Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 0.0e+00 1773.4 902 100.0
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 0.0e+00 1596.6 876 92.9
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 0.0e+00 1270.8 877 75.3
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 1.2e-265 920.2 902 53.0
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 3.6e-246 855.5 864 53.1
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.2e-244 850.5 870 51.6
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 1.9e-239 833.2 873 51.4
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 5.8e-236 821.6 846 50.8
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 2.3e-232 809.7 881 49.5
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 6.7e-232 808.1 881 49.6
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 3.3e-231 805.8 881 49.5
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 5.3e-229 798.5 893 48.0
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 6.5e-227 791.6 851 48.5
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 3.2e-226 789.3 880 48.6
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 7.9e-225 784.6 851 48.6
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 1.0e-224 784.3 844 49.5
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 1.8e-224 783.5 846 49.2
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 5.1e-224 781.9 876 48.1
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 8.7e-224 781.2 857 49.0
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 1.9e-223 780.0 847 49.5
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 1.9e-223 780.0 869 48.1
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 3.7e-222 775.8 870 47.7
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 4.8e-222 775.4 855 48.8
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 1.8e-221 773.5 879 47.6
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 3.1e-221 772.7 860 48.4
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 1.2e-220 770.8 845 49.2
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 1.4e-218 763.8 895 46.3
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 9.3e-218 761.1 850 48.6
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 2.1e-217 760.0 845 49.0
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 1.0e-216 757.7 849 48.6
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 5.7e-215 751.9 760 51.3
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 2.8e-214 749.6 851 47.0
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 1.4e-213 747.3 892 48.4
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 2.4e-213 746.5 869 46.8
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 4.1e-213 745.7 848 47.1
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 3.8e-211 739.2 845 47.7
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.9e-210 736.9 871 45.2
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 3.2e-210 736.1 871 45.2
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 2.1e-209 733.4 867 45.4
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 6.1e-209 731.9 848 46.1
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 6.7e-208 728.4 872 45.6
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 6.7e-208 728.4 842 47.9
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 2.6e-207 726.5 863 46.0
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 3.3e-207 726.1 848 46.2
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 1.3e-206 724.2 874 45.7
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.8e-206 723.0 871 44.5
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 8.2e-206 721.5 842 44.8
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 1.4e-205 720.7 874 45.4
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 2.4e-205 719.9 865 44.4
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 1.5e-204 717.2 861 44.6
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 7.7e-204 714.9 871 44.1
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 1.3e-203 714.1 852 46.4
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 2.9e-203 713.0 841 45.4
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 9.4e-202 708.0 882 45.5
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 2.1e-201 706.8 846 45.9
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 1.4e-200 704.1 884 44.1
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 2.3e-200 703.4 926 43.3
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 8.8e-200 701.4 863 45.3
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 5.7e-199 698.7 845 44.7
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 7.4e-199 698.4 846 44.7
