Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005161g0130 Nicotiana tabacum HOM05D005629 ORTHO05D008000 2.5e-184 648.7 334 100.0
Nitab4.5_0000559g0400 Nicotiana tabacum HOM05D005629 ORTHO05D008000 9.9e-173 610.1 333 94.9
PGSC0003DMG400013378 Solanum tuberosum HOM05D005629 ORTHO05D008000 1.2e-149 533.5 295 91.2
Peaxi162Scf00700g00023 Petunia axillaris HOM05D005629 ORTHO05D008000 6.4e-148 527.7 362 80.1
Solyc03g005000.4 Solanum lycopersicum HOM05D005629 ORTHO05D008000 1.4e-147 526.6 295 89.8
Sopen03g001010 Solanum pennellii HOM05D005629 ORTHO05D008000 1.4e-147 526.6 295 89.8
CAN.G1751.5 Capsicum annuum HOM05D005629 ORTHO05D008000 2.1e-146 522.7 331 83.4
Eucgr.I01649 Eucalyptus grandis HOM05D005629 ORTHO05D008000 9.6e-144 513.8 310 83.2
Cfa007230 Carpinus fangiana HOM05D005629 ORTHO05D008000 4.8e-143 511.5 332 80.7
CANSAT64G1539 Cannabis sativa HOM05D005629 ORTHO05D008000 1.4e-142 510.0 286 88.5
Haze_14872 Corylus avellana HOM05D005629 ORTHO05D008000 1.4e-142 510.0 334 79.3
Hma1.2p1_1278F.1_g272330 Hydrangea macrophylla HOM05D005629 ORTHO05D008000 1.4e-142 510.0 320 80.9
Oeu058781.1 Olea europaea HOM05D005629 ORTHO05D008000 1.4e-142 510.0 333 79.3
SalBow4G2288 Salvia bowleyana HOM05D005629 ORTHO05D008000 5.3e-142 508.1 318 81.8
SGA_v2.0_scaffold253G45198 Striga asiatica HOM05D005629 ORTHO05D008000 1.2e-141 506.9 303 84.2
Cc07_g00800 Coffea canephora HOM05D005629 ORTHO05D008000 1.5e-141 506.5 340 78.2
CiPaw.03G055300 Carya illinoinensis HOM05D005629 ORTHO05D008000 2.0e-141 506.1 339 79.1
Dinv33339 Davidia involucrata HOM05D005629 ORTHO05D008000 3.4e-141 505.4 326 79.1
GSVIVG01033097001 Vitis vinifera HOM05D005629 ORTHO05D008000 4.5e-141 505.0 281 89.0
Actinidia36200 Actinidia chinensis HOM05D005629 ORTHO05D008000 7.6e-141 504.2 296 86.1
Atru.chr6.2566 Acer truncatum HOM05D005629 ORTHO05D008000 4.9e-140 501.5 276 88.4
Ciclev10015840m.g Citrus clementina HOM05D005629 ORTHO05D008000 4.9e-140 501.5 332 79.2
Prupe.3G305800 Prunus persica HOM05D005629 ORTHO05D008000 6.5e-140 501.1 283 87.6
ClCG05G013480 Citrullus lanatus HOM05D005629 ORTHO05D008000 1.4e-139 500.0 328 76.8
CSS0048682 Camellia sinensis var. sinensis HOM05D005629 ORTHO05D004503 1.9e-139 499.6 295 85.4
RcHm_v2.0_Chr2g0175511 Rosa chinensis HOM05D005629 ORTHO05D008000 2.5e-139 499.2 336 78.6
COL.COLO4_17207 Corchorus olitorius HOM05D005629 ORTHO05D008000 4.2e-139 498.4 279 88.2
arahy.Tifrunner.gnm1.ann1.26H0NE Arachis hypogaea HOM05D005629 ORTHO05D008000 7.1e-139 497.7 290 85.5
QL02p071469 Quercus lobata HOM05D005629 ORTHO05D008000 7.1e-139 497.7 288 85.8
Lalb_Chr14g0363391 Lupinus albus HOM05D005629 ORTHO05D008000 1.2e-138 496.9 314 80.3
Migut.F00066 Erythranthe guttata HOM05D005629 ORTHO05D008000 1.6e-138 496.5 333 78.7
Sc03g0006560 Simmondsia chinensis HOM05D005629 ORTHO05D008000 1.6e-138 496.5 283 83.7
FAN09G2642 Fragaria x ananassa HOM05D005629 ORTHO05D008000 2.1e-138 496.1 330 78.5
MD09G1011200 Malus domestica HOM05D005629 ORTHO05D008000 2.7e-138 495.7 279 87.8
