Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005160g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 6.2e-126 454.5 298 100.0
Nitab4.5_0001961g0050 Nicotiana tabacum HOM05D006238 ORTHO05D007458 5.9e-84 315.1 338 73.4
Nn4g23380 Nelumbo nucifera HOM05D006238 ORTHO05D007458 2.6e-39 166.8 265 43.0
Peaxi162Scf00106g00109 Petunia axillaris HOM05D006238 ORTHO05D007458 4.7e-25 119.4 63 96.8
Nitab4.5_0004284g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 6.2e-25 119.0 74 82.4
PGSC0003DMG400005395 Solanum tuberosum HOM05D006238 ORTHO05D007458 2.3e-24 117.1 63 92.1
Solyc03g115410.3 Solanum lycopersicum HOM05D006238 ORTHO05D007458 8.9e-24 115.2 62 91.9
Phvul.009G193701 Phaseolus vulgaris HOM05D006238 ORTHO05D007458 1.5e-23 114.4 66 83.3
Sopen12g019730 Solanum pennellii HOM05D006238 ORTHO05D007458 2.6e-23 113.6 63 88.9
PGSC0003DMG401024548 Solanum tuberosum HOM05D006238 ORTHO05D007458 2.6e-23 113.6 62 90.3
CAN.G479.27 Capsicum annuum HOM05D006238 ORTHO05D007458 3.4e-23 113.2 63 88.9
Cpa.g.sc94.12 Carica papaya HOM05D006238 ORTHO05D007458 4.4e-23 112.8 75 72.0
Solyc12g040320.2 Solanum lycopersicum HOM05D006238 ORTHO05D007458 4.4e-23 112.8 63 87.3
Sopen03g034410 Solanum pennellii HOM05D006238 ORTHO05D007458 4.4e-23 112.8 62 90.3
Dinv38791 Davidia involucrata HOM05D006238 ORTHO05D007458 5.8e-23 112.5 62 87.1
MD06G1200000 Malus domestica HOM05D006238 ORTHO05D007458 5.8e-23 112.5 271 43.2
Medtr3g023830 Medicago truncatula HOM05D006238 ORTHO05D007458 5.8e-23 112.5 64 81.2
Glyma.04G164100 Glycine max HOM05D006238 ORTHO05D007458 7.5e-23 112.1 64 84.4
Cc04_g15060 Coffea canephora HOM05D006238 ORTHO05D007458 9.8e-23 111.7 62 85.5
Atru.chr9.382 Acer truncatum HOM05D006238 ORTHO05D007458 1.3e-22 111.3 62 85.5
Sed0022301 Sechium edule HOM05D006238 ORTHO05D007458 1.3e-22 111.3 63 84.1
Thecc.03G097700 Theobroma cacao HOM05D006238 ORTHO05D007458 1.3e-22 111.3 62 85.5
FAN13G1324 Fragaria x ananassa HOM05D000113 ORTHO05D002571 1.7e-22 110.9 61 86.9
Prupe.5G201600 Prunus persica HOM05D006238 ORTHO05D007458 1.7e-22 110.9 61 86.9
RcHm_v2.0_Chr7g0182671 Rosa chinensis HOM05D006238 ORTHO05D007458 1.7e-22 110.9 61 86.9
Ciclev10021749m.g Citrus clementina HOM05D006238 ORTHO05D007458 2.2e-22 110.5 61 85.2
Eucgr.K02503 Eucalyptus grandis HOM05D006238 ORTHO05D007458 2.2e-22 110.5 66 80.3
Aa31LG3G18600 Aethionema arabicum HOM05D006238 ORTHO05D007458 2.9e-22 110.2 73 76.7
FvH4_5g14250 Fragaria vesca HOM05D006238 ORTHO05D007458 2.9e-22 110.2 61 85.2
Glyma.06G201600 Glycine max HOM05D006238 ORTHO05D007458 2.9e-22 110.2 63 84.1
MD14G1209200 Malus domestica HOM05D006238 ORTHO05D007458 2.9e-22 110.2 61 86.9