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 9.7e-199 698.0 871 43.6
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 1.7e-198 697.2 848 45.8
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 3.7e-198 696.0 887 44.4
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 3.7e-198 696.0 871 44.3
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 6.3e-198 695.3 850 44.2
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 1.4e-197 694.1 831 45.8
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 3.6e-193 679.5 950 41.7
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 6.7e-192 675.2 851 45.1
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 2.6e-191 673.3 870 42.5
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 7.0e-189 665.2 772 46.4
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 5.9e-188 662.1 852 42.4
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 2.9e-187 659.8 853 45.1
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 2.7e-185 653.3 853 42.2
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 3.7e-182 642.9 848 43.2
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.5e-178 630.9 884 41.5
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 4.7e-177 625.9 855 41.8
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 8.0e-177 625.2 884 41.2
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 4.0e-176 622.9 886 41.2
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.0e-168 596.7 855 41.1
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 7.5e-167 592.0 845 40.7
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 4.9e-166 589.3 847 41.4
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 8.3e-166 588.6 862 40.4
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 1.0e-163 581.6 900 38.8
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 9.8e-159 565.1 836 37.6
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 3.5e-156 556.6 874 37.9
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 4.6e-156 556.2 874 37.8
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 6.0e-156 555.8 903 36.9
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 1.3e-155 554.7 859 39.9
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 8.6e-155 552.0 884 38.2
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.5e-154 551.2 675 44.1
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 2.5e-154 550.4 845 38.0
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 3.3e-154 550.1 849 37.7
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 4.3e-154 549.7 849 37.6
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 4.3e-154 549.7 849 37.6
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 5.6e-154 549.3 849 37.7
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 1.4e-152 544.7 865 37.1
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 9.8e-151 538.5 855 37.2
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 9.8e-151 538.5 863 37.3
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 2.9e-150 537.0 864 37.4
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 1.4e-149 534.6 845 37.6
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 7.1e-149 532.3 1303 30.7
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 2.8e-145 520.4 845 35.6
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 2.8e-145 520.4 757 41.7
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 8.1e-145 518.8 860 36.4
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 1.4e-144 518.1 907 36.2
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 8.9e-144 515.4 893 36.5
Ciclev10019721m.g Citrus clementina HOM05D003469 ORTHO05D004084 2.1e-140 504.2 521 51.2
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 1.0e-131 475.3 889 35.0
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 3.3e-130 470.3 878 35.6
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 4.0e-128 463.4 1379 28.0
Haze_14033 Corylus avellana HOM05D003469 ORTHO05D004084 1.7e-126 458.0 577 45.6
CDE05G0531 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 3.2e-125 453.8 464 50.0
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 6.7e-123 446.0 874 33.9
TAR633G1289 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.7e-118 431.4 410 53.9
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 1.0e-102 379.0 650 36.6
Ca_19034_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 3.9e-99 367.1 335 54.6
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.0e-94 352.4 413 46.2
PGSC0003DMG400033134 Solanum tuberosum HOM05D003469 ORTHO05D004084 1.9e-93 348.2 323 53.6
MD17G1141100 Malus domestica HOM05D003469 ORTHO05D004084 2.9e-86 324.3 312 51.3