ECA246G2396 Erigeron canadensis HOM05D005629 ORTHO05D008000 3.5e-138 495.4 332 76.2
Sed0004120 Sechium edule HOM05D005629 ORTHO05D008000 3.5e-138 495.4 313 77.6
Actinidia05920 Actinidia chinensis HOM05D005629 ORTHO05D008000 1.0e-137 493.8 296 84.8
FvH4_6g53470 Fragaria vesca HOM05D005629 ORTHO05D008000 1.0e-137 493.8 331 78.9
Lju41A52T99 Lonicera japonica HOM05D005629 ORTHO05D008000 1.0e-137 493.8 295 84.4
Thecc.04G035600 Theobroma cacao HOM05D005629 ORTHO05D008000 1.0e-137 493.8 296 83.4
Glyma.16G056900 Glycine max HOM05D005629 ORTHO05D008000 1.3e-137 493.4 278 87.8
HanXRQChr17g0550111 Helianthus annuus HOM05D005629 ORTHO05D008000 1.8e-137 493.0 336 75.9
BcaC06g33860 Brassica carinata HOM05D005629 ORTHO05D008000 3.0e-137 492.3 330 76.4
BraA06t27073Z Brassica rapa HOM05D005629 ORTHO05D008000 3.0e-137 492.3 330 76.4
Cpa.g.sc171.18 Carica papaya HOM05D005629 ORTHO05D008000 3.0e-137 492.3 332 75.6
CsaV3_3G027030 Cucumis sativus L. HOM05D005629 ORTHO05D008000 3.0e-137 492.3 330 76.7
Gohir.D07G235300 Gossypium hirsutum HOM05D005629 ORTHO05D008000 6.7e-137 491.1 295 82.4
BolC7t44133H Brassica oleracea HOM05D005629 ORTHO05D008000 8.7e-137 490.7 330 76.1
PGR142G0641 Punica granatum HOM05D005629 ORTHO05D008000 8.7e-137 490.7 336 77.1
THA.LOC104825621 Tarenaya hassleriana HOM05D005629 ORTHO05D008000 1.1e-136 490.3 293 83.3
C07p36170 Brassica napus HOM05D005629 ORTHO05D008000 4.3e-136 488.4 330 76.1
TWI56G1125 Tripterygium wilfordii HOM05D005629 ORTHO05D008000 4.3e-136 488.4 334 76.0
Gorai.001G271100 Gossypium raimondii HOM05D005629 ORTHO05D008000 7.4e-136 487.6 296 82.4
Sp2g16240 Schrenkiella parvula HOM05D005629 ORTHO05D008000 7.4e-136 487.6 296 82.8
A06p41480 Brassica napus HOM05D005629 ORTHO05D008000 1.3e-135 486.9 330 76.1
Gohir.A11G064500 Gossypium hirsutum HOM05D005629 ORTHO05D008000 2.1e-135 486.1 274 85.8
Psat3g164800 Pisum sativum HOM05D005629 ORTHO05D008000 2.1e-135 486.1 283 85.9
Aqoxy3G01541 Aquilegia oxysepala HOM05D005629 ORTHO05D008000 3.7e-135 485.3 288 83.7
Gohir.D11G068800 Gossypium hirsutum HOM05D005629 ORTHO05D008000 3.7e-135 485.3 274 85.4
unitig_52.g17654 Utricularia gibba HOM05D005629 ORTHO05D008000 3.7e-135 485.3 284 84.9
VMungo1383G2395 Vigna mungo HOM05D005629 ORTHO05D008000 3.7e-135 485.3 290 83.4
Potri.001G330800 Populus trichocarpa HOM05D005629 ORTHO05D008000 4.8e-135 485.0 281 86.5
Lj1g0025061 Lotus japonicus HOM05D005629 ORTHO05D008000 6.3e-135 484.6 279 86.4
Phvul.001G094100 Phaseolus vulgaris HOM05D005629 ORTHO05D008000 6.3e-135 484.6 290 83.1
Carub.0005s0536 Capsella rubella HOM05D005629 ORTHO05D008000 8.2e-135 484.2 292 83.9
Gohir.A07G228100 Gossypium hirsutum HOM05D005629 ORTHO05D008000 8.2e-135 484.2 296 82.4
BcaC06g31019 Brassica carinata HOM05D005629 ORTHO05D008000 1.1e-134 483.8 297 81.5
BcaC06g33857 Brassica carinata HOM05D005629 ORTHO05D008000 1.1e-134 483.8 297 81.5
AL5G16240 Arabidopsis lyrata HOM05D005629 ORTHO05D008000 1.8e-134 483.0 291 83.8
DCAR_011309 Daucus carota HOM05D005629 ORTHO05D008000 1.8e-134 483.0 312 80.1
