Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 4.3e-193 678.3 485 100.0
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 7.1e-180 634.4 471 96.8
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 4.2e-156 555.4 458 90.2
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 4.3e-153 545.4 458 89.3
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 5.7e-153 545.0 456 90.1
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 1.3e-146 523.9 464 86.6
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 2.3e-146 523.1 454 88.5
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 2.1e-123 446.8 435 81.4
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 8.2e-120 434.9 437 79.2
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 5.0e-117 425.6 409 83.9
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 1.7e-112 410.6 434 78.1
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 3.7e-112 409.5 431 77.0
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 8.3e-112 408.3 431 77.3
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 8.3e-112 408.3 431 77.3
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 4.5e-110 402.5 407 82.3
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 4.5e-110 402.5 407 82.6
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 1.0e-106 391.3 433 76.4
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 1.2e-105 387.9 437 72.8
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 1.3e-104 384.4 438 73.7
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 2.4e-103 380.2 406 78.8
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 1.3e-101 374.4 443 73.6
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 1.1e-100 371.3 440 73.2
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 4.3e-100 369.4 440 72.3
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 7.3e-100 368.6 438 73.3
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 2.2e-96 357.1 441 71.0
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 2.7e-94 350.1 435 70.6
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 3.5e-94 349.7 445 69.4
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 3.5e-94 349.7 445 69.0
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 1.0e-93 348.2 440 70.0
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 1.1e-92 344.7 438 70.8
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 2.5e-92 343.6 438 70.1
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 1.2e-91 341.3 450 70.4
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 1.6e-91 340.9 440 70.0
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 3.6e-91 339.7 437 69.8
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 3.6e-91 339.7 449 67.9
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 4.7e-91 339.3 431 69.8
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 6.2e-91 339.0 444 68.9
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 8.0e-91 338.6 456 67.8
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 4.0e-90 336.3 456 67.3
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 8.9e-90 335.1 462 67.3
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 1.5e-89 334.3 439 67.7
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 2.0e-89 334.0 437 68.9
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 9.8e-89 331.6 444 70.0
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 9.8e-89 331.6 430 68.6
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 6.4e-88 328.9 450 68.0
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 6.4e-88 328.9 441 69.2
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 1.1e-87 328.2 437 66.8
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 3.2e-87 326.6 451 67.8
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 3.2e-87 326.6 437 67.0
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 5.4e-87 325.9 444 69.6
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.7e-85 320.9 460 65.7
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 2.3e-85 320.5 451 65.4
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 5.0e-85 319.3 408 72.5
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 1.1e-84 318.2 432 69.9
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 2.5e-84 317.0 439 67.9
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 5.6e-84 315.8 444 65.5
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 6.2e-83 312.4 452 65.9
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 1.1e-82 311.6 444 65.8
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 1.8e-82 310.8 408 71.6
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 2.3e-82 310.5 438 66.9
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 4.0e-82 309.7 440 66.6
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 8.9e-82 308.5 469 65.2
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 2.6e-81 307.0 409 61.1
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 3.4e-81 306.6 407 71.7
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 4.4e-81 306.2 438 66.7
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 7.5e-81 305.4 442 67.4
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 1.7e-80 304.3 438 66.7
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 2.2e-80 303.9 438 66.0
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 1.4e-79 301.2 191 77.0
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 1.9e-79 300.8 438 65.8
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 1.9e-79 300.8 438 65.8
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 2.4e-79 300.4 406 71.2
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 5.4e-79 299.3 525 48.4
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 7.1e-79 298.9 439 66.1
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 4.6e-78 296.2 410 69.5
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 4.6e-78 296.2 445 64.7
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 1.0e-77 295.0 403 68.7
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 3.9e-77 293.1 445 64.5
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 3.9e-77 293.1 431 64.0
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 1.2e-75 288.1 398 70.4
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 2.4e-74 283.9 442 63.8
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 1.2e-73 281.6 442 64.3
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 1.5e-73 281.2 442 64.7
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 3.4e-73 280.0 400 67.2
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 3.0e-69 266.9 416 45.7
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 8.7e-69 265.4 436 64.0
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 4.9e-64 249.6 444 45.5
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 1.6e-59 234.6 226 55.3
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 2.0e-57 227.6 222 53.6
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 2.3e-53 214.2 375 67.5
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 6.7e-45 186.0 134 65.7
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 1.3e-43 181.8 407 59.5
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 3.4e-41 173.7 276 79.7
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 9.7e-36 155.6 95 74.7
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 8.2e-35 152.5 99 69.7
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 8.2e-35 152.5 131 58.0
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 1.2e-33 148.7 95 70.5
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 2.5e-31 141.0 95 69.5
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 1.4e-29 135.2 104 62.5
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 3.3e-28 130.6 99 60.6
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 1.1e-26 125.6 71 81.7
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.7e-24 118.2 69 76.8
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 5.5e-23 113.2 66 77.3
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 2.0e-20 104.8 144 41.7
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 1.2e-17 95.5 66 62.1
SMO364G0905 Selaginella moellendorffii HOM05D031156 ORTHO05D000355 3.2e-07 60.8 214 25.7
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 1.6e-06 58.5 148 28.4
ECA234G2429 Erigeron canadensis HOM05D004271 ORTHO05D006011 2.1e-06 58.2 175 26.3
Nn7g37484 Nelumbo nucifera HOM05D007202 ORTHO05D009125 2.7e-06 57.8 163 28.2
Lalb_Chr02g0143591 Lupinus albus HOM05D007202 ORTHO05D009125 6.1e-06 56.6 163 28.8
Mapoly0026s0011 Marchantia polymorpha HOM05D006999 ORTHO05D008936 8.0e-06 56.2 118 28.8


User provided reference genes

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