Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 0.0e+00 1191.0 691 100.0
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 0.0e+00 1112.1 691 91.2
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 8.9e-277 956.8 697 82.8
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 3.3e-271 938.3 698 79.1
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 5.2e-269 931.0 694 79.4
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 9.8e-268 926.8 698 77.5
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 1.3e-267 926.4 698 76.5
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 2.1e-201 706.4 606 63.5
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 7.0e-197 691.4 582 65.3
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 9.1e-197 691.0 600 67.0
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 1.3e-195 687.2 608 67.8
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 1.9e-194 683.3 594 61.4
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 7.2e-194 681.4 595 64.4
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 7.2e-194 681.4 606 69.0
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 8.0e-193 677.9 676 60.5
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 1.0e-192 677.6 599 64.3
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 8.8e-192 674.5 697 58.5
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 1.5e-191 673.7 597 66.5
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 1.3e-190 670.6 589 67.1
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 1.7e-190 670.2 594 61.4
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 3.7e-190 669.1 631 62.8
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 3.7e-190 669.1 597 60.0
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 1.1e-189 667.5 589 63.3
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 1.4e-189 667.2 681 59.2
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.8e-189 666.8 589 64.3
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 1.8e-189 666.8 597 64.3
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 5.3e-189 665.2 597 64.0
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 4.5e-188 662.1 666 63.7
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 5.9e-188 661.8 599 65.8
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.0e-187 661.0 599 65.9
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 1.3e-187 660.6 669 58.7
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 2.2e-187 659.8 599 59.4
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 2.2e-187 659.8 566 66.3
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 5.0e-187 658.7 597 68.5
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 1.1e-186 657.5 594 64.0
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 1.1e-186 657.5 593 63.1
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 7.2e-186 654.8 675 63.4
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 9.4e-186 654.4 599 59.4
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 9.4e-186 654.4 701 58.3
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 3.6e-185 652.5 607 61.4
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 3.0e-184 649.4 599 57.6
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 5.2e-184 648.7 603 62.2
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 6.8e-184 648.3 602 60.3
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 6.8e-184 648.3 602 59.0
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 1.5e-183 647.1 617 59.0
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 3.4e-183 646.0 599 59.6
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 5.7e-183 645.2 625 61.6
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 9.8e-183 644.4 585 60.0
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 3.1e-181 639.4 582 60.8
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 2.7e-180 636.3 579 60.6
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 4.5e-180 635.6 606 61.1
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 5.9e-180 635.2 590 57.8
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 5.9e-180 635.2 599 58.9
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 5.9e-180 635.2 608 62.5
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 1.7e-179 633.6 646 58.4
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 3.8e-179 632.5 547 65.6
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 3.8e-179 632.5 650 56.3
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 5.0e-179 632.1 599 64.4
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 1.5e-178 630.6 603 62.2
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 3.3e-178 629.4 587 61.0
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 9.5e-178 627.9 591 57.0
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 1.2e-177 627.5 590 59.3
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 2.1e-177 626.7 594 62.5
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 3.6e-177 625.9 598 58.9
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 1.0e-176 624.4 592 62.2
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 1.4e-176 624.0 598 60.5
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 2.3e-176 623.2 637 57.3
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 4.0e-176 622.5 603 65.3
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 2.0e-175 620.2 554 67.3
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 4.4e-175 619.0 597 62.0
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 9.8e-175 617.8 597 62.1
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 3.7e-174 615.9 604 60.3
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 8.3e-174 614.8 591 58.9
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 5.4e-173 612.1 587 61.8
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 2.0e-172 610.1 598 58.2
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 2.0e-172 610.1 598 59.4
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 2.3e-171 606.7 590 62.4
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 2.3e-171 606.7 616 59.1
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 2.9e-171 606.3 462 73.2
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 2.8e-169 599.7 601 58.1
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 2.6e-167 593.2 626 55.1
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 4.4e-167 592.4 649 53.3
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 5.8e-167 592.0 611 58.4
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 4.1e-165 585.9 468 62.6
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 2.7e-164 583.2 585 59.8
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 3.5e-164 582.8 635 56.9
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 4.6e-164 582.4 554 59.4
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 4.3e-162 575.9 441 71.0
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 9.5e-162 574.7 532 60.0
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 1.6e-161 573.9 585 59.0
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 1.9e-157 560.5 591 57.9
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 2.5e-154 550.1 551 59.2
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 2.9e-150 536.6 565 57.3
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 1.5e-146 524.2 569 54.7
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 4.6e-140 502.7 602 54.2
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 9.6e-138 495.0 553 53.3
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 4.4e-135 486.1 591 49.4
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 5.3e-112 409.5 613 48.9
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 2.0e-95 354.4 286 61.2
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 8.3e-73 279.3 638 35.9
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 8.3e-73 279.3 638 35.9
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 4.0e-67 260.4 460 41.7
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 5.6e-53 213.4 426 35.4
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 3.2e-24 117.9 189 40.7
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 1.6e-23 115.5 135 46.7
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 5.8e-18 97.1 149 44.3
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 2.7e-15 88.2 194 30.9
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 1.1e-13 82.8 76 56.6
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 3.1e-11 74.7 130 35.4
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 1.5e-10 72.4 82 43.9
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 2.6e-10 71.6 105 33.3
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 9.9e-10 69.7 99 49.5
Cre10.g459350 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 2.2e-09 68.6 206 29.1
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 1.1e-08 66.2 50 52.0
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 7.9e-07 60.1 81 34.6
Cre13.g588201 Chlamydomonas reinhardtii HOM05D063782 ORTHO05D044138 3.9e-06 57.8 45 53.3


User provided reference genes

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