Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 4.0e-251 870.9 436 100.0
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 7.7e-242 840.1 437 96.8
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 7.9e-231 803.5 436 92.2
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 2.1e-215 752.3 437 86.7
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 2.7e-215 751.9 437 87.0
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 2.3e-214 748.8 423 88.2
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 1.7e-209 732.6 423 87.7
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 1.6e-175 619.8 431 71.7
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 2.0e-165 586.3 434 67.1
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 8.4e-164 580.9 446 65.5
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 3.2e-163 578.9 398 71.9
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 1.3e-161 573.5 417 68.3
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 3.0e-161 572.4 435 66.2
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 1.5e-160 570.1 330 84.8
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 1.9e-160 569.7 434 65.4
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 2.1e-159 566.2 429 66.0
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 6.2e-159 564.7 430 63.5
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 2.0e-157 559.7 397 69.5
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 3.4e-157 558.9 430 64.2
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 4.4e-157 558.5 433 64.7
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 5.8e-157 558.1 430 65.3
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 1.3e-156 557.0 432 65.7
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 3.8e-156 555.4 435 63.9
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 1.2e-154 550.4 436 63.8
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 3.5e-154 548.9 433 64.9
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 7.8e-154 547.7 435 63.2
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 1.0e-153 547.4 423 63.6
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 1.3e-153 547.0 429 63.6
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 3.3e-152 542.3 429 63.4
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 4.3e-152 542.0 429 62.7
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 8.1e-151 537.7 435 61.8
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 1.8e-150 536.6 423 63.1
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 3.1e-150 535.8 431 63.1
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 9.0e-150 534.3 433 63.0
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 4.5e-149 531.9 438 61.0
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 4.5e-149 531.9 422 64.0
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 5.8e-149 531.6 403 65.5
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 5.8e-149 531.6 408 64.5
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 2.2e-148 529.6 435 60.2
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 3.8e-148 528.9 404 65.1
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 4.9e-148 528.5 433 62.1
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 6.4e-148 528.1 413 64.4
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 1.9e-147 526.6 412 62.6
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 4.2e-147 525.4 415 63.4
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 9.3e-147 524.2 409 63.6
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 3.5e-146 522.3 415 62.9
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 7.9e-146 521.2 404 63.9
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 7.9e-146 521.2 427 61.1
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 1.0e-145 520.8 415 63.4
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 2.3e-145 519.6 420 62.9
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 6.7e-145 518.1 399 63.7
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 1.1e-144 517.3 421 62.5
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 1.1e-144 517.3 403 63.0
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 1.9e-144 516.5 420 62.4
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 1.9e-144 516.5 430 60.2
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 3.3e-144 515.8 409 63.1
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 4.3e-144 515.4 426 60.1
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 7.4e-144 514.6 430 60.7
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 9.6e-144 514.2 405 62.2
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 2.8e-143 512.7 418 60.8
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 1.8e-142 510.0 409 61.9
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 9.0e-142 507.7 440 58.0
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 1.2e-141 507.3 428 59.1
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 1.5e-141 506.9 411 61.1
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 1.5e-141 506.9 399 64.4
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 2.6e-141 506.1 411 60.6
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 6.4e-140 501.5 430 59.1
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 1.9e-139 500.0 438 58.7
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 4.2e-139 498.8 409 61.6
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 2.1e-138 496.5 417 60.7
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 4.6e-138 495.4 417 60.4
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 4.6e-138 495.4 410 60.7
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 6.0e-138 495.0 417 60.4
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 3.9e-137 492.3 417 60.4
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 6.2e-135 485.0 472 55.5
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 2.4e-134 483.0 448 56.2
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 1.2e-130 470.7 433 55.0
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.3e-128 462.6 424 59.0
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 1.3e-127 460.7 483 52.2
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 4.8e-127 458.8 397 54.9
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 1.0e-121 441.0 405 53.1
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.3e-121 439.9 407 54.8
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 4.3e-120 435.6 344 63.1
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 1.7e-119 433.7 728 39.0
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 3.8e-116 422.5 408 51.5
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 3.6e-114 416.0 329 63.2
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 9.7e-112 407.9 408 55.4
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 2.8e-111 406.4 303 63.7
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 2.0e-109 400.2 334 59.0
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.7e-108 397.1 437 46.2
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 3.9e-105 386.0 306 60.8
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 5.2e-105 385.6 368 49.7
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 6.3e-103 378.6 365 51.2
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 2.2e-100 370.2 275 66.9
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 6.1e-98 362.1 293 61.4
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 3.0e-97 359.8 412 49.3
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 6.8e-97 358.6 273 65.6
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 2.7e-90 336.7 279 59.9
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 8.0e-90 335.1 404 44.8
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 7.5e-88 328.6 280 58.9
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 2.7e-85 320.1 248 61.3
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 9.5e-83 311.6 380 47.6
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 6.3e-79 298.9 349 48.4
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 7.5e-64 248.8 407 39.6
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.7e-63 247.7 211 61.1
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 6.0e-61 239.2 187 64.7
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 8.6e-60 235.3 181 65.7
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 1.2e-56 224.9 173 60.1
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 3.7e-55 219.9 180 63.9
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 3.0e-52 210.3 195 55.9
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.1e-46 191.8 133 70.7
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 3.2e-46 190.3 147 63.9
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 1.7e-44 184.5 206 49.0
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.2e-40 171.8 200 48.0
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 6.9e-33 146.0 108 71.3
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 9.0e-33 145.6 107 66.4
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 4.6e-29 133.3 101 71.3
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 2.8e-26 124.0 192 35.9
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 9.0e-25 119.0 99 66.7
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 2.1e-21 107.8 389 24.4
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 2.7e-21 107.5 413 24.9
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 6.3e-18 96.3 98 56.1
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 1.1e-17 95.5 130 46.2
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 1.2e-13 82.0 58 72.4
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 2.9e-07 60.8 46 58.7


User provided reference genes

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