Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004804g0050 Nicotiana tabacum HOM05D004762 ORTHO05D005972 3.3e-43 177.9 89 100.0
Nitab4.5_0001180g0090 Nicotiana tabacum HOM05D004762 ORTHO05D005972 2.1e-21 105.5 65 83.1
Nitab4.5_0000797g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 1.0e-20 103.2 56 92.9
Nitab4.5_0006049g0030 Nicotiana tabacum HOM05D004762 ORTHO05D005972 4.0e-20 101.3 56 91.1
Nitab4.5_0013304g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 4.0e-20 101.3 56 91.1
Peaxi162Scf00284g00722 Petunia axillaris HOM05D004762 ORTHO05D005972 2.2e-18 95.5 56 83.9
CAN.G1087.1 Capsicum annuum HOM05D004762 ORTHO05D005972 5.4e-17 90.9 56 83.9
CAN.G1305.22 Capsicum annuum HOM05D004762 ORTHO05D005972 5.4e-17 90.9 56 83.9
Solyc10g076800.2 Solanum lycopersicum HOM05D004762 ORTHO05D005972 1.2e-16 89.7 56 82.1
PGSC0003DMG400019183 Solanum tuberosum HOM05D004762 ORTHO05D005972 1.2e-16 89.7 56 82.1
Cfa001301 Carpinus fangiana HOM05D004762 ORTHO05D005972 1.9e-14 82.4 56 67.9
CiPaw.01G300200 Carya illinoinensis HOM05D004762 ORTHO05D005972 1.6e-13 79.3 56 62.5
Ciclev10031450m.g Citrus clementina HOM05D004762 ORTHO05D005972 1.6e-13 79.3 55 67.3
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 1.6e-13 79.3 53 67.9
Rhsim03G0145100 Rhododendron simsii HOM05D004762 ORTHO05D005972 2.8e-13 78.6 60 60.0
Hund15913 Selenicereus undatus HOM05D004762 ORTHO05D005972 2.8e-13 78.6 48 77.1
AUR62022908 Chenopodium quinoa HOM05D004762 ORTHO05D005972 3.6e-13 78.2 50 72.0
vmacro06958 Vaccinium macrocarpon HOM05D004762 ORTHO05D005972 3.6e-13 78.2 60 60.0
AUR62012271 Chenopodium quinoa HOM05D004762 ORTHO05D005972 4.7e-13 77.8 50 74.0
TWI53G2041 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 4.7e-13 77.8 55 67.3
EL10Ac2g04854 Beta vulgaris HOM05D004762 ORTHO05D005972 6.1e-13 77.4 50 74.0
Thecc.10G014000 Theobroma cacao HOM05D004762 ORTHO05D005972 6.1e-13 77.4 51 68.6
TAR636G3670 Trochodendron aralioides HOM05D004762 ORTHO05D005972 6.1e-13 77.4 56 64.3
COL.COLO4_23625 Corchorus olitorius HOM05D004762 ORTHO05D005972 8.0e-13 77.0 51 70.6
Gorai.013G017200 Gossypium raimondii HOM05D004762 ORTHO05D005972 1.8e-12 75.9 55 60.0
MD07G1223900 Malus domestica HOM05D004762 ORTHO05D005972 1.8e-12 75.9 49 73.5
Carub.0004s2241 Capsella rubella HOM05D004762 ORTHO05D005972 2.3e-12 75.5 56 64.3
Manes.07G131500 Manihot esculenta HOM05D004762 ORTHO05D005972 3.0e-12 75.1 56 66.1
Gohir.D13G015700 Gossypium hirsutum HOM05D004762 ORTHO05D005972 4.0e-12 74.7 55 60.0
SalBow6G6782 Salvia bowleyana HOM05D004762 ORTHO05D005972 4.0e-12 74.7 54 64.8
Sed0015827 Sechium edule HOM05D004762 ORTHO05D005972 4.0e-12 74.7 53 62.3
Sc10g0002460 Simmondsia chinensis HOM05D004762 ORTHO05D005972 4.0e-12 74.7 49 71.4
Gohir.D06G056233 Gossypium hirsutum HOM05D004762 ORTHO05D005972 5.2e-12 74.3 55 60.0
Lalb_Chr04g0254441 Lupinus albus HOM05D004762 ORTHO05D005972 5.2e-12 74.3 56 64.3
Aa31LG5G19380 Aethionema arabicum HOM05D004762 ORTHO05D005972 6.8e-12 73.9 56 62.5
CANSAT56G2662 Cannabis sativa HOM05D004762 ORTHO05D005972 6.8e-12 73.9 49 75.5
Migut.F00664 Erythranthe guttata HOM05D004762 ORTHO05D005972 6.8e-12 73.9 60 58.3
arahy.Tifrunner.gnm1.ann1.YY9F0M Arachis hypogaea HOM05D004762 ORTHO05D005972 1.2e-11 73.2 56 60.7
CSS0039953 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 1.2e-11 73.2 60 56.7
