Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005181g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 3.6e-50 201.1 88 100.0
Nitab4.5_0013082g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.5e-40 167.5 87 86.2
Nitab4.5_0000894g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.9e-38 162.2 87 82.8
Nitab4.5_0002837g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 7.9e-37 156.8 87 80.5
Nitab4.5_0012359g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.3e-36 155.2 80 81.2
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 5.1e-36 154.1 87 78.2
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 4.0e-33 144.4 83 74.7
Nitab4.5_0003490g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.2e-31 138.7 82 72.0
Nitab4.5_0001238g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 3.8e-31 137.9 77 72.7
Nitab4.5_0001243g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000126 7.9e-29 130.2 83 66.3
Nitab4.5_0001659g0050 Nicotiana tabacum HOM05D007931 ORTHO05D014660 5.8e-24 114.0 86 65.1
Nitab4.5_0010531g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.6e-21 104.4 50 88.0
Nitab4.5_0004048g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 7.9e-21 103.6 52 86.5
Cc00_g29920 Coffea canephora HOM05D000003 ORTHO05D000126 4.1e-17 91.3 81 42.0
Nitab4.5_0011919g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 7.7e-16 87.0 47 80.9
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 6.1e-13 77.4 80 42.5
SGA_v2.0_scaffold7G03666 Striga asiatica HOM05D000198 ORTHO05D005702 7.9e-13 77.0 81 37.0
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.0e-12 76.6 38 84.2
Rhsim03G0095500 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.0e-11 72.4 81 32.1
Nitab4.5_0004512g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 7.4e-11 70.5 77 48.1
Nitab4.5_0003244g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.3e-10 69.7 47 61.7
Nitab4.5_0000128g0370 Nicotiana tabacum HOM05D007931 ORTHO05D000126 1.7e-10 69.3 35 85.7
Nitab4.5_0011919g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.8e-10 68.6 39 74.4
Rhsim04G0089300 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.1e-09 65.1 73 31.5
RhsimUnG0029000 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.1e-09 65.1 73 31.5
CAN.G155.11 Capsicum annuum HOM05D007931 ORTHO05D000126 5.3e-09 64.3 38 68.4
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.3e-09 64.3 75 33.3
Dinv23276 Davidia involucrata HOM05D000003 ORTHO05D000126 6.9e-09 63.9 79 35.4
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 6.9e-09 63.9 81 38.3
Rhsim06G0052000 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.2e-08 63.2 67 34.3
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 1.2e-08 63.2 80 31.2
Haze_24509 Corylus avellana HOM05D000003 ORTHO05D000126 2.6e-08 62.0 78 34.6
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.6e-08 62.0 76 31.6
QL10p065510 Quercus lobata HOM05D000003 ORTHO05D000126 4.5e-08 61.2 74 35.1
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.5e-08 61.2 76 30.3
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 4.5e-08 61.2 66 28.8
QL02p016877 Quercus lobata HOM05D000003 ORTHO05D000126 5.9e-08 60.8 60 38.3
Rhsim07G0115800 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.9e-08 60.8 76 30.3
Dinv19479 Davidia involucrata HOM05D000077 ORTHO05D000339 1.7e-07 59.3 60 36.7
Dinv32967 Davidia involucrata HOM05D000280 ORTHO05D003998 1.7e-07 59.3 60 36.7
Dinv17959 Davidia involucrata HOM05D000003 ORTHO05D000126 2.2e-07 58.9 66 36.4
QL05p063451 Quercus lobata HOM05D000003 ORTHO05D000126 2.2e-07 58.9 72 36.1
QL09p041419 Quercus lobata HOM05D000003 ORTHO05D000126 2.2e-07 58.9 60 36.7
QL03p033500 Quercus lobata HOM05D000003 ORTHO05D000126 2.9e-07 58.5 59 37.3
Rhsim02G0038900 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.9e-07 58.5 57 36.8
QL05p080911 Quercus lobata HOM05D000774 ORTHO05D000602 3.8e-07 58.2 54 38.9
Rhsim01G0112200 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.8e-07 58.2 57 36.8
Dinv15867 Davidia involucrata HOM05D000003 ORTHO05D000126 5.0e-07 57.8 74 35.1
QL05p070403 Quercus lobata HOM05D000003 ORTHO05D000126 5.0e-07 57.8 61 32.8
