Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004697g0040 Nicotiana tabacum HOM05D002578 ORTHO05D002698 9.8e-43 176.4 90 100.0
Solyc00g500034.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 1.4e-36 156.0 86 94.2
Peaxi162Scf00299g00118 Petunia axillaris HOM05D002578 ORTHO05D005154 4.0e-36 154.5 86 94.2
CAN.G114.8 Capsicum annuum HOM05D002578 ORTHO05D002698 4.4e-35 151.0 86 90.7
Hma1.2p1_0192F.1_g083740 Hydrangea macrophylla HOM05D002578 ORTHO05D002698 2.9e-34 148.3 86 87.2
Hma1.2p1_0247F.1_g101834 Hydrangea macrophylla HOM05D002578 ORTHO05D002698 2.9e-34 148.3 86 87.2
Hma1.2p1_0298F.1_g117736 Hydrangea macrophylla HOM05D002578 ORTHO05D002698 2.9e-34 148.3 86 87.2
Hma1.2p1_0818F.1_g223301 Hydrangea macrophylla HOM05D002578 ORTHO05D002698 2.9e-34 148.3 86 87.2
Nitab4.5_0004430g0050 Nicotiana tabacum HOM05D002578 ORTHO05D002698 1.1e-33 146.4 86 89.5
Oeu060398.1 Olea europaea HOM05D002578 ORTHO05D002698 3.2e-33 144.8 86 87.2
HanXRQChr00c0593g0576411 Helianthus annuus HOM05D002578 ORTHO05D002698 1.2e-32 142.9 86 86.0
HanXRQChr01g0020181 Helianthus annuus HOM05D002578 ORTHO05D005154 1.2e-32 142.9 86 86.0
HanXRQChr04g0127451 Helianthus annuus HOM05D002578 ORTHO05D005154 1.2e-32 142.9 86 86.0
HanXRQChr05g0152531 Helianthus annuus HOM05D002578 ORTHO05D002698 1.2e-32 142.9 86 86.0
HanXRQChr10g0284421 Helianthus annuus HOM05D002578 ORTHO05D005154 1.2e-32 142.9 86 86.0
HanXRQChr11g0321141 Helianthus annuus HOM05D002578 ORTHO05D002698 1.2e-32 142.9 86 86.0
HanXRQChr11g0327011 Helianthus annuus HOM05D002578 ORTHO05D002698 1.2e-32 142.9 86 86.0
HanXRQChr12g0369891 Helianthus annuus HOM05D002578 ORTHO05D005154 1.2e-32 142.9 86 86.0
HanXRQCPg0580221 Helianthus annuus HOM05D002578 ORTHO05D005154 1.2e-32 142.9 86 86.0
Lsat_1_v5_gn_3_113300 Lactuca sativa HOM05D002578 ORTHO05D005154 1.6e-32 142.5 86 84.9
Lsat_1_v5_gn_3_22620 Lactuca sativa HOM05D002578 ORTHO05D005154 1.6e-32 142.5 86 84.9
SGA_v2.0_scaffold907G53717 Striga asiatica HOM05D002578 ORTHO05D002698 3.5e-32 141.4 85 84.7
HanXRQChr16g0500141 Helianthus annuus HOM05D002578 ORTHO05D002698 1.0e-31 139.8 84 86.9
Lsat_1_v5_gn_5_50481 Lactuca sativa HOM05D002578 ORTHO05D002698 1.0e-31 139.8 86 82.6
Hma1.2p1_0104F.1_g050125 Hydrangea macrophylla HOM05D002578 ORTHO05D002698 1.3e-31 139.4 80 87.5
DCAR_032525 Daucus carota HOM05D002578 ORTHO05D002698 3.9e-31 137.9 85 83.5
HanXRQChr16g0503671 Helianthus annuus HOM05D002578 ORTHO05D002698 2.5e-30 135.2 86 79.1
Sed0005264 Sechium edule HOM05D002578 ORTHO05D002698 9.5e-30 133.3 84 81.0
Oeu054717.1 Olea europaea HOM05D002578 ORTHO05D002698 3.6e-29 131.3 84 79.8
Nn070s42374 Nelumbo nucifera HOM05D002578 ORTHO05D002698 4.7e-29 131.0 84 79.8
Nitab4.5_0000382g0100 Nicotiana tabacum HOM05D002578 ORTHO05D002698 8.1e-29 130.2 77 88.3
ATCG00810 Arabidopsis thaliana HOM05D002578 ORTHO05D002698 5.2e-28 127.5 88 77.3
PGR111G0094 Punica granatum HOM05D002578 ORTHO05D002698 5.2e-28 127.5 81 81.5
BolSC35t60673H Brassica oleracea HOM05D002578 ORTHO05D002698 8.9e-28 126.7 88 77.3
AL2G20520 Arabidopsis lyrata HOM05D002578 ORTHO05D002698 2.0e-27 125.6 88 76.1
