Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005230g0050 Nicotiana tabacum HOM05D004020 ORTHO05D004735 2.6e-141 505.4 256 100.0
Nitab4.5_0000173g0340 Nicotiana tabacum HOM05D004020 ORTHO05D004735 9.2e-78 294.3 624 37.0
Nitab4.5_0027393g0010 Nicotiana tabacum HOM05D004020 ORTHO05D004735 3.7e-71 272.3 165 87.9
Sopen11g026290 Solanum pennellii HOM05D004020 ORTHO05D004735 6.0e-61 238.4 162 80.9
CAN.G644.49 Capsicum annuum HOM05D004020 ORTHO05D004735 2.1e-58 229.9 162 79.0
Peaxi162Scf00150g00916 Petunia axillaris HOM05D004020 ORTHO05D004735 2.1e-58 229.9 192 71.9
CSS0033419 Camellia sinensis var. sinensis HOM05D004020 ORTHO05D004735 2.0e-40 170.2 162 63.0
Oeu007301.5 Olea europaea HOM05D004020 ORTHO05D004735 4.2e-38 162.5 162 59.3
MSTRG.18711 Avicennia marina HOM05D004020 ORTHO05D004735 1.6e-37 160.6 161 55.9
Migut.D02305 Erythranthe guttata HOM05D004020 ORTHO05D004735 2.1e-37 160.2 160 58.1
Rhsim13G0102300 Rhododendron simsii HOM05D004020 ORTHO05D004735 4.6e-37 159.1 162 59.3
Cc01_g10110 Coffea canephora HOM05D004020 ORTHO05D004735 7.9e-37 158.3 162 58.0
TAR633G0695 Trochodendron aralioides HOM05D004020 ORTHO05D004735 1.9e-35 153.7 165 54.5
Actinidia07194 Actinidia chinensis HOM05D004020 ORTHO05D004735 7.4e-35 151.8 162 57.4
Actinidia24157 Actinidia chinensis HOM05D004020 ORTHO05D004735 7.4e-35 151.8 161 57.8
Lj2A1002G14 Lonicera japonica HOM05D004020 ORTHO05D004735 7.4e-35 151.8 165 53.9
Lj2C1000T5 Lonicera japonica HOM05D004020 ORTHO05D004735 2.1e-34 150.2 173 53.2
SalBow6G5048 Salvia bowleyana HOM05D004020 ORTHO05D004735 2.1e-34 150.2 158 57.0
vmacro03245 Vaccinium macrocarpon HOM05D004020 ORTHO05D004735 2.1e-34 150.2 160 56.9
Oeu008367.3 Olea europaea HOM05D004020 ORTHO05D004735 6.2e-34 148.7 162 56.8
Atru.chr3.3492 Acer truncatum HOM05D004020 ORTHO05D004735 1.1e-33 147.9 162 54.3
SGA_v2.0_scaffold27G11582 Striga asiatica HOM05D004020 ORTHO05D004735 2.0e-32 143.7 161 52.8
GSVIVG01031444001 Vitis vinifera HOM05D004020 ORTHO05D004735 3.4e-32 142.9 162 51.9
Lsat_1_v5_gn_6_42101 Lactuca sativa HOM05D004020 ORTHO05D004735 5.8e-32 142.1 158 50.6
Lj3g0000902 Lotus japonicus HOM05D004020 ORTHO05D004735 9.9e-32 141.4 166 51.2
Duzib168G0446 Durio zibethinus HOM05D004020 ORTHO05D004735 1.3e-31 141.0 166 50.6
Gorai.009G089000 Gossypium raimondii HOM05D004020 ORTHO05D004735 1.7e-31 140.6 162 53.1
Glyma.11G191100 Glycine max HOM05D004020 ORTHO05D004735 4.9e-31 139.0 162 50.0
Gohir.A05G084400 Gossypium hirsutum HOM05D004020 ORTHO05D004735 4.9e-31 139.0 166 51.2
TWI75G0197 Tripterygium wilfordii HOM05D004020 ORTHO05D004735 4.9e-31 139.0 162 52.5
Lalb_Chr01g0004661 Lupinus albus HOM05D004020 ORTHO05D004735 6.4e-31 138.7 167 49.7
Gohir.D05G087200 Gossypium hirsutum HOM05D004020 ORTHO05D004735 8.4e-31 138.3 162 52.5
PSO801G0568 Papaver somniferum HOM05D004020 ORTHO05D004735 1.4e-30 137.5 162 51.9
