Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 8.1e-183 643.7 335 100.0
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 3.0e-145 518.8 288 91.7
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.9e-145 518.5 298 89.6
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.9e-145 518.5 298 89.6
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 1.4e-142 510.0 297 88.2
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 1.5e-141 506.5 297 87.5
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.2e-138 496.9 265 97.4
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 1.0e-121 440.7 287 77.0
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 2.6e-117 426.0 285 74.4
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 3.5e-117 425.6 292 72.6
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 4.5e-117 425.2 285 73.7
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 1.5e-115 420.2 289 71.6
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 1.6e-114 416.8 289 70.6
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 3.6e-114 415.6 238 86.1
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 3.3e-112 409.1 296 69.6
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 4.4e-112 408.7 289 69.9
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 4.8e-111 405.2 287 67.6
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 1.6e-109 400.2 285 70.9
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 2.0e-109 399.8 285 69.8
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 1.0e-108 397.5 287 67.9
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 2.2e-108 396.4 292 67.8
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 2.9e-108 396.0 285 67.7
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 5.0e-108 395.2 291 68.4
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 3.2e-107 392.5 285 69.5
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 3.2e-107 392.5 297 66.3
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 5.5e-107 391.7 289 67.5
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.2e-106 390.6 288 67.4
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.2e-106 390.6 285 68.4
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 2.1e-106 389.8 287 66.9
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.1e-106 389.8 289 66.4
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 2.7e-106 389.4 287 69.0
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 1.4e-105 387.1 286 67.1
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.4e-105 387.1 290 66.9
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 1.8e-105 386.7 299 65.2
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.8e-105 386.7 299 65.2
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.3e-105 386.3 299 65.2
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 3.0e-105 386.0 285 66.3
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 5.2e-105 385.2 289 68.5
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 8.8e-105 384.4 292 64.7
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 8.8e-105 384.4 299 65.2
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.5e-104 383.6 299 64.9
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 2.0e-104 383.3 287 66.6
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 5.7e-104 381.7 288 65.3
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 7.5e-104 381.3 285 66.3
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 9.8e-104 380.9 299 64.9
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 9.8e-104 380.9 299 64.9
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.7e-103 380.2 291 64.6
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 1.7e-103 380.2 283 67.1
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 3.7e-103 379.0 296 63.9
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 4.8e-103 378.6 291 64.6
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 6.3e-103 378.3 290 65.9
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 8.3e-103 377.9 291 64.3
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 7.0e-102 374.8 285 64.2
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 7.0e-102 374.8 285 64.2
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 7.0e-102 374.8 286 65.7
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 9.1e-102 374.4 286 66.1
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 7.7e-101 371.3 296 63.9
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 2.3e-100 369.8 287 64.5
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 2.9e-100 369.4 290 65.9
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 5.0e-100 368.6 293 62.8
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 8.6e-100 367.9 293 61.4
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.1e-99 367.5 284 63.0
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 2.5e-99 366.3 284 63.0
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 3.2e-99 365.9 289 61.9
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 3.2e-99 365.9 298 61.1
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 7.2e-99 364.8 284 62.0
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 2.8e-98 362.8 292 64.4
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 6.1e-98 361.7 289 60.6
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 1.8e-97 360.1 289 61.2
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 3.0e-97 359.4 283 61.8
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 3.0e-97 359.4 284 62.3
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 3.4e-96 355.9 285 62.1
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 7.5e-96 354.8 285 62.5
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 7.5e-96 354.8 289 63.3
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 1.7e-95 353.6 291 59.1
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 1.7e-95 353.6 289 59.5
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 2.8e-95 352.8 296 61.5
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 4.9e-95 352.1 289 58.8
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 1.4e-94 350.5 264 65.9
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.8e-94 350.1 270 63.0
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 5.4e-94 348.6 270 63.3
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 5.4e-94 348.6 285 60.0
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 1.2e-93 347.4 282 61.3
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 2.0e-93 346.7 302 61.6
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 2.7e-93 346.3 284 60.9
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 3.5e-93 345.9 234 72.6
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 9.5e-91 337.8 295 60.7
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 6.1e-90 335.1 285 59.3
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 1.9e-83 313.5 282 61.7
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 2.0e-72 276.9 293 52.2
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.4e-70 270.8 290 51.7
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 3.9e-68 262.7 293 49.5
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 5.1e-68 262.3 284 50.0
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 3.3e-67 259.6 290 50.7
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 1.2e-66 257.7 290 49.7
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.4e-62 244.2 172 69.2
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 2.5e-59 233.4 180 63.9
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 6.2e-58 228.8 168 70.2
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 6.9e-57 225.3 287 46.0
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 1.5e-56 224.2 286 43.7
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 1.0e-52 211.5 154 63.6
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 6.4e-47 192.2 127 74.0
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 9.3e-46 188.3 162 58.6
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 2.5e-35 153.7 229 40.6
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 4.8e-26 122.9 85 69.4
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 4.1e-25 119.8 85 68.2
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 6.7e-20 102.4 80 61.2
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 1.3e-18 98.2 303 25.7
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.2e-16 91.7 54 79.6
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 6.5e-15 85.9 264 31.4
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 4.2e-14 83.2 87 47.1
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.2e-10 70.9 88 51.1


User provided reference genes

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