CSS0044129 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 1.2e-11 73.2 60 56.7
Potri.012G095500 Populus trichocarpa HOM05D004762 ORTHO05D005972 1.2e-11 73.2 53 64.2
TWI09G1175 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 1.5e-11 72.8 53 64.2
GSVIVG01032791001 Vitis vinifera HOM05D004762 ORTHO05D005972 1.5e-11 72.8 49 69.4
FvH4_7g24680 Fragaria vesca HOM05D004762 ORTHO05D005972 2.0e-11 72.4 49 71.4
FAN06G2944 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.0e-11 72.4 49 71.4
FAN10G2322 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.0e-11 72.4 49 71.4
Gorai.004G138800 Gossypium raimondii HOM05D004762 ORTHO05D005972 2.0e-11 72.4 55 56.4
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 2.6e-11 72.0 54 64.8
Phvul.010G113600 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 2.6e-11 72.0 51 64.7
Gohir.D08G135600 Gossypium hirsutum HOM05D004762 ORTHO05D005972 3.4e-11 71.6 55 56.4
Hma1.2p1_0523F.1_g172170 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 3.4e-11 71.6 55 60.0
ClCG07G004360 Citrullus lanatus HOM05D004762 ORTHO05D005972 4.4e-11 71.2 54 57.4
Eucgr.G03076 Eucalyptus grandis HOM05D004762 ORTHO05D005972 4.4e-11 71.2 53 58.5
Lj8A64T49 Lonicera japonica HOM05D004762 ORTHO05D005972 4.4e-11 71.2 47 76.6
Glyma.07G056300 Glycine max HOM05D004762 ORTHO05D005972 5.7e-11 70.9 51 62.7
Gohir.A13G014500 Gossypium hirsutum HOM05D004762 ORTHO05D005972 5.7e-11 70.9 53 60.4
Prupe.2G252400 Prunus persica HOM05D004762 ORTHO05D005972 5.7e-11 70.9 49 69.4
FAN01G2296 Fragaria x ananassa HOM05D004762 ORTHO05D005972 7.5e-11 70.5 49 69.4
A04p29970 Brassica napus HOM05D004762 ORTHO05D001193 9.8e-11 70.1 55 58.2
Hma1.2p1_0145F.1_g065350 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 9.8e-11 70.1 55 60.0
QL06p052059 Quercus lobata HOM05D004762 ORTHO05D005972 9.8e-11 70.1 54 59.3
Cc08_g07190 Coffea canephora HOM05D004762 ORTHO05D005972 1.3e-10 69.7 60 56.7
Hma1.2p1_2705F.1_g327160 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 1.3e-10 69.7 55 60.0
Sabra15G0114600 Salix brachista HOM05D004762 ORTHO05D005972 1.3e-10 69.7 53 60.4
Atru.BG.273.p Acer truncatum HOM05D004762 ORTHO05D005972 1.7e-10 69.3 53 60.4
RcHm_v2.0_Chr1g0370541 Rosa chinensis HOM05D004762 ORTHO05D005972 1.7e-10 69.3 49 65.3
SGA_v2.0_scaffold60G20982 Striga asiatica HOM05D004762 ORTHO05D005972 1.7e-10 69.3 49 69.4
AT2G40190 Arabidopsis thaliana HOM05D004762 ORTHO05D005972 2.2e-10 68.9 56 60.7
BraA04t18511Z Brassica rapa HOM05D004762 ORTHO05D001193 2.2e-10 68.9 55 56.4
Duzib106G1587 Durio zibethinus HOM05D004762 ORTHO05D005972 2.2e-10 68.9 51 56.9
A05p06240 Brassica napus HOM05D004762 ORTHO05D005972 2.8e-10 68.6 56 60.7
VMungo0331G1989 Vigna mungo HOM05D004762 ORTHO05D005972 2.8e-10 68.6 51 62.7
arahy.Tifrunner.gnm1.ann1.BGVI4S Arachis hypogaea HOM05D004762 ORTHO05D005972 3.7e-10 68.2 49 69.4
arahy.Tifrunner.gnm1.ann1.NBD53L Arachis hypogaea HOM05D004762 ORTHO05D005972 3.7e-10 68.2 49 69.4
BcaB02g09041 Brassica carinata HOM05D004762 ORTHO05D005972 3.7e-10 68.2 56 58.9
CDE02G4330 Ceratophyllum demersum HOM05D004762 ORTHO05D005972 3.7e-10 68.2 53 62.3
CsaV3_5G010300 Cucumis sativus L. HOM05D004762 ORTHO05D005972 3.7e-10 68.2 48 62.5
DCAR_024818 Daucus carota HOM05D004762 ORTHO05D005972 3.7e-10 68.2 51 60.8
ECA238G4598 Erigeron canadensis HOM05D001399 ORTHO05D001670 3.7e-10 68.2 49 65.3