CDE08G1223 Ceratophyllum demersum HOM05D004020 ORTHO05D004735 1.9e-30 137.1 162 52.5
Gohir.D07G110000 Gossypium hirsutum HOM05D004020 ORTHO05D004735 1.9e-30 137.1 167 49.7
Medtr4g056510 Medicago truncatula HOM05D004020 ORTHO05D004735 1.9e-30 137.1 167 49.7
PSO339G0247 Papaver somniferum HOM05D004020 ORTHO05D004735 2.5e-30 136.7 162 51.9
Phvul.011G088000 Phaseolus vulgaris HOM05D004020 ORTHO05D004735 2.5e-30 136.7 165 49.7
Thecc.09G295800 Theobroma cacao HOM05D004020 ORTHO05D004735 2.5e-30 136.7 166 48.8
Haze_23514 Corylus avellana HOM05D004020 ORTHO05D004735 3.2e-30 136.3 156 53.8
Duzib150G0506 Durio zibethinus HOM05D004020 ORTHO05D004735 3.2e-30 136.3 163 48.5
Lalb_Chr19g0136831 Lupinus albus HOM05D004020 ORTHO05D004735 3.2e-30 136.3 167 50.9
Glyma.12G083200 Glycine max HOM05D004020 ORTHO05D004735 4.2e-30 136.0 165 48.5
MD11G1151500 Malus domestica HOM05D004020 ORTHO05D004735 4.2e-30 136.0 164 50.0
Rhsim04G0218400 Rhododendron simsii HOM05D004020 ORTHO05D004735 4.2e-30 136.0 158 51.9
CANSAT64G0934 Cannabis sativa HOM05D004020 ORTHO05D004735 9.3e-30 134.8 165 47.9
Cfa010130 Carpinus fangiana HOM05D004020 ORTHO05D004735 9.3e-30 134.8 166 51.8
Sabra04G0148500 Salix brachista HOM05D004020 ORTHO05D004735 9.3e-30 134.8 164 50.6
Ciclev10027713m.g Citrus clementina HOM05D004020 ORTHO05D004735 1.6e-29 134.0 161 51.6
TPR.G35043 Trifolium pratense HOM05D004020 ORTHO05D004735 2.1e-29 133.7 167 47.9
FvH4_3g30380 Fragaria vesca HOM05D004020 ORTHO05D004735 3.5e-29 132.9 169 52.1
arahy.Tifrunner.gnm1.ann1.PN7A9Z Arachis hypogaea HOM05D004020 ORTHO05D004735 4.6e-29 132.5 159 52.2
CsaV3_1G014440 Cucumis sativus L. HOM05D004020 ORTHO05D004735 4.6e-29 132.5 160 54.4
arahy.Tifrunner.gnm1.ann1.B084HG Arachis hypogaea HOM05D004020 ORTHO05D004735 7.9e-29 131.7 160 51.2
MELO3C004814.2 Cucumis melo HOM05D004020 ORTHO05D004735 7.9e-29 131.7 160 53.8
Potri.009G002900 Populus trichocarpa HOM05D004020 ORTHO05D004735 7.9e-29 131.7 166 50.0
CiPaw.14G105600 Carya illinoinensis HOM05D004020 ORTHO05D004735 1.0e-28 131.3 161 50.3
FAN11G1674 Fragaria x ananassa HOM05D004020 ORTHO05D004735 1.0e-28 131.3 169 52.1
Potri.001G212600 Populus trichocarpa HOM05D004020 ORTHO05D004735 1.0e-28 131.3 159 50.3
RcHm_v2.0_Chr5g0056331 Rosa chinensis HOM05D004020 ORTHO05D004735 1.3e-28 131.0 159 50.9
FAN21G0469 Fragaria x ananassa HOM05D004020 ORTHO05D004735 2.3e-28 130.2 169 51.5
MD03G1129700 Malus domestica HOM05D004020 ORTHO05D004735 2.3e-28 130.2 159 50.9
Psat7g191400 Pisum sativum HOM05D004020 ORTHO05D004735 2.3e-28 130.2 166 45.2
ECA238G2607 Erigeron canadensis HOM05D004020 ORTHO05D004735 3.0e-28 129.8 160 49.4
Manes.11G154000 Manihot esculenta HOM05D004020 ORTHO05D004735 3.0e-28 129.8 167 50.3
ClCG01G012850 Citrullus lanatus HOM05D004020 ORTHO05D004735 3.9e-28 129.4 162 52.5
