Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.2e-104 381.7 189 100.0
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 9.5e-80 300.4 177 89.8
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 9.5e-80 300.4 177 89.8
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 9.5e-80 300.4 177 89.8
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 9.5e-80 300.4 177 89.8
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 8.0e-79 297.4 181 87.3
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 1.8e-78 296.2 177 87.6
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 5.2e-78 294.7 177 88.7
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 1.5e-77 293.1 178 86.5
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 2.0e-77 292.7 177 87.6
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 2.8e-76 288.9 177 87.0
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 2.4e-75 285.8 177 85.9
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 9.2e-75 283.9 177 84.7
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 1.2e-74 283.5 177 85.9
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 2.0e-74 282.7 177 85.9
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 2.0e-74 282.7 177 85.9
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 2.0e-74 282.7 177 85.9
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 2.0e-74 282.7 177 85.9
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 2.0e-74 282.7 177 85.9
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 2.0e-74 282.7 177 85.9
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 5.9e-74 281.2 177 85.3
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 5.9e-74 281.2 177 85.3
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 1.0e-73 280.4 177 85.3
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 1.9e-72 276.2 177 82.5
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 3.3e-72 275.4 177 83.6
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 3.3e-72 275.4 177 83.6
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 5.6e-72 274.6 178 83.1
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 9.5e-72 273.9 176 83.5
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 1.2e-71 273.5 177 83.1
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 3.1e-70 268.9 177 83.6
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 1.7e-68 263.1 164 84.8
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 1.6e-63 246.5 176 77.8
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.4e-61 238.8 142 88.0
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 8.3e-60 234.2 175 74.3
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 3.0e-57 225.7 169 75.1
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 6.2e-55 218.0 130 85.4
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 8.1e-55 217.6 130 85.4
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 3.1e-54 215.7 153 76.5
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 9.2e-51 204.1 119 89.1
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 1.5e-45 186.8 121 78.5
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 1.4e-43 180.3 117 82.9
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 2.1e-42 176.4 127 74.8
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 1.4e-38 163.7 99 83.8
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 1.5e-32 143.7 84 88.1
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 4.3e-32 142.1 96 78.1
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 4.0e-30 135.6 120 65.8
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 5.1e-25 118.6 69 88.4
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.6e-23 113.6 68 86.8
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 2.1e-23 113.2 78 76.9
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 2.4e-22 109.8 69 82.6
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 3.8e-20 102.4 66 81.8
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 8.4e-20 101.3 59 88.1
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 2.7e-18 96.3 132 47.7
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 1.9e-16 90.1 57 86.0
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 2.5e-16 89.7 69 72.5
Solyc12g035890.3 Solanum lycopersicum HOM05D000964 ORTHO05D004047 5.3e-14 82.0 58 70.7
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 2.9e-12 76.3 61 72.1
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 1.6e-07 60.5 35 91.4


User provided reference genes

Program Settings