AL2G21760 Arabidopsis lyrata HOM05D002578 ORTHO05D002698 2.0e-27 125.6 88 76.1
C09p40110 Brassica napus HOM05D002578 ORTHO05D002698 4.4e-27 124.4 88 76.1
BolC9t56906H Brassica oleracea HOM05D002578 ORTHO05D002698 4.4e-27 124.4 88 76.1
AL1G45060 Arabidopsis lyrata HOM05D002578 ORTHO05D002698 5.8e-27 124.0 88 75.0
PSO548G0035 Papaver somniferum HOM05D002578 ORTHO05D002698 9.9e-27 123.2 79 79.7
Gohir.1Z049734 Gossypium hirsutum HOM05D002578 ORTHO05D002698 2.9e-26 121.7 79 77.2
Gorai.009G325200 Gossypium raimondii HOM05D002578 ORTHO05D002698 2.9e-26 121.7 79 77.2
Gohir.D01G102177 Gossypium hirsutum HOM05D002578 ORTHO05D002698 8.3e-26 120.2 79 75.9
Ah.10g027440 Amaranthus hybridus HOM05D002578 ORTHO05D005154 1.1e-25 119.8 82 74.4
Ah.10g029000 Amaranthus hybridus HOM05D002578 ORTHO05D002698 1.1e-25 119.8 82 74.4
Gohir.1Z049366 Gossypium hirsutum HOM05D002578 ORTHO05D002698 2.4e-25 118.6 79 74.7
Nitab4.5_0013360g0010 Nicotiana tabacum HOM05D002578 ORTHO05D005154 3.2e-25 118.2 69 88.4
RcHm_v2.0_CPg0501841 Rosa chinensis HOM05D002578 ORTHO05D002698 3.2e-25 118.2 80 75.0
Gohir.A12G024432 Gossypium hirsutum HOM05D002578 ORTHO05D002698 4.1e-25 117.9 79 75.9
HanXRQChr10g0318021 Helianthus annuus HOM05D002578 ORTHO05D005154 7.1e-25 117.1 69 88.4
RcHm_v2.0_Chr1g0329561 Rosa chinensis HOM05D002578 ORTHO05D002698 1.2e-24 116.3 80 73.8
TPR.G22135 Trifolium pratense HOM05D002578 ORTHO05D002698 1.6e-24 115.9 80 73.8
Lj2P1239T81 Lonicera japonica HOM05D002578 ORTHO05D002698 3.5e-24 114.8 69 85.5
Lju5009P0T59 Lonicera japonica HOM05D002578 ORTHO05D002698 3.5e-24 114.8 69 85.5
CiPaw.03G067300 Carya illinoinensis HOM05D002578 ORTHO05D002698 4.6e-24 114.4 76 75.0
Lj2C1234G17 Lonicera japonica HOM05D002578 ORTHO05D002698 6.0e-24 114.0 69 85.5
Lj2g0018876 Lotus japonicus HOM05D002578 ORTHO05D002698 6.0e-24 114.0 76 76.3
Ca_04123_v3 Cicer arietinum L. HOM05D002578 ORTHO05D002698 1.0e-23 113.2 80 72.5
QL02p048586 Quercus lobata HOM05D002578 ORTHO05D002698 1.0e-23 113.2 76 76.3
Ciclev10005921m.g Citrus clementina HOM05D002578 ORTHO05D002698 1.7e-23 112.5 79 73.4
Cfa007862 Carpinus fangiana HOM05D002578 ORTHO05D002698 2.3e-23 112.1 76 73.7
MBI12_g26681_MAGBIO Magnolia biondii HOM05D002578 ORTHO05D009557 2.3e-23 112.1 80 70.0
HPP92_007212 Vanilla planifolia HOM05D002578 ORTHO05D002698 3.0e-23 111.7 83 72.3
Migut.D01326 Erythranthe guttata HOM05D002578 ORTHO05D002698 3.9e-23 111.3 85 72.9
arahy.Tifrunner.gnm1.ann1.900JYR Arachis hypogaea HOM05D002578 ORTHO05D002698 1.1e-22 109.8 80 71.2
arahy.Tifrunner.gnm1.ann1.MT7PBJ Arachis hypogaea HOM05D002578 ORTHO05D002698 1.1e-22 109.8 80 71.2
Lj1g0008959 Lotus japonicus HOM05D002578 ORTHO05D002698 1.1e-22 109.8 76 72.4
Lalb_Chr03g0038431 Lupinus albus HOM05D002578 ORTHO05D002698 1.5e-22 109.4 80 68.8
BolC7t41707H Brassica oleracea HOM05D002578 ORTHO05D002698 2.5e-22 108.6 67 82.1
Medtr7g100410 Medicago truncatula HOM05D002578 ORTHO05D002698 2.5e-22 108.6 80 71.2
VMungo0464G0334 Vigna mungo HOM05D002578 ORTHO05D002698 3.3e-22 108.2 79 69.6
Glyma.05G001100 Glycine max HOM05D002578 ORTHO05D002698 4.3e-22 107.8 79 69.6
