.1 833 73.9
Haze_04852 Corylus avellana HOM05D000161 ORTHO05D009031 0.0e+00 1231.1 841 73.2
MD03G1280600 Malus domestica HOM05D000161 ORTHO05D009031 0.0e+00 1230.3 765 77.1
TWI59G0096 Tripterygium wilfordii HOM05D000161 ORTHO05D009031 0.0e+00 1229.2 820 74.3
Actinidia00683 Actinidia chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1223.4 756 77.8
CANSAT25G3411 Cannabis sativa HOM05D000161 ORTHO05D009031 0.0e+00 1221.5 781 76.2
RcHm_v2.0_Chr6g0293001 Rosa chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1220.7 805 74.4
Lj2C1188T5 Lonicera japonica HOM05D000161 ORTHO05D009031 0.0e+00 1219.5 752 77.7
CiPaw.07G102700 Carya illinoinensis HOM05D000161 ORTHO05D009031 0.0e+00 1216.4 844 72.0
Gohir.A11G116600 Gossypium hirsutum HOM05D000161 ORTHO05D009031 0.0e+00 1214.9 807 74.0
Atru.chr5.1245 Acer truncatum HOM05D000161 ORTHO05D009031 0.0e+00 1214.5 833 73.7
Gohir.D11G121700 Gossypium hirsutum HOM05D000161 ORTHO05D009031 0.0e+00 1212.6 807 73.6
Potri.002G209900 Populus trichocarpa HOM05D000161 ORTHO05D009031 0.0e+00 1210.3 820 72.8
Oeu057577.1 Olea europaea HOM05D000161 ORTHO05D009031 0.0e+00 1209.5 756 77.6
Manes.05G066300 Manihot esculenta HOM05D000161 ORTHO05D009031 0.0e+00 1205.3 761 75.7
COL.COLO4_08004 Corchorus olitorius HOM05D000161 ORTHO05D009031 0.0e+00 1204.9 742 78.0
GSVIVG01010978001 Vitis vinifera HOM05D000161 ORTHO05D009031 0.0e+00 1204.5 740 77.7
Gorai.007G130400 Gossypium raimondii HOM05D000161 ORTHO05D009031 0.0e+00 1204.1 807 73.2
FvH4_2g25030 Fragaria vesca HOM05D000161 ORTHO05D009031 0.0e+00 1202.6 801 73.9
Duzib138G1706 Durio zibethinus HOM05D000161 ORTHO05D009031 0.0e+00 1201.8 822 72.6
SGA_v2.0_scaffold1G00398 Striga asiatica HOM05D000161 ORTHO05D009031 0.0e+00 1201.8 812 73.2
TAR362G0905 Trochodendron aralioides HOM05D000161 ORTHO05D009031 0.0e+00 1201.4 810 73.3
Migut.D00162 Erythranthe guttata HOM05D000161 ORTHO05D009031 0.0e+00 1200.3 811 74.4
Thecc.01G293400 Theobroma cacao HOM05D000161 ORTHO05D009031 0.0e+00 1194.1 814 73.3
Eucgr.K03449 Eucalyptus grandis HOM05D000161 ORTHO05D009031 0.0e+00 1192.9 767 73.8
Phvul.001G204000 Phaseolus vulgaris HOM05D000161 ORTHO05D009031 0.0e+00 1190.3 785 73.1
CsaV3_7G028900 Cucumis sativus L. HOM05D000161 ORTHO05D009031 0.0e+00 1189.1 752 74.5
Medtr7g108310 Medicago truncatula HOM05D000161 ORTHO05D009031 0.0e+00 1187.2 756 75.5
MSTRG.18182 Avicennia marina HOM05D000161 ORTHO05D009031 0.0e+00 1185.2 824 71.8
Glyma.03G210900 Glycine max HOM05D000161 ORTHO05D009031 0.0e+00 1184.5 795 72.8
Sabra02G0150400 Salix brachista HOM05D000161 ORTHO05D009031 0.0e+00 1183.3 818 72.4
FAN24G1124 Fragaria x ananassa HOM05D000161 ORTHO05D009031 0.0e+00 1182.2 831 71.5
Sed0007225 Sechium edule HOM05D000161 ORTHO05D009031 0.0e+00 1177.9 755 74.7
ClCG09G006240 Citrullus lanatus HOM05D000161 ORTHO05D009031 0.0e+00 1176.8 820 70.4
PSO170G2241 Papaver somniferum HOM05D000161 ORTHO05D009031 0.0e+00 1176.4 805 71.4
VMungo1383G3032 Vigna mungo HOM05D000161 ORTHO05D009031 0.0e+00 1176.0 793 72.3
PGR044G2096 Punica granatum HOM05D000161 ORTHO05D009031 0.0e+00 1173.3 809 70.6
Lalb_Chr18g0047291 Lupinus albus HOM05D000161 ORTHO05D009031 0.0e+00 1170.6 774 73.3