MD01G1154800 Malus domestica HOM05D004762 ORTHO05D005972 3.7e-10 68.2 49 65.3
TPR.G15355 Trifolium pratense HOM05D004762 ORTHO05D005972 3.7e-10 68.2 49 71.4
BraA05t19588Z Brassica rapa HOM05D004762 ORTHO05D005972 4.9e-10 67.8 56 58.9
PGR142G3177 Punica granatum HOM05D004762 ORTHO05D005972 6.3e-10 67.4 51 60.8
Lj3g0010190 Lotus japonicus HOM05D004762 ORTHO05D005972 8.3e-10 67.0 49 65.3
BcaB06g29139 Brassica carinata HOM05D004762 ORTHO05D005972 1.1e-09 66.6 55 54.5
BcaC02g12138 Brassica carinata HOM05D004762 ORTHO05D005972 1.1e-09 66.6 56 58.9
C04p07190 Brassica napus HOM05D004762 ORTHO05D005972 1.1e-09 66.6 56 58.9
BolC4t22343H Brassica oleracea HOM05D004762 ORTHO05D005972 1.1e-09 66.6 56 58.9
Thhalv10016619m.g Eutrema salsugineum HOM05D004762 ORTHO05D005972 1.1e-09 66.6 50 62.0
Lsat_1_v5_gn_2_124101 Lactuca sativa HOM05D004762 ORTHO05D005972 1.4e-09 66.2 49 63.3
Medtr8g027750 Medicago truncatula HOM05D004762 ORTHO05D005972 1.4e-09 66.2 49 69.4
Oeu043882.1 Olea europaea HOM05D004762 ORTHO05D005972 1.4e-09 66.2 49 65.3
Sp4g22540 Schrenkiella parvula HOM05D004762 ORTHO05D005972 1.4e-09 66.2 55 54.5
SEGI_20752 Sequoiadendron giganteum HOM05D004762 ORTHO05D005972 1.4e-09 66.2 52 57.7
AL108U10020 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 1.8e-09 65.9 56 57.1
AL4G37920 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 1.8e-09 65.9 56 57.1
HanXRQChr14g0459541 Helianthus annuus HOM05D004762 ORTHO05D005972 1.8e-09 65.9 46 65.2
PSO017G1441 Papaver somniferum HOM05D004762 ORTHO05D005972 1.8e-09 65.9 55 52.7
Nn1g09364 Nelumbo nucifera HOM05D004762 ORTHO05D005972 2.4e-09 65.5 51 58.8
Psat4g160680 Pisum sativum HOM05D004762 ORTHO05D005972 2.4e-09 65.5 49 67.3
Aqoxy7G00585 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 3.1e-09 65.1 53 58.5
Potri.015G093000 Populus trichocarpa HOM05D004762 ORTHO05D005972 3.1e-09 65.1 51 58.8
Ca_23540_v3 Cicer arietinum L. HOM05D004762 ORTHO05D005972 4.1e-09 64.7 49 67.3
Glyma.16G025200 Glycine max HOM05D004762 ORTHO05D005972 5.4e-09 64.3 49 61.2
Oeu011273.2 Olea europaea HOM05D004762 ORTHO05D005972 5.4e-09 64.3 56 55.4
Aqoxy4G02489 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 7.0e-09 63.9 54 55.6
Os12g0583000 Oryza sativa ssp. japonica HOM05D004762 ORTHO05D005972 7.0e-09 63.9 53 60.4
HPP92_020134 Vanilla planifolia HOM05D004762 ORTHO05D005972 1.2e-08 63.2 53 60.4
PSO675G7276 Papaver somniferum HOM05D004762 ORTHO05D005972 3.5e-08 61.6 53 52.8
EL10Ac2g03328 Beta vulgaris HOM05D004762 ORTHO05D005972 4.5e-08 61.2 41 68.3
CBR_g12682 Chara braunii HOM05D004762 ORTHO05D005972 4.5e-08 61.2 49 63.3
PSO478G3676 Papaver somniferum HOM05D004762 ORTHO05D005972 4.5e-08 61.2 53 50.9
unitig_748.g8448 Utricularia gibba HOM05D004762 ORTHO05D005972 5.9e-08 60.8 49 57.1
Zm00001eb030250 Zea mays HOM05D004762 ORTHO05D005972 1.0e-07 60.1 53 54.7
PSO017G5956 Papaver somniferum HOM05D004762 ORTHO05D005972 1.3e-07 59.7 53 50.9
ATR0580G181 Amborella trichopoda HOM05D004762 ORTHO05D005972 2.9e-07 58.5 47 61.7
Cre01.g058521 Chlamydomonas reinhardtii HOM05D004762 ORTHO05D005972 1.9e-06 55.8 53 49.1
AagrBONN_evm.TU.Sc2ySwM_228.3247 Anthoceros agrestis HOM05D004762 ORTHO05D005972 2.5e-06 55.5 53 47.2
BcaB01g03555 Brassica carinata HOM05D004762 ORTHO05D005972 3.3e-06 55.1 43 60.5


User provided reference genes

Program Settings