Manes.06G087000 Manihot esculenta HOM05D006238 ORTHO05D007458 2.9e-22 110.2 62 83.9
Oeu038367.1 Olea europaea HOM05D006238 ORTHO05D007458 2.9e-22 110.2 62 85.5
Psat5g211960 Pisum sativum HOM05D006238 ORTHO05D007458 2.9e-22 110.2 63 82.5
QL10p018767 Quercus lobata HOM05D006238 ORTHO05D007458 2.9e-22 110.2 63 84.1
QL93p0191_0017 Quercus lobata HOM05D006238 ORTHO05D007458 2.9e-22 110.2 63 84.1
CANSAT80G2720 Cannabis sativa HOM05D006238 ORTHO05D007458 3.7e-22 109.8 62 82.3
CiPaw.11G050500 Carya illinoinensis HOM05D006238 ORTHO05D007458 3.7e-22 109.8 62 83.9
Ca_13804_v3 Cicer arietinum L. HOM05D006238 ORTHO05D007458 3.7e-22 109.8 63 82.5
QL05p088277 Quercus lobata HOM05D003602 ORTHO05D007458 3.7e-22 109.8 68 76.5
ECA232G0231 Erigeron canadensis HOM05D000954 ORTHO05D000822 4.9e-22 109.4 62 85.5
FAN08G1023 Fragaria x ananassa HOM05D000113 ORTHO05D002571 4.9e-22 109.4 61 85.2
Nitab4.5_0001410g0100 Nicotiana tabacum HOM05D006238 ORTHO05D007458 4.9e-22 109.4 71 80.3
TPR.G12219 Trifolium pratense HOM05D006238 ORTHO05D007458 4.9e-22 109.4 63 82.5
DCAR_016594 Daucus carota HOM05D006238 ORTHO05D007458 6.4e-22 109.0 62 83.9
Duzib205G0643 Durio zibethinus HOM05D006238 ORTHO05D007458 6.4e-22 109.0 62 82.3
Gohir.A09G243100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 6.4e-22 109.0 62 83.9
Gohir.D09G243800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 6.4e-22 109.0 62 83.9
Gorai.006G267600 Gossypium raimondii HOM05D006238 ORTHO05D007458 6.4e-22 109.0 62 83.9
SalBow5G1318 Salvia bowleyana HOM05D006238 ORTHO05D007458 6.4e-22 109.0 66 78.8
TWI81G0503 Tripterygium wilfordii HOM05D006238 ORTHO05D007458 6.4e-22 109.0 62 83.9
Cfa019307 Carpinus fangiana HOM05D006238 ORTHO05D007458 8.3e-22 108.6 62 82.3
Haze_07689 Corylus avellana HOM05D006238 ORTHO05D007458 8.3e-22 108.6 62 82.3
Migut.I00441 Erythranthe guttata HOM05D006238 ORTHO05D007458 8.3e-22 108.6 62 83.9
Lsat_1_v5_gn_4_110280 Lactuca sativa HOM05D006238 ORTHO05D007458 8.3e-22 108.6 62 85.5
Lj1g0017158 Lotus japonicus HOM05D006238 ORTHO05D007458 8.3e-22 108.6 62 82.3
Hund02602 Selenicereus undatus HOM05D006238 ORTHO05D007458 1.4e-21 107.8 74 68.9
Actinidia35026 Actinidia chinensis HOM05D006238 ORTHO05D007458 1.9e-21 107.5 62 82.3
Potri.015G048800 Populus trichocarpa HOM05D006238 ORTHO05D007458 1.9e-21 107.5 62 82.3
CSS0008812 Camellia sinensis var. sinensis HOM05D006238 ORTHO05D007458 2.4e-21 107.1 62 80.6
HanXRQChr14g0439161 Helianthus annuus HOM05D006238 ORTHO05D007458 2.4e-21 107.1 62 83.9
GSVIVG01007912001 Vitis vinifera HOM05D006238 ORTHO05D007458 2.4e-21 107.1 61 83.6
arahy.Tifrunner.gnm1.ann1.G7J9WL Arachis hypogaea HOM05D006238 ORTHO05D007458 3.2e-21 106.7 61 80.3