TPR.G9287 Trifolium pratense HOM05D000161 ORTHO05D009031 0.0e+00 1167.5 740 75.1
Ca_09126_v3 Cicer arietinum L. HOM05D000161 ORTHO05D009031 0.0e+00 1166.8 760 74.1
Psat3g023920 Pisum sativum HOM05D000161 ORTHO05D009031 0.0e+00 1165.6 767 73.3
Glyma.19G208100 Glycine max HOM05D000161 ORTHO05D009031 0.0e+00 1164.8 742 75.1
Nn3g21368 Nelumbo nucifera HOM05D000161 ORTHO05D009031 0.0e+00 1162.5 786 70.5
PSO210G6500 Papaver somniferum HOM05D000161 ORTHO05D009031 0.0e+00 1162.5 805 70.6
ECA236G0218 Erigeron canadensis HOM05D000161 ORTHO05D009031 0.0e+00 1161.4 741 74.1
Lj1g0007269 Lotus japonicus HOM05D000161 ORTHO05D009031 0.0e+00 1161.0 742 74.5
FAN27G3195 Fragaria x ananassa HOM05D000161 ORTHO05D009031 0.0e+00 1160.2 843 69.8
HanXRQChr11g0350111 Helianthus annuus HOM05D000161 ORTHO05D009031 0.0e+00 1160.2 811 70.2
EL10Ac7g17434 Beta vulgaris HOM05D000161 ORTHO05D009031 0.0e+00 1159.8 783 71.6
Oeu034814.1 Olea europaea HOM05D000161 ORTHO05D009031 0.0e+00 1156.7 768 75.4
Aqoxy2G03055 Aquilegia oxysepala HOM05D000161 ORTHO05D009031 0.0e+00 1154.4 817 69.0
Lsat_1_v5_gn_8_54360 Lactuca sativa HOM05D000161 ORTHO05D009031 0.0e+00 1152.9 751 73.4
Rhsim13G0015500 Rhododendron simsii HOM05D000161 ORTHO05D009031 0.0e+00 1152.9 847 68.7
SalBow3G3810 Salvia bowleyana HOM05D000161 ORTHO05D009031 0.0e+00 1151.3 809 71.1
Sc24g0003880 Simmondsia chinensis HOM05D000161 ORTHO05D009031 0.0e+00 1147.9 809 70.1
Carub.0006s3386 Capsella rubella HOM05D000161 ORTHO05D009031 0.0e+00 1141.3 770 71.4
BcaB01g01973 Brassica carinata HOM05D000161 ORTHO05D009031 0.0e+00 1140.9 795 69.8
C09p02590 Brassica napus HOM05D000161 ORTHO05D009031 0.0e+00 1139.8 798 69.8
BolC9t53189H Brassica oleracea HOM05D000161 ORTHO05D009031 0.0e+00 1139.4 798 69.5
BraA09t35896Z Brassica rapa HOM05D000161 ORTHO05D009031 0.0e+00 1138.6 800 69.6
BcaC04g23994 Brassica carinata HOM05D000161 ORTHO05D009031 0.0e+00 1137.5 799 69.8
A09p02490 Brassica napus HOM05D000161 ORTHO05D009031 0.0e+00 1134.0 801 69.7
AL6G49740 Arabidopsis lyrata HOM05D000161 ORTHO05D009031 0.0e+00 1132.5 770 70.8
CARHR251630 Cardamine hirsuta HOM05D000161 ORTHO05D009031 0.0e+00 1123.2 774 70.4
Thhalv10028434m.g Eutrema salsugineum HOM05D000161 ORTHO05D009031 0.0e+00 1122.1 774 70.0
Sp6g03230 Schrenkiella parvula HOM05D000161 ORTHO05D009031 0.0e+00 1120.5 816 66.7
QL12p024497 Quercus lobata HOM05D000161 ORTHO05D009031 0.0e+00 1114.0 687 78.2
ATR0706G016 Amborella trichopoda HOM05D000161 ORTHO05D009031 0.0e+00 1113.6 776 69.7
unitig_747.g21791 Utricularia gibba HOM05D000161 ORTHO05D009031 0.0e+00 1111.7 861 64.0
MBI19_g24003_MAGBIO Magnolia biondii HOM05D000161 ORTHO05D009031 0.0e+00 1107.8 808 69.2
MELO3C016048.2 Cucumis melo HOM05D000161 ORTHO05D009031 0.0e+00 1105.1 685 76.2
arahy.Tifrunner.gnm1.ann1.4BF7AZ Arachis hypogaea HOM05D000161 ORTHO05D009031 0.0e+00 1078.5 691 75.0
Aa31LG5G2700 Aethionema arabicum HOM05D000161 ORTHO05D009031 5.9e-312 1073.9 754 69.5
DCAR_018348 Daucus carota HOM05D000161 ORTHO05D009031 9.9e-310 1066.6 738 71.0
Cpa.g.sc441.2 Carica papaya HOM05D000161 ORTHO05D009031 1.8e-303 1045.8 664 75.8
Lj1A36T49 Lonicera japonica HOM05D000161 ORTHO05D009031 2.4e-303 1045.4 745 69.1
AT4G03200 Arabidopsis thaliana HOM05D000161 ORTHO05D009031 5.3e-303 1044.3 686 72.3