Thhalv10004520m.g Eutrema salsugineum HOM05D005629 ORTHO05D008000 2.4e-134 482.6 297 81.5
EL10Ac6g15359 Beta vulgaris HOM05D005629 ORTHO05D008000 4.1e-134 481.9 290 82.1
Ca_26782_v3 Cicer arietinum L. HOM05D005629 ORTHO05D008000 4.1e-134 481.9 331 76.7
Gorai.007G073600 Gossypium raimondii HOM05D005629 ORTHO05D008000 9.0e-134 480.7 275 85.1
Aa31LG2G5490 Aethionema arabicum HOM05D005629 ORTHO05D008000 1.5e-133 479.9 296 81.4
PSO017G3506 Papaver somniferum HOM05D005629 ORTHO05D008000 2.0e-133 479.6 306 79.1
TPR.G38340 Trifolium pratense HOM05D005629 ORTHO05D008000 3.4e-133 478.8 286 84.6
ATR0561G239 Amborella trichopoda HOM05D005629 ORTHO05D008000 4.5e-133 478.4 311 77.5
Ah.02g120470 Amaranthus hybridus HOM05D005629 ORTHO05D008000 5.8e-133 478.0 280 83.6
AT3G27110 Arabidopsis thaliana HOM05D005629 ORTHO05D008000 5.8e-133 478.0 291 82.8
Sabra16G0211800 Salix brachista HOM05D005629 ORTHO05D008000 5.8e-133 478.0 330 76.4
Medtr7g033405 Medicago truncatula HOM05D005629 ORTHO05D008000 2.2e-132 476.1 315 76.8
Zm00001eb127160 Zea mays HOM05D005629 ORTHO05D008000 5.1e-129 464.9 275 81.8
Os01g0970700 Oryza sativa ssp. japonica HOM05D005629 ORTHO05D008000 1.9e-128 463.0 284 79.6
Rhsim10G0006600 Rhododendron simsii HOM05D005629 ORTHO05D008000 5.3e-126 454.9 282 81.6
HPP92_024304 Vanilla planifolia HOM05D005629 ORTHO05D008000 1.2e-125 453.8 277 80.1
vmacro05954 Vaccinium macrocarpon HOM05D005629 ORTHO05D008000 2.6e-125 452.6 335 72.2
HPP92_024293 Vanilla planifolia HOM05D005629 ORTHO05D008000 7.7e-125 451.1 277 79.8
Mapoly0033s0112 Marchantia polymorpha HOM05D005629 ORTHO05D008000 1.7e-124 449.9 285 77.5
Migut.H00778 Erythranthe guttata HOM05D005629 ORTHO05D008000 2.2e-124 449.5 251 89.2
SEGI_10761 Sequoiadendron giganteum HOM05D005629 ORTHO05D008000 1.4e-123 446.8 291 74.6
Duzib264G0865 Durio zibethinus HOM05D005629 ORTHO05D008000 3.6e-122 442.2 296 76.7
Hund04337 Selenicereus undatus HOM05D005629 ORTHO05D008000 8.8e-121 437.6 364 64.3
Migut.K01513 Erythranthe guttata HOM05D005629 ORTHO05D008000 6.7e-113 411.4 261 82.0
Nn4g22342 Nelumbo nucifera HOM05D005629 ORTHO05D008000 1.2e-109 400.6 316 68.4
Dinv25662 Davidia involucrata HOM05D005629 ORTHO05D000552 3.5e-109 399.1 211 94.3
AUR62003511 Chenopodium quinoa HOM05D005629 ORTHO05D008000 4.2e-107 392.1 241 79.7
Gorai.004G126700 Gossypium raimondii HOM05D005629 ORTHO05D008000 5.2e-105 385.2 229 83.8
Gohir.D08G117950 Gossypium hirsutum HOM05D005629 ORTHO05D008000 8.2e-103 377.9 227 82.8
AUR62017822 Chenopodium quinoa HOM05D005629 ORTHO05D008000 1.1e-102 377.5 226 81.9
Migut.G01029 Erythranthe guttata HOM05D005629 ORTHO05D008000 1.1e-102 377.5 281 73.0
Cre14.g620150 Chlamydomonas reinhardtii HOM05D005629 ORTHO05D008000 1.6e-98 363.6 267 65.5
MCO03G471 Micromonas commoda HOM05D005629 ORTHO05D008000 6.8e-97 358.2 262 65.6
MELO3C014882.2 Cucumis melo HOM05D005629 ORTHO05D008000 1.1e-94 350.9 250 72.4
Manes.15G160600 Manihot esculenta HOM05D005629 ORTHO05D008000 1.1e-94 350.9 250 74.8
FAN05G5024 Fragaria x ananassa HOM05D005629 ORTHO05D008000 2.4e-94 349.7 255 73.7