Sp1g15780 Schrenkiella parvula HOM05D003469 ORTHO05D004084 6.1e-84 316.6 429 39.4
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 4.4e-82 310.5 1109 24.3
C04p00480 Brassica napus HOM05D003469 ORTHO05D004084 2.8e-81 307.8 797 28.5
FvH4_6g38030 Fragaria vesca HOM05D003469 ORTHO05D004084 2.2e-78 298.1 391 40.9
Cpa.g.sc21.245 Carica papaya HOM05D003469 ORTHO05D004084 7.2e-77 293.1 356 45.8
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 6.7e-75 286.6 453 36.9
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 1.1e-72 279.3 410 37.8
Oeu019664.1 Olea europaea HOM05D003469 ORTHO05D004084 1.1e-72 279.3 363 42.1
FvH4_6g38050 Fragaria vesca HOM05D003469 ORTHO05D004084 4.2e-69 267.3 815 26.6
CDE05G3544 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 1.6e-68 265.4 368 43.2
Potri.013G129500 Populus trichocarpa HOM05D003469 ORTHO05D000003 3.0e-67 261.2 377 41.1
COL.COLO4_25121 Corchorus olitorius HOM05D003469 ORTHO05D004084 4.8e-65 253.8 364 41.5
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 1.2e-63 249.2 472 33.3
SHI03012 Sapria himalayana HOM05D003469 ORTHO05D004084 5.9e-63 246.9 271 47.2
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 2.6e-58 231.5 630 27.0
HanXRQChr13g0406831 Helianthus annuus HOM05D003469 ORTHO05D004084 4.9e-57 227.3 183 56.3
Ca_16139_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 4.7e-52 210.7 347 36.9
FAN20G2279 Fragaria x ananassa HOM05D003469 ORTHO05D004084 8.0e-52 209.9 504 30.0
SEGI_08666 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 6.8e-51 206.8 178 57.9
vmacro23125 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 1.2e-50 206.1 458 32.5
SHI03015 Sapria himalayana HOM05D003469 ORTHO05D004084 4.6e-47 194.1 250 42.0
C04p00500 Brassica napus HOM05D003469 ORTHO05D004084 8.3e-41 173.3 350 32.6
COL.COLO4_25120 Corchorus olitorius HOM05D003469 ORTHO05D004084 4.1e-40 171.0 466 31.3
Medtr4g074690 Medicago truncatula HOM05D003469 ORTHO05D004084 9.2e-40 169.9 250 38.8
Oeu035042.1 Olea europaea HOM05D003469 ORTHO05D004084 1.1e-37 162.9 272 38.6
Actinidia02459 Actinidia chinensis HOM05D003469 ORTHO05D004084 4.0e-35 154.5 120 59.2
Thhalv10002713m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 2.9e-33 148.3 139 51.8
Ciclev10020572m.g Citrus clementina HOM05D003469 ORTHO05D004084 4.9e-33 147.5 301 33.2
QL09p054785 Quercus lobata HOM05D003469 ORTHO05D004084 7.8e-31 140.2 184 46.7
Cre10.g464950 Chlamydomonas reinhardtii HOM05D003469 ORTHO05D004084 1.8e-27 129.0 365 27.7
SEGI_05114 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 1.8e-27 129.0 147 44.2
Sabra13G0107500 Salix brachista HOM05D000001 ORTHO05D000003 6.8e-27 127.1 171 47.4
Ca_16140_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 2.6e-26 125.2 157 40.8
BcaC02g12573 Brassica carinata HOM05D003469 ORTHO05D004084 3.4e-26 124.8 242 31.8
Psat0s3379g0040 Pisum sativum HOM05D003469 ORTHO05D004084 8.4e-25 120.2 125 49.6
BcaC02g12574 Brassica carinata HOM05D003469 ORTHO05D004084 1.1e-24 119.8 101 56.4
Cpa.g.sc21.244 Carica papaya HOM05D003469 ORTHO05D004084 2.4e-24 118.6 89 66.3
ECA232G2749 Erigeron canadensis HOM05D001807 ORTHO05D002044 1.2e-23 116.3 122 49.2
Haze_14034 Corylus avellana HOM05D003469 ORTHO05D004084 4.6e-23 114.4 131 46.6
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.3e-22 112.1 80 68.8
SEGI_26656 Sequoiadendron giganteum HOM05D003469 ORTHO05D000001 3.0e-22 111.7 159 44.7
Ca_16137_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 4.7e-20 104.4 184 36.4
Aa31LG2G17580 Aethionema arabicum HOM05D003469 ORTHO05D004084 8.1e-20 103.6 80 57.5
ATR0002G001 Amborella trichopoda HOM05D003469 ORTHO05D004084 1.4e-19 102.8 80 57.5
Psat0s3379g0080 Pisum sativum HOM05D003469 ORTHO05D004084 3.1e-19 101.7 197 35.5
Glyma.07G124800 Glycine max HOM05D003469 ORTHO05D004084 1.1e-16 93.2 150 36.7
Haze_14035 Corylus avellana HOM05D003469 ORTHO05D004084 4.6e-15 87.8 117 45.3
Lsat_1_v5_gn_0_35341 Lactuca sativa HOM05D003469 ORTHO05D004084 1.5e-13 82.8 141 31.9
FAN20G1461 Fragaria x ananassa HOM05D003469 ORTHO05D004084 7.3e-13 80.5 125 38.4
SHI03013 Sapria himalayana HOM05D003469 ORTHO05D004084 3.6e-12 78.2 103 41.7
Cpa.g.sc21.247 Carica papaya HOM05D003469 ORTHO05D004084 8.1e-12 77.0 95 47.4
SEGI_39938 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 9.0e-11 73.6 124 33.9
Oeu026515.1 Olea europaea HOM05D003469 ORTHO05D004084 9.9e-10 70.1 90 38.9
Actinidia02458 Actinidia chinensis HOM05D003469 ORTHO05D004084 6.4e-09 67.4 67 58.2
Ca_19033_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 2.1e-07 62.4 61 49.2


User provided reference genes

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