Ah.08g212400 Amaranthus hybridus HOM05D000161 ORTHO05D009031 9.9e-302 1040.0 860 62.0
AUR62034669 Chenopodium quinoa HOM05D000161 ORTHO05D009031 4.6e-299 1031.2 893 60.5
CSS0042056 Camellia sinensis var. sinensis HOM05D000161 ORTHO05D009031 4.5e-294 1014.6 625 78.2
Pp3c3_16890 Physcomitrium patens HOM05D000161 ORTHO05D009031 6.3e-272 941.0 744 60.2
Mapoly0086s0039 Marchantia polymorpha HOM05D000161 ORTHO05D009031 8.2e-272 940.6 741 60.3
AagrBONN_evm.TU.Sc2ySwM_362.238 Anthoceros agrestis HOM05D000161 ORTHO05D009031 4.8e-264 914.8 743 58.8
arahy.Tifrunner.gnm1.ann1.Z5FZN7 Arachis hypogaea HOM05D000161 ORTHO05D009031 1.4e-263 913.3 605 72.7
Zm00001eb141990 Zea mays HOM05D000161 ORTHO05D009031 5.5e-252 874.8 635 65.2
AUR62008570 Chenopodium quinoa HOM05D000161 ORTHO05D009031 2.7e-243 845.9 688 62.5
HPP92_011821 Vanilla planifolia HOM05D000161 ORTHO05D009031 1.7e-237 826.6 623 63.1
CBR_g39419 Chara braunii HOM05D000019 ORTHO05D000048 5.0e-221 771.9 679 54.5
CDE09G1084 Ceratophyllum demersum HOM05D000161 ORTHO05D009031 4.4e-209 732.3 523 67.3
Cre07.g331250 Chlamydomonas reinhardtii HOM05D000161 ORTHO05D009031 6.9e-154 548.9 784 41.1
Lj1A204T33 Lonicera japonica HOM05D000161 ORTHO05D009031 4.8e-147 526.2 596 49.5
SMO011G0044 Selaginella moellendorffii HOM05D000161 ORTHO05D009031 3.6e-142 510.0 354 67.5
SEGI_38220 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 3.3e-119 433.7 344 62.2
Os01g0935600 Oryza sativa ssp. japonica HOM05D000161 ORTHO05D009031 7.1e-90 336.3 263 62.0
arahy.Tifrunner.gnm1.ann1.S4ZP24 Arachis hypogaea HOM05D000161 ORTHO05D009031 2.1e-86 324.7 289 60.2
arahy.Tifrunner.gnm1.ann1.FVA5UA Arachis hypogaea HOM05D000161 ORTHO05D009031 8.4e-75 286.2 226 63.3
arahy.Tifrunner.gnm1.ann1.59Y12W Arachis hypogaea HOM05D000161 ORTHO05D007114 5.6e-71 273.5 254 57.5
EL10Ac6g14352 Beta vulgaris HOM05D000161 ORTHO05D009031 6.5e-59 233.4 145 74.5
EL10Ac7g17602 Beta vulgaris HOM05D000161 ORTHO05D039009 1.7e-46 192.2 122 73.0
arahy.Tifrunner.gnm1.ann1.NYYR6I Arachis hypogaea HOM05D000161 ORTHO05D038839 4.1e-45 187.6 138 63.0
SEGI_26615 Sequoiadendron giganteum HOM05D000161 ORTHO05D009031 1.3e-38 166.0 126 61.9
HPP92_011833 Vanilla planifolia HOM05D000161 ORTHO05D036718 1.7e-30 139.0 145 53.1
Lsat_1_v5_gn_2_56220 Lactuca sativa HOM05D000161 ORTHO05D229717 1.2e-28 132.9 92 67.4
SEGI_06948 Sequoiadendron giganteum HOM05D000161 ORTHO05D038839 4.2e-26 124.4 109 54.1
arahy.Tifrunner.gnm1.ann1.A1CTBX Arachis hypogaea HOM05D000161 ORTHO05D083724 2.1e-25 122.1 159 45.3
Lj1A206G50 Lonicera japonica HOM05D000161 ORTHO05D235408 8.5e-19 100.1 105 51.4
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 1.6e-17 95.9 62 72.6
SEGI_02592 Sequoiadendron giganteum HOM05D000161 ORTHO05D039009 3.4e-15 88.2 56 76.8
Medtr3g438040 Medicago truncatula HOM05D000161 ORTHO05D036718 1.6e-12 79.3 39 87.2
arahy.Tifrunner.gnm1.ann1.0H5KQ4 Arachis hypogaea HOM05D000161 ORTHO05D009031 2.5e-10 72.0 43 69.8
A03p30570 Brassica napus HOM05D000161 ORTHO05D041164 7.5e-07 60.5 40 72.5
BraA03t12237Z Brassica rapa HOM05D000161 ORTHO05D041164 6.3e-06 57.4 73 46.6


User provided reference genes

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