FAN02G3075 Fragaria x ananassa HOM05D005629 ORTHO05D008000 1.7e-92 343.6 202 85.1
AagrBONN_evm.TU.Sc2ySwM_117.2248 Anthoceros agrestis HOM05D005629 ORTHO05D008000 2.9e-92 342.8 202 80.2
CARHR148330 Cardamine hirsuta HOM05D005629 ORTHO05D008000 4.0e-89 332.4 196 83.7
FAN14G4117 Fragaria x ananassa HOM05D005629 ORTHO05D008000 6.6e-84 315.1 316 59.5
PRCOL_00001739 Prasinoderma coloniale HOM05D005629 ORTHO05D008000 6.8e-81 305.1 263 55.9
Lsat_1_v5_gn_9_1240 Lactuca sativa HOM05D005629 ORTHO05D008000 5.0e-76 288.9 150 92.7
CDE05G1086 Ceratophyllum demersum HOM05D001132 ORTHO05D002510 1.2e-72 277.7 182 74.7
Zm00001eb202540 Zea mays HOM05D002249 ORTHO05D002443 1.4e-62 244.2 210 61.0
Migut.K01251 Erythranthe guttata HOM05D005629 ORTHO05D008000 3.0e-60 236.5 159 78.6
Zm00001eb427710 Zea mays HOM05D005629 ORTHO05D003422 9.6e-51 204.9 120 81.7
Zm00001eb174780 Zea mays HOM05D005629 ORTHO05D008000 3.6e-50 203.0 121 81.0
FvH4_6g53350 Fragaria vesca HOM05D005629 ORTHO05D022663 1.4e-49 201.1 320 39.7
FvH4_6g53390 Fragaria vesca HOM05D005629 ORTHO05D022663 1.4e-49 201.1 281 42.7
TAR622G1261 Trochodendron aralioides HOM05D005629 ORTHO05D008000 5.2e-49 199.1 111 89.2
Zm00001eb146790 Zea mays HOM05D005629 ORTHO05D003607 5.8e-48 195.7 116 82.8
Zm00001eb332250 Zea mays HOM05D002343 ORTHO05D002443 2.4e-46 190.3 128 74.2
FvH4_6g53420 Fragaria vesca HOM05D005629 ORTHO05D022663 2.7e-45 186.8 223 48.4
CDE02G4678 Ceratophyllum demersum HOM05D000139 ORTHO05D000103 3.3e-35 153.3 234 42.3
FAN14G1519 Fragaria x ananassa HOM05D005629 ORTHO05D022663 1.8e-33 147.5 284 36.3
FAN02G3684 Fragaria x ananassa HOM05D005629 ORTHO05D008000 3.4e-32 143.3 74 91.9
arahy.Tifrunner.gnm1.ann1.0H9GWB Arachis hypogaea HOM05D005629 ORTHO05D008000 1.8e-28 131.0 76 84.2
PRCOL_00005410 Prasinoderma coloniale HOM05D005629 ORTHO05D333266 3.0e-28 130.2 285 31.9
MELO3C032122.2 Cucumis melo HOM05D005629 ORTHO05D008000 7.4e-27 125.6 63 90.5
Zm00001eb048250 Zea mays HOM05D005629 ORTHO05D008000 1.1e-25 121.7 76 75.0
Lsat_1_v5_gn_0_46360 Lactuca sativa HOM05D005629 ORTHO05D008000 1.0e-23 115.2 123 54.5
AagrBONN_evm.TU.Sc2ySwM_228.873 Anthoceros agrestis HOM05D005629 ORTHO05D008000 1.3e-23 114.8 335 28.4
FAN02G2357 Fragaria x ananassa HOM05D005629 ORTHO05D008000 8.7e-20 102.1 102 52.0
A02p35090 Brassica napus HOM05D005629 ORTHO05D008000 1.5e-16 91.3 70 71.4
BraA02t08515Z Brassica rapa HOM05D005629 ORTHO05D008000 1.5e-16 91.3 70 71.4
CAN.G792.7 Capsicum annuum HOM05D002518 ORTHO05D002630 8.7e-12 75.5 42 88.1
FvH4_6g53460 Fragaria vesca HOM05D005629 ORTHO05D022663 1.8e-09 67.8 129 36.4
BolC2t11443H Brassica oleracea HOM05D005629 ORTHO05D008000 2.6e-08 63.9 50 70.0
FvH4_6g53450 Fragaria vesca HOM05D005629 ORTHO05D008000 2.2e-07 60.8 46 63.0
Zm00001eb059400 Zea mays HOM05D003056 ORTHO05D003422 2.2e-07 60.8 59 55.9
FvH4_6g53451 Fragaria vesca HOM05D005629 ORTHO05D196308 4.2e-06 56.6 74 44.6


User provided reference genes

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