Psat1g052200 Pisum sativum HOM05D002578 ORTHO05D002698 5.6e-22 107.5 76 68.4
Phvul.004G001400 Phaseolus vulgaris HOM05D002578 ORTHO05D002698 7.3e-22 107.1 79 69.6
BolSC29t60613H Brassica oleracea HOM05D002578 ORTHO05D002698 9.5e-22 106.7 67 82.1
Glyma.19G001100 Glycine max HOM05D002578 ORTHO05D002698 2.1e-21 105.5 79 68.4
Lsat_1_v5_gn_5_168080 Lactuca sativa HOM05D002578 ORTHO05D002698 2.1e-21 105.5 86 66.3
Atru.chr11.440 Acer truncatum HOM05D002578 ORTHO05D005154 4.7e-21 104.4 69 79.7
Nn4g25227 Nelumbo nucifera HOM05D002578 ORTHO05D002698 2.4e-20 102.1 84 66.7
Ah.10g027310 Amaranthus hybridus HOM05D002578 ORTHO05D002698 1.2e-19 99.8 63 79.4
FAN09G4709 Fragaria x ananassa HOM05D002578 ORTHO05D002698 2.0e-19 99.0 80 67.5
Gorai.001G190500 Gossypium raimondii HOM05D002578 ORTHO05D002698 4.4e-19 97.8 69 71.0
Sc25g0002070 Simmondsia chinensis HOM05D002578 ORTHO05D005154 5.8e-19 97.4 64 75.0
Os12g0488300 Oryza sativa ssp. japonica HOM05D002578 ORTHO05D002698 2.9e-18 95.1 80 61.2
ClCG04G000500 Citrullus lanatus HOM05D002578 ORTHO05D002698 1.0e-15 86.7 51 86.3
Zm00001eb437150 Zea mays HOM05D002578 ORTHO05D002698 1.0e-15 86.7 82 57.3
HanXRQChr00c0394g0574521 Helianthus annuus HOM05D002578 ORTHO05D002698 1.7e-15 85.9 54 81.5
HanXRQChr00c0349g0573961 Helianthus annuus HOM05D002578 ORTHO05D002698 1.1e-14 83.2 47 89.4
Zm00001eb442200 Zea mays HOM05D002578 ORTHO05D002698 1.1e-14 83.2 65 66.2
Peaxi162Scf00362g00547 Petunia axillaris HOM05D002578 ORTHO05D002698 3.3e-14 81.6 44 95.5
RcHm_v2.0_Chr6g0286361 Rosa chinensis HOM05D002578 ORTHO05D002698 5.6e-14 80.9 80 57.5
Solyc09g050066.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 5.6e-14 80.9 54 75.9
Hund29685 Selenicereus undatus HOM05D002578 ORTHO05D009557 1.6e-13 79.3 84 51.2
Hund30542 Selenicereus undatus HOM05D002578 ORTHO05D009557 1.6e-13 79.3 84 51.2
Hund31295 Selenicereus undatus HOM05D002578 ORTHO05D009557 1.6e-13 79.3 84 51.2
Solyc12g035880.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 1.6e-13 79.3 70 57.1
Gohir.A04G116550 Gossypium hirsutum HOM05D002578 ORTHO05D002698 1.4e-12 76.3 57 64.9
SMO086G0008 Selaginella moellendorffii HOM05D002578 ORTHO05D002698 2.4e-12 75.5 81 50.6
Zm00001eb435110 Zea mays HOM05D002578 ORTHO05D002698 2.6e-11 72.0 62 61.3
Cre13.g580850 Chlamydomonas reinhardtii HOM05D002578 ORTHO05D002698 3.4e-11 71.6 60 58.3
MCO09G075 Micromonas commoda HOM05D002578 ORTHO05D002698 3.4e-11 71.6 67 52.2
Nitab4.5_0004376g0170 Nicotiana tabacum HOM05D002578 ORTHO05D009557 4.4e-11 71.2 52 75.0
Eucgr.A01255 Eucalyptus grandis HOM05D002578 ORTHO05D002698 1.4e-09 66.2 42 78.6
RcHm_v2.0_Chr5g0025841 Rosa chinensis HOM05D002578 ORTHO05D002698 1.4e-09 66.2 44 77.3
CARHR141570 Cardamine hirsuta HOM05D002578 ORTHO05D002698 5.4e-09 64.3 45 71.1
Sc16g0004470 Simmondsia chinensis HOM05D000540 ORTHO05D000681 3.5e-08 61.6 40 75.0
CiPaw.11G073000 Carya illinoinensis HOM05D002578 ORTHO05D002698 1.7e-07 59.3 38 68.4
BraSC143t45639Z Brassica rapa HOM05D002578 ORTHO05D002698 3.0e-07 58.5 68 54.4


User provided reference genes

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