arahy.Tifrunner.gnm1.ann1.XMW6VU Arachis hypogaea HOM05D006238 ORTHO05D007458 3.2e-21 106.7 61 80.3
Migut.L00004 Erythranthe guttata HOM05D006238 ORTHO05D007458 3.2e-21 106.7 62 82.3
Aqoxy3G00445 Aquilegia oxysepala HOM05D006238 ORTHO05D007458 4.1e-21 106.3 61 82.0
MSTRG.22972 Avicennia marina HOM05D006238 ORTHO05D007458 4.1e-21 106.3 62 82.3
MELO3C017212.2 Cucumis melo HOM05D006238 ORTHO05D007458 4.1e-21 106.3 61 82.0
CsaV3_1G002770 Cucumis sativus L. HOM05D006238 ORTHO05D007458 4.1e-21 106.3 61 82.0
PGR044G1626 Punica granatum HOM05D006238 ORTHO05D007458 4.1e-21 106.3 61 82.0
ECA247G0665 Erigeron canadensis HOM05D000006 ORTHO05D007458 5.4e-21 105.9 61 83.6
Lalb_Chr08g0238951 Lupinus albus HOM05D006238 ORTHO05D007458 9.2e-21 105.1 61 80.3
HanXRQChr02g0042551 Helianthus annuus HOM05D006238 ORTHO05D007458 1.2e-20 104.8 62 80.6
Lsat_1_v5_gn_1_13640 Lactuca sativa HOM05D006238 ORTHO05D007458 1.2e-20 104.8 61 80.3
Gohir.A12G181100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 1.6e-20 104.4 62 77.4
Gohir.D12G183800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 1.6e-20 104.4 62 77.4
Gorai.008G197100 Gossypium raimondii HOM05D006238 ORTHO05D007458 1.6e-20 104.4 62 77.4
PSO478G4259 Papaver somniferum HOM05D006238 ORTHO05D007458 1.6e-20 104.4 62 79.0
THA.LOC104801299 Tarenaya hassleriana HOM05D006238 ORTHO05D007458 2.0e-20 104.0 61 82.0
PSO339G0502 Papaver somniferum HOM05D006238 ORTHO05D007458 3.5e-20 103.2 62 77.4
PSO384G2798 Papaver somniferum HOM05D006238 ORTHO05D007458 3.5e-20 103.2 62 77.4
PSO017G1619 Papaver somniferum HOM05D006238 ORTHO05D007458 4.6e-20 102.8 62 77.4
SGA_v2.0_scaffold28G11764 Striga asiatica HOM05D006238 ORTHO05D007458 4.6e-20 102.8 62 75.8
A03p03520 Brassica napus HOM05D006238 ORTHO05D007458 1.3e-19 101.3 60 80.0
BraA03t09702Z Brassica rapa HOM05D006238 ORTHO05D007458 1.3e-19 101.3 60 80.0
ClCG06G015770 Citrullus lanatus HOM05D006238 ORTHO05D007458 1.3e-19 101.3 61 78.7
Thhalv10014418m.g Eutrema salsugineum HOM05D006238 ORTHO05D007458 1.3e-19 101.3 60 80.0
ATR0064G078 Amborella trichopoda HOM05D006238 ORTHO05D007458 2.3e-19 100.5 61 77.0
BcaB05g21597 Brassica carinata HOM05D006238 ORTHO05D007458 3.0e-19 100.1 60 78.3
BcaNung04721 Brassica carinata HOM05D006238 ORTHO05D007458 3.0e-19 100.1 60 78.3
C02p03310 Brassica napus HOM05D006238 ORTHO05D007458 3.0e-19 100.1 60 78.3
BolC2t06295H Brassica oleracea HOM05D006238 ORTHO05D007458 3.0e-19 100.1 60 78.3
BraA02t04934Z Brassica rapa HOM05D006238 ORTHO05D007458 3.0e-19 100.1 60 78.3
Sp6g35050 Schrenkiella parvula HOM05D006238 ORTHO05D007458 3.0e-19 100.1 60 78.3
BcaB01g05644 Brassica carinata HOM05D006238 ORTHO05D007458 5.0e-19 99.4 60 78.3