DCAR_031639 Daucus carota HOM05D004020 ORTHO05D004735 5.1e-28 129.0 160 48.1
COL.COLO4_19229 Corchorus olitorius HOM05D004020 ORTHO05D004735 6.7e-28 128.6 164 47.6
PGR102G0426 Punica granatum HOM05D004020 ORTHO05D004735 6.7e-28 128.6 152 53.3
THA.LOC104800567 Tarenaya hassleriana HOM05D004020 ORTHO05D004735 6.7e-28 128.6 162 48.1
Aqoxy2G01562 Aquilegia oxysepala HOM05D004020 ORTHO05D004735 2.5e-27 126.7 161 50.3
Prupe.6G114700 Prunus persica HOM05D004020 ORTHO05D004735 7.4e-27 125.2 162 51.2
Cpa.g.sc47.20 Carica papaya HOM05D004020 ORTHO05D004735 9.6e-27 124.8 171 46.2
Ca_19329_v3 Cicer arietinum L. HOM05D004020 ORTHO05D004735 9.6e-27 124.8 167 46.7
Gohir.A07G106066 Gossypium hirsutum HOM05D004020 ORTHO05D004735 9.6e-27 124.8 160 48.1
Sc06g0008980 Simmondsia chinensis HOM05D004020 ORTHO05D004735 9.6e-27 124.8 165 47.9
AL4G22350 Arabidopsis lyrata HOM05D004020 ORTHO05D004735 6.2e-26 122.1 161 48.4
THA.LOC104826398 Tarenaya hassleriana HOM05D004020 ORTHO05D004735 8.2e-26 121.7 163 47.9
Aa31LG5G8160 Aethionema arabicum HOM05D004020 ORTHO05D004735 1.4e-25 120.9 161 46.6
HanXRQChr14g0451831 Helianthus annuus HOM05D004020 ORTHO05D004735 2.4e-25 120.2 191 45.0
Hund00854 Selenicereus undatus HOM05D004020 ORTHO05D004735 2.4e-25 120.2 169 45.6
EL10Ac9g20998 Beta vulgaris HOM05D004020 ORTHO05D004735 4.0e-25 119.4 163 47.2
Sp4g10720 Schrenkiella parvula HOM05D004020 ORTHO05D004735 6.9e-25 118.6 161 46.6
Thhalv10016162m.g Eutrema salsugineum HOM05D004020 ORTHO05D004735 9.0e-25 118.2 161 47.2
BraA04t17688Z Brassica rapa HOM05D004020 ORTHO05D004735 1.2e-24 117.9 161 45.3
Lsat_1_v5_gn_2_99000 Lactuca sativa HOM05D004020 ORTHO05D004735 1.2e-24 117.9 180 46.1
A04p21190 Brassica napus HOM05D004020 ORTHO05D004735 1.5e-24 117.5 161 45.3
AUR62041305 Chenopodium quinoa HOM05D004020 ORTHO05D004735 2.0e-24 117.1 165 47.3
Eucgr.B03912 Eucalyptus grandis HOM05D004020 ORTHO05D004735 2.0e-24 117.1 154 48.1
Sed0021294 Sechium edule HOM05D004020 ORTHO05D004735 2.0e-24 117.1 162 48.1
AT2G27900 Arabidopsis thaliana HOM05D004020 ORTHO05D004735 2.6e-24 116.7 161 46.0
Carub.0004s0864 Capsella rubella HOM05D004020 ORTHO05D004735 2.6e-24 116.7 161 45.3
HanXRQChr02g0055251 Helianthus annuus HOM05D004020 ORTHO05D004735 2.6e-24 116.7 158 46.2
CARHR120590 Cardamine hirsuta HOM05D004020 ORTHO05D004735 7.6e-24 115.2 161 46.0
AUR62024038 Chenopodium quinoa HOM05D004020 ORTHO05D004735 7.6e-24 115.2 164 48.8
Nn2g13902 Nelumbo nucifera HOM05D004020 ORTHO05D004735 7.6e-24 115.2 167 47.3
AL4G12830 Arabidopsis lyrata HOM05D004020 ORTHO05D004735 1.0e-23 114.8 162 46.3
Ah.01g015940 Amaranthus hybridus HOM05D004020 ORTHO05D004735 4.9e-23 112.5 164 45.7
BcaB06g28175 Brassica carinata HOM05D004020 ORTHO05D004735 6.5e-23 112.1 164 44.5
Hund07762 Selenicereus undatus HOM05D004020 ORTHO05D004735 1.4e-22 110.9 194 39.7
