Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005193g0040 Nicotiana tabacum HOM05D004769 ORTHO05D005605 3.8e-135 485.3 347 100.0
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 3.1e-129 465.7 339 99.1
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 8.5e-119 431.0 339 91.7
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 2.4e-113 412.9 340 89.4
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 7.0e-113 411.4 340 90.3
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 1.7e-111 406.8 348 88.2
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 5.0e-111 405.2 339 87.3
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 3.6e-85 319.3 346 69.7
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 8.3e-82 308.1 340 66.2
Dinv28230 Davidia involucrata HOM05D004769 ORTHO05D005605 1.4e-81 307.4 344 65.7
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 5.6e-78 295.4 337 63.5
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 3.6e-77 292.7 352 71.6
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 4.7e-77 292.4 345 60.3
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 1.8e-76 290.4 351 68.7
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.6e-75 285.0 341 60.4
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 2.9e-74 283.1 360 70.3
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 8.3e-74 281.6 341 62.8
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 8.3e-74 281.6 345 62.3
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 5.4e-73 278.9 346 63.6
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 9.2e-73 278.1 347 66.3
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 2.7e-72 276.6 351 52.4
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 3.5e-72 276.2 341 65.4
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 1.3e-71 274.2 349 64.2
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 5.1e-71 272.3 343 69.7
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 1.1e-70 271.2 342 65.8
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 1.5e-70 270.8 349 59.3
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 1.9e-70 270.4 348 63.5
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 3.3e-70 269.6 346 64.2
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 9.6e-70 268.1 353 53.0
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 2.8e-69 266.5 342 66.4
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 4.7e-69 265.8 341 65.1
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 4.7e-69 265.8 408 52.9
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 4.7e-69 265.8 343 59.8
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 8.1e-69 265.0 344 68.9
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 1.1e-68 264.6 348 70.4
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 1.8e-68 263.8 351 65.2
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 1.8e-68 263.8 349 71.9
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 2.4e-68 263.5 345 63.2
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 2.4e-68 263.5 362 64.9
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 3.1e-68 263.1 342 68.7
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 6.8e-68 261.9 342 63.7
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 6.8e-68 261.9 353 66.9
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 8.9e-68 261.5 417 59.5
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.5e-67 260.8 341 47.2
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 2.6e-67 260.0 314 72.6
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 5.8e-67 258.8 342 70.5
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 1.3e-66 257.7 168 77.4
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 1.3e-66 257.7 342 69.9
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 1.3e-66 257.7 343 66.2
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 1.7e-66 257.3 357 57.4
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 2.2e-66 256.9 341 69.5
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 3.8e-66 256.1 359 54.9
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 3.8e-66 256.1 343 50.1
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 8.4e-66 255.0 352 66.2
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 1.4e-65 254.2 359 54.9
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 1.4e-65 254.2 348 59.2
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 4.2e-65 252.7 342 71.1
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 4.2e-65 252.7 344 70.3
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 4.2e-65 252.7 346 67.6
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 5.4e-65 252.3 341 49.6
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 7.1e-65 251.9 349 69.1
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 7.1e-65 251.9 341 68.9
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 1.6e-64 250.8 357 60.5
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 1.6e-64 250.8 352 63.6
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 4.6e-64 249.2 167 72.5
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 6.0e-64 248.8 353 65.4
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 1.0e-63 248.1 357 53.5
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 1.7e-63 247.3 344 60.2
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 1.7e-63 247.3 354 58.8
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 3.0e-63 246.5 353 62.0
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 1.1e-62 244.6 346 65.6