QL04p035033 Quercus lobata HOM05D000003 ORTHO05D000126 6.5e-07 57.4 60 31.7
QL08p037895 Quercus lobata HOM05D000003 ORTHO05D000126 6.5e-07 57.4 60 36.7
TWI34G0137 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 6.5e-07 57.4 79 34.2
Dinv10341 Davidia involucrata HOM05D001724 ORTHO05D007284 8.5e-07 57.0 69 36.2
Dinv25744 Davidia involucrata HOM05D000003 ORTHO05D000126 8.5e-07 57.0 78 30.8
QL05p054887 Quercus lobata HOM05D000003 ORTHO05D000126 8.5e-07 57.0 61 31.1
QL08p005062 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-06 56.6 64 34.4
Haze_09938 Corylus avellana HOM05D000003 ORTHO05D000126 1.4e-06 56.2 85 30.6
QL03p061024 Quercus lobata HOM05D000003 ORTHO05D000126 1.4e-06 56.2 60 36.7
Atru.chr7.382 Acer truncatum HOM05D000003 ORTHO05D000126 1.9e-06 55.8 86 29.1
EL10Ac3g06740 Beta vulgaris HOM05D000003 ORTHO05D000007 1.9e-06 55.8 71 33.8
COL.COLO4_06478 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.9e-06 55.8 73 30.1
Dinv23120 Davidia involucrata HOM05D000003 ORTHO05D000126 1.9e-06 55.8 81 27.2
Lj2g0016312 Lotus japonicus HOM05D000003 ORTHO05D000126 2.5e-06 55.5 73 26.0
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.5e-06 55.5 82 23.2
TWI38G1337 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 2.5e-06 55.5 79 31.6
Dinv06062 Davidia involucrata HOM05D000003 ORTHO05D000126 3.2e-06 55.1 75 32.0
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 3.2e-06 55.1 75 30.7
Eucgr.H02687 Eucalyptus grandis HOM05D000003 ORTHO05D000126 3.2e-06 55.1 79 29.1
Lj2g0018291 Lotus japonicus HOM05D000003 ORTHO05D000126 3.2e-06 55.1 73 30.1
Lj3g0026885 Lotus japonicus HOM05D000003 ORTHO05D000126 3.2e-06 55.1 73 30.1
LjContig00081g0010359 Lotus japonicus HOM05D000003 ORTHO05D000006 3.2e-06 55.1 73 30.1
Nitab4.5_0007471g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000126 3.2e-06 55.1 29 82.8
QL04p011564 Quercus lobata HOM05D000009 ORTHO05D000126 3.2e-06 55.1 54 40.7
QL10p031737 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-06 55.1 54 40.7
Rhsim01G0174000 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.2e-06 55.1 66 33.3
COL.COLO4_11269 Corchorus olitorius HOM05D013553 ORTHO05D000126 4.2e-06 54.7 67 32.8
Eucgr.B01330 Eucalyptus grandis HOM05D000003 ORTHO05D000126 4.2e-06 54.7 52 34.6
QL08p033637 Quercus lobata HOM05D000003 ORTHO05D000006 4.2e-06 54.7 67 28.4
SGA_v2.0_scaffold302G47838 Striga asiatica HOM05D044967 ORTHO05D000126 4.2e-06 54.7 80 26.2
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 5.5e-06 54.3 76 34.2
COL.COLO4_27452 Corchorus olitorius HOM05D013553 ORTHO05D000126 5.5e-06 54.3 73 27.4
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 5.5e-06 54.3 75 29.3
QL04p035145 Quercus lobata HOM05D000003 ORTHO05D000126 5.5e-06 54.3 60 31.7
QL04p035160 Quercus lobata HOM05D000003 ORTHO05D000126 5.5e-06 54.3 60 31.7
SGA_v2.0_scaffold68G22947 Striga asiatica HOM05D025057 ORTHO05D000126 5.5e-06 54.3 61 34.4
SGA_v2.0_scaffold78G25389 Striga asiatica HOM05D002880 ORTHO05D003450 5.5e-06 54.3 54 33.3
TWI23G1165 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 5.5e-06 54.3 77 29.9
Gorai.005G136600 Gossypium raimondii HOM05D000003 ORTHO05D000126 7.2e-06 53.9 73 32.9
Nitab4.5_0001383g0080 Nicotiana tabacum HOM05D007931 ORTHO05D000126 7.2e-06 53.9 29 79.3
QL11p047246 Quercus lobata HOM05D000003 ORTHO05D000126 7.2e-06 53.9 54 37.0
SHI06522 Sapria himalayana HOM05D000003 ORTHO05D000126 7.2e-06 53.9 60 35.0
COL.COLO4_27112 Corchorus olitorius HOM05D021065 ORTHO05D000126 9.4e-06 53.5 73 31.5
LjContig00408g0002404 Lotus japonicus HOM05D000003 ORTHO05D000126 9.4e-06 53.5 73 28.8
QL01p000290 Quercus lobata HOM05D000003 ORTHO05D000126 9.4e-06 53.5 73 31.5
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 9.4e-06 53.5 83 26.5
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 9.4e-06 53.5 82 28.0
QL05p001179 Quercus lobata HOM05D000003 ORTHO05D000126 9.4e-06 53.5 67 31.3
QL05p085174 Quercus lobata HOM05D000003 ORTHO05D000126 9.4e-06 53.5 60 30.0
QL07p019949 Quercus lobata HOM05D000003 ORTHO05D000006 9.4e-06 53.5 61 37.7


User provided reference genes

Program Settings