arahy.Tifrunner.gnm1.ann1.533Y7U Arachis hypogaea HOM05D004020 ORTHO05D004735 4.2e-22 109.4 160 45.6
arahy.Tifrunner.gnm1.ann1.MMVL4X Arachis hypogaea HOM05D004020 ORTHO05D004735 5.5e-22 109.0 159 44.7
unitig_746.g26602 Utricularia gibba HOM05D004020 ORTHO05D004735 5.5e-22 109.0 155 45.2
BcaB01g03084 Brassica carinata HOM05D004020 ORTHO05D004735 9.3e-22 108.2 161 46.0
A03p26460 Brassica napus HOM05D004020 ORTHO05D004735 9.3e-22 108.2 161 45.3
BcaC01g04955 Brassica carinata HOM05D004020 ORTHO05D004735 1.6e-21 107.5 161 45.3
C03p31750 Brassica napus HOM05D004020 ORTHO05D004735 1.6e-21 107.5 161 45.3
BolC3t15517H Brassica oleracea HOM05D004020 ORTHO05D004735 1.6e-21 107.5 161 45.3
BraA03t11860Z Brassica rapa HOM05D004020 ORTHO05D004735 1.6e-21 107.5 161 45.3
MBI18_g10967_MAGBIO Magnolia biondii HOM05D004020 ORTHO05D004735 4.6e-21 105.9 165 43.0
ATR1158G033 Amborella trichopoda HOM05D004020 ORTHO05D004735 1.5e-19 100.9 156 42.9
BcaC02g08224 Brassica carinata HOM05D004020 ORTHO05D004735 7.4e-19 98.6 162 43.2
C04p57020 Brassica napus HOM05D004020 ORTHO05D004735 7.4e-19 98.6 162 43.2
BolC4t27237H Brassica oleracea HOM05D004020 ORTHO05D004735 7.4e-19 98.6 162 43.2
Os10g0546300 Oryza sativa ssp. japonica HOM05D004020 ORTHO05D004735 7.4e-19 98.6 150 43.3
Zm00001eb022740 Zea mays HOM05D004020 ORTHO05D004735 2.2e-18 97.1 163 44.8
Lj2A1002G13 Lonicera japonica HOM05D004020 ORTHO05D004735 5.0e-15 85.9 58 70.7
Dinv12567 Davidia involucrata HOM05D004020 ORTHO05D004735 9.4e-14 81.6 93 53.8
Nitab4.5_0011593g0020 Nicotiana tabacum HOM05D004020 ORTHO05D004735 1.2e-13 81.3 43 90.7
AL580U10010 Arabidopsis lyrata HOM05D004020 ORTHO05D004735 6.1e-13 79.0 54 63.0
AagrBONN_evm.TU.Sc2ySwM_340.402 Anthoceros agrestis HOM05D004020 ORTHO05D004735 2.0e-11 73.9 182 31.9
HPP92_022569 Vanilla planifolia HOM05D004020 ORTHO05D004735 2.5e-11 73.6 65 56.9
SEGI_08231 Sequoiadendron giganteum HOM05D004020 ORTHO05D004735 3.3e-11 73.2 167 37.1
Gohir.A07G106132 Gossypium hirsutum HOM05D004020 ORTHO05D004735 7.4e-11 72.0 54 61.1
Gorai.001G118200 Gossypium raimondii HOM05D004020 ORTHO05D004735 7.4e-11 72.0 54 61.1
unitig_746.g26604 Utricularia gibba HOM05D004020 ORTHO05D004735 7.4e-11 72.0 51 62.7
AagrBONN_evm.TU.Sc2ySwM_117.107 Anthoceros agrestis HOM05D004020 ORTHO05D004735 9.7e-11 71.6 177 32.8
Pp3c5_16860 Physcomitrium patens HOM05D004020 ORTHO05D004735 1.5e-08 64.3 183 30.6
Mapoly0001s0255 Marchantia polymorpha HOM05D004020 ORTHO05D004735 2.6e-08 63.5 187 30.5
Pp3c16_8720 Physcomitrium patens HOM05D004020 ORTHO05D004735 4.5e-08 62.8 178 30.3
Pp3c25_5430 Physcomitrium patens HOM05D004020 ORTHO05D004735 7.7e-08 62.0 186 30.1
SMO118G0476 Selaginella moellendorffii HOM05D004020 ORTHO05D004735 1.4e-06 57.8 152 33.6


User provided reference genes

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