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 1.1e-62 244.6 351 61.3
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 1.1e-62 244.6 345 49.0
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 7.3e-62 241.9 358 58.9
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 7.3e-62 241.9 342 59.6
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 2.1e-61 240.4 417 50.1
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 8.1e-61 238.4 340 44.1
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 1.1e-60 238.0 350 65.1
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 1.4e-60 237.7 389 58.6
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 1.4e-60 237.7 344 59.6
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 2.4e-60 236.9 149 80.5
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 5.3e-60 235.7 395 59.7
Duzib211G0206 Durio zibethinus HOM05D004769 ORTHO05D005605 2.0e-59 233.8 324 69.8
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 4.4e-59 232.6 327 61.8
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 4.4e-59 232.6 340 64.1
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 7.6e-59 231.9 359 52.4
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 1.3e-58 231.1 358 56.7
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 1.7e-58 230.7 356 60.7
Ciclev10015797m.g Citrus clementina HOM05D004769 ORTHO05D005605 3.8e-58 229.6 316 65.5
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 1.4e-57 227.6 340 55.9
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 1.4e-57 227.6 162 72.2
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.4e-57 226.9 346 56.4
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 3.2e-57 226.5 345 48.1
Sed0026946 Sechium edule HOM05D004769 ORTHO05D005605 5.4e-57 225.7 347 64.0
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 7.1e-57 225.3 330 58.5
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 7.1e-57 225.3 358 49.7
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.6e-56 224.2 340 57.9
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 2.1e-56 223.8 342 57.0
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 7.9e-56 221.9 139 76.3
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 2.3e-55 220.3 377 62.9
Zm00001eb283000 Zea mays HOM05D004769 ORTHO05D005605 2.3e-55 220.3 331 59.8
SEGI_40758 Sequoiadendron giganteum HOM05D004769 ORTHO05D005605 3.9e-55 219.5 148 73.6
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 1.3e-53 214.5 340 65.9
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 1.6e-53 214.2 342 58.8
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 3.6e-53 213.0 147 74.1
Manes.02G080000 Manihot esculenta HOM05D004769 ORTHO05D005605 6.2e-53 212.2 326 65.3
CDE02G1258 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 3.1e-52 209.9 325 53.8
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 9.9e-51 204.9 131 74.0
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 4.2e-49 199.5 167 62.9
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 1.6e-48 197.6 146 68.5
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 1.6e-48 197.6 146 68.5
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 5.1e-47 192.6 167 60.5
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 1.1e-46 191.4 133 67.7
AT5G37370 Arabidopsis thaliana HOM05D004769 ORTHO05D005605 7.4e-46 188.7 322 55.6
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 4.8e-45 186.0 171 61.4
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 2.0e-43 180.6 130 67.7
Psat2g044720 Pisum sativum HOM05D004769 ORTHO05D005605 1.0e-39 168.3 296 68.9
Lalb_Chr10g0104101 Lupinus albus HOM05D004769 ORTHO05D005605 1.8e-39 167.5 292 63.4
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 2.4e-36 157.1 388 34.8
Actinidia28787 Actinidia chinensis HOM05D004769 ORTHO05D005605 2.0e-27 127.5 331 45.3
PRCOL_00000163 Prasinoderma coloniale HOM05D004769 ORTHO05D005605 7.7e-27 125.6 121 53.7
FAN07G1815 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.8e-26 123.2 262 54.2
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 2.5e-25 120.6 177 44.6
MCO07G113 Micromonas commoda HOM05D004769 ORTHO05D005605 1.0e-23 115.2 135 45.2
CDE02G3274 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 2.3e-23 114.0 59 83.1
CSS0036345 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 3.9e-23 113.2 289 58.1
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 3.9e-23 113.2 92 63.0
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.0e-22 110.9 293 49.8
ATR0127G005 Amborella trichopoda HOM05D004769 ORTHO05D005605 9.1e-20 102.1 77 70.1
Lalb_Chr10g0104091 Lupinus albus HOM05D004769 ORTHO05D005605 1.2e-19 101.7 53 84.9
Lj2g0009880 Lotus japonicus HOM05D004769 ORTHO05D005605 5.9e-19 99.4 54 79.6
CSS0045560 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 1.1e-17 95.1 54 79.6
Lj1g0013083 Lotus japonicus HOM05D004769 ORTHO05D005605 1.9e-17 94.4 60 70.0
CDE02G3573 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 4.7e-16 89.7 268 38.1
Lj1g0013060 Lotus japonicus HOM05D004769 ORTHO05D005605 1.5e-14 84.7 45 77.8
CDE02G0598 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 2.8e-13 80.5 49 69.4
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 4.1e-12 76.6 63 54.0
AagrBONN_evm.TU.Sc2ySwM_344.2680 Anthoceros agrestis HOM05D004769 ORTHO05D005605 1.4e-07 61.6 247 52.6
FAN23G0276 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.4e-07 61.6 57 54.4


User provided reference genes

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