BcaB01g05687 Brassica carinata HOM05D006238 ORTHO05D007458 5.0e-19 99.4 60 76.7
C03p03970 Brassica napus HOM05D006238 ORTHO05D007458 5.0e-19 99.4 60 78.3
BolC3t12934H Brassica oleracea HOM05D006238 ORTHO05D007458 5.0e-19 99.4 60 78.3
EL10Ac5g11104 Beta vulgaris HOM05D006238 ORTHO05D007458 6.6e-19 99.0 62 71.0
BcaB01g05688 Brassica carinata HOM05D006238 ORTHO05D007458 8.6e-19 98.6 60 76.7
COL.COLO4_22216 Corchorus olitorius HOM05D006238 ORTHO05D007458 4.3e-18 96.3 62 77.4
AL6G18240 Arabidopsis lyrata HOM05D006238 ORTHO05D007458 5.6e-18 95.9 60 76.7
BcaNung04724 Brassica carinata HOM05D006238 ORTHO05D007458 5.6e-18 95.9 60 76.7
Carub.0006s0680 Capsella rubella HOM05D006238 ORTHO05D007458 5.6e-18 95.9 60 76.7
HPP92_027112 Vanilla planifolia HOM05D006238 ORTHO05D007458 9.5e-18 95.1 65 67.7
CARHR205290 Cardamine hirsuta HOM05D006238 ORTHO05D007458 2.8e-17 93.6 60 75.0
HPP92_013436 Vanilla planifolia HOM05D001674 ORTHO05D008374 4.7e-17 92.8 62 69.4
AT5G07910 Arabidopsis thaliana HOM05D006238 ORTHO05D007458 6.2e-17 92.4 60 73.3
AagrBONN_evm.TU.Sc2ySwM_228.2402 Anthoceros agrestis HOM05D006238 ORTHO05D007458 3.1e-16 90.1 64 62.5
Hund26925 Selenicereus undatus HOM05D006238 ORTHO05D007458 1.5e-15 87.8 65 64.6
Zm00001eb008470 Zea mays HOM05D006238 ORTHO05D007458 2.4e-13 80.5 55 69.1
Pp3c19_5770 Physcomitrium patens HOM05D006238 ORTHO05D007458 3.5e-12 76.6 61 57.4
SMO364G0258 Selaginella moellendorffii HOM05D006238 ORTHO05D007458 1.3e-11 74.7 60 51.7
Dinv10691 Davidia involucrata HOM05D000773 ORTHO05D000588 1.1e-10 71.6 41 78.0
CBR_g18689 Chara braunii HOM05D006238 ORTHO05D007458 4.3e-10 69.7 59 50.8
Cre12.g503600 Chlamydomonas reinhardtii HOM05D006238 ORTHO05D007458 2.8e-09 67.0 63 49.2
Rhsim12G0152200 Rhododendron simsii HOM05D006238 ORTHO05D007458 3.6e-09 66.6 38 81.6
vmacro16511 Vaccinium macrocarpon HOM05D006238 ORTHO05D007458 3.6e-09 66.6 38 81.6
Mapoly0043s0125 Marchantia polymorpha HOM05D006395 ORTHO05D007894 1.4e-08 64.7 67 41.8
AagrBONN_evm.TU.Sc2ySwM_228.749 Anthoceros agrestis HOM05D006395 ORTHO05D007894 8.9e-08 62.0 60 46.7
SMO198G0061 Selaginella moellendorffii HOM05D006395 ORTHO05D007894 1.2e-07 61.6 65 41.5
PRCOL_00001761 Prasinoderma coloniale HOM05D006238 ORTHO05D007458 9.9e-07 58.5 277 22.7
CBR_g52452 Chara braunii HOM05D006395 ORTHO05D007458 1.3e-06 58.2 129 27.9
Peaxi162Scf00201g00133 Petunia axillaris HOM05D006238 ORTHO05D007458 1.3e-06 58.2 33 84.8
QL93p0869_0056 Quercus lobata HOM05D000176 ORTHO05D000106 2.2e-06 57.4 31 87.1
QL09p008289 Quercus lobata HOM05D001043 ORTHO05D000106 4.9e-06 56.2 31 87.1